RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 C10orf25Q5T742 122 aa8.69□□□□□ -1.02
RPAIN-201ENST00000327154 UNQ6190/PRO20217Q6UXQ8 127 aa8.69□□□□□ -1.02
RPAIN-201ENST00000327154 PHF5AQ7RTV0 110 aaKnown RBP8.69□□□□□ -1.02
RPAIN-201ENST00000327154 BAGE3Q86Y29 109 aa8.69□□□□□ -1.02
RPAIN-201ENST00000327154 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
RPAIN-201ENST00000327154 A0A087WZ39 114 aa8.68□□□□□ -1.02
RPAIN-201ENST00000327154 F8WDY8 70 aa8.68□□□□□ -1.02
RPAIN-201ENST00000327154 NDUFA1O15239 70 aa8.