RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
BRCC3-201ENST00000330045 C22orf24Q9Y442 160 aa10.73□□□□□ -0.69
BRCC3-201ENST00000330045 CCL18P55774 89 aa10.72□□□□□ -0.69
BRCC3-201ENST00000330045 SPATA3Q8NHX4 192 aa10.72□□□□□ -0.69
BRCC3-201ENST00000330045 Q9HAA7 133 aa10.72□□□□□ -0.69
BRCC3-201ENST00000330045 TRBV7-7A0A0K0K1E9 115 aa10.72□□□□□ -0.69
BRCC3-201ENST00000330045 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
BRCC3-201ENST00000330045 PFN2P35080 140 aa10.71□□□□□ -0.69
BRCC3-201ENST00000330045 KIR2DL5BQ8NHK3 375 aa10.71□□□□□ -0.69
BRCC3-201ENST00000330045 SMIM11BQ8TCY0 68 aa10.71□□□□□ -0.69
BRCC3-201ENST00000330045 BAHCC1Q9P281 2608 aa10.71□□□□□ -0.7
BRCC3-201ENST00000330045 B5MCH6 92 aa10.7□□□□□ -0.7
BRCC3-201ENST00000330045 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
BRCC3-201ENST00000330045 MALP21145 153 aa10.69□□□□□ -0.7
BRCC3-201ENST00000330045 CCDC179H3BU77 68 aa10.69□□□□□ -0.7
BRCC3-201ENST00000330045 GYPEP15421 78 aa10.69□□□□□ -0.7
BRCC3-201ENST00000330045 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
BRCC3-201ENST00000330045 INAFM2P0DMQ5 153 aa10.68□□□□□ -0.7
BRCC3-201ENST00000330045 LINC00612Q8N6U2 182 aa10.68□□□□□ -0.7
BRCC3-201ENST00000330045 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
BRCC3-201ENST00000330045 DNAL4O96015 105 aa10.67□□□□□ -0.7
BRCC3-201ENST00000330045 A0A087WYN8 130 aa10.67□□□□□ -0.7
BRCC3-201ENST00000330045 H0YGX0 51 aa10.67□□□□□ -0.7
BRCC3-201ENST00000330045 PAX4O43316 350 aa10.67□□□□□ -0.7
BRCC3-201ENST00000330045 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
BRCC3-201ENST00000330045 C11orf68Q9H3H3 251 aaKnown RBP10.67□□□□□ -0.7
BRCC3-201ENST00000330045 XCL1P47992 114 aa10.66□□□□□ -0.7
BRCC3-201ENST00000330045 SS18Q15532 418 aa10.66□□□□□ -0.7
BRCC3-201ENST00000330045 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
BRCC3-201ENST00000330045 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
BRCC3-201ENST00000330045 SS18L2Q9UHA2 77 aa10.66□□□□□ -0.7
BRCC3-201ENST00000330045 FBN1P35555 2871 aaKnown RBP10.65□□□□□ -0.7
BRCC3-201ENST00000330045 SDIM1Q6ZPB5 146 aa10.65□□□□□ -0.7
BRCC3-201ENST00000330045 OR13C6PQ8NH95 151 aa10.65□□□□□ -0.7
BRCC3-201ENST00000330045 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
BRCC3-201ENST00000330045 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
BRCC3-201ENST00000330045 ATP5G1P05496 136 aa10.63□□□□□ -0.71
BRCC3-201ENST00000330045 X6R8D5 127 aa10.63□□□□□ -0.71
BRCC3-201ENST00000330045 A0A096LPF7 62 aa10.63□□□□□ -0.71
BRCC3-201ENST00000330045 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
BRCC3-201ENST00000330045 Q8IZM0 81 aa10.63□□□□□ -0.71
BRCC3-201ENST00000330045 LINC00482Q8N8I6 264 aa10.62□□□□□ -0.71
BRCC3-201ENST00000330045 FAM236AA0A1B0GUQ0 79 aa10.61□□□□□ -0.71
BRCC3-201ENST00000330045 FAM236BA0A1B0GV22 79 aa10.61□□□□□ -0.71
BRCC3-201ENST00000330045 SMIM9A6NGZ8 99 aa10.61□□□□□ -0.71
BRCC3-201ENST00000330045 LECT2O14960 151 aa10.61□□□□□ -0.71
BRCC3-201ENST00000330045 NBEAL2Q6ZNJ1 2754 aa10.6□□□□□ -0.71
BRCC3-201ENST00000330045 C9orf129Q5T035 196 aaKnown RBP10.6□□□□□ -0.71
BRCC3-201ENST00000330045 LINC01561Q8N1V8 128 aa10.6□□□□□ -0.71
BRCC3-201ENST00000330045 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
BRCC3-201ENST00000330045 OBSCN-AS1Q96MR7 158 aa10.58□□□□□ -0.72
BRCC3-201ENST00000330045 LINC00269Q8N2A0 174 aa10.57□□□□□ -0.72
BRCC3-201ENST00000330045 LYRM9A8MSI8 78 aa10.57□□□□□ -0.72
BRCC3-201ENST00000330045 CXCL5P42830 114 aa10.57□□□□□ -0.72
BRCC3-201ENST00000330045 STAB1Q9NY15 2570 aa10.57□□□□□ -0.72
BRCC3-201ENST00000330045 SLPIP03973 132 aa10.56□□□□□ -0.72
BRCC3-201ENST00000330045 CD164L2Q6UWJ8 174 aa10.56□□□□□ -0.72
BRCC3-201ENST00000330045 KIAA0087Q14695 138 aa10.55□□□□□ -0.72
BRCC3-201ENST00000330045 KLK5Q9Y337 293 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-201ENST00000330045 CFAP161Q6P656 301 aa10.55□□□□□ -0.72
BRCC3-201ENST00000330045 ORMDL1Q9P0S3 153 aa10.55□□□□□ -0.72
BRCC3-201ENST00000330045 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
BRCC3-201ENST00000330045 DEFB4AO15263 64 aa10.54□□□□□ -0.72
BRCC3-201ENST00000330045 PRR3P79522 188 aaKnown RBP10.54□□□□□ -0.72
BRCC3-201ENST00000330045 CHCHD10Q8WYQ3 142 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-201ENST00000330045 NCR3O14931 201 aa10.53□□□□□ -0.72
BRCC3-201ENST00000330045 ANGP03950 147 aaKnown RBP10.53□□□□□ -0.72
BRCC3-201ENST00000330045 COX17Q14061 63 aa10.53□□□□□ -0.72
BRCC3-201ENST00000330045 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
BRCC3-201ENST00000330045 NDUFC2O95298 119 aa10.52□□□□□ -0.72
BRCC3-201ENST00000330045 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.72
BRCC3-201ENST00000330045 REG3AQ06141 175 aa10.52□□□□□ -0.72
BRCC3-201ENST00000330045 DEFB135Q30KP9 77 aa10.52□□□□□ -0.72
BRCC3-201ENST00000330045 Q8N3U1 123 aa10.52□□□□□ -0.73
BRCC3-201ENST00000330045 C9orf66Q5T8R8 295 aa10.51□□□□□ -0.73
BRCC3-201ENST00000330045 MAST4O15021 2626 aa10.51□□□□□ -0.73
BRCC3-201ENST00000330045 CMYA5Q8N3K9 4069 aa10.51□□□□□ -0.73
BRCC3-201ENST00000330045 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 DAD1P61803 113 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 TMEM126AQ9H061 195 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 A0A1B0GX51 115 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 LINC00167Q96N53 147 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 LINC00846Q9NV44 126 aa10.5□□□□□ -0.73
BRCC3-201ENST00000330045 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
BRCC3-201ENST00000330045 Q8N814 137 aa10.49□□□□□ -0.73
BRCC3-201ENST00000330045 KRTAP24-1Q3LI83 254 aa10.48□□□□□ -0.73
BRCC3-201ENST00000330045 ANK2Q01484 3957 aa10.48□□□□□ -0.73
BRCC3-201ENST00000330045 APOC4P55056 127 aa10.48□□□□□ -0.73
BRCC3-201ENST00000330045 Q6JHZ5 121 aa10.46□□□□□ -0.73
BRCC3-201ENST00000330045 C3orf22Q8N5N4 141 aa10.46□□□□□ -0.73
BRCC3-201ENST00000330045 C3orf56Q8N813 242 aa10.46□□□□□ -0.74
BRCC3-201ENST00000330045 CELA1Q9UNI1 258 aa10.46□□□□□ -0.74
BRCC3-201ENST00000330045 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
BRCC3-201ENST00000330045 IGKV3D-7A0A0C4DH55 119 aa10.45□□□□□ -0.74
BRCC3-201ENST00000330045 JMJD7-PLA2G4BH0Y9G9 81 aa10.45□□□□□ -0.74
BRCC3-201ENST00000330045 TMEM256-PLSCR3K7ERE1 68 aa10.45□□□□□ -0.74
BRCC3-201ENST00000330045 UQCRQO14949 82 aa10.45□□□□□ -0.74
BRCC3-201ENST00000330045 CCKP06307 115 aa10.45□□□□□ -0.74
BRCC3-201ENST00000330045 HIST1H4AP62805 103 aaKnown RBP10.45□□□□□ -0.74
BRCC3-201ENST00000330045 Q8NDZ9 215 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms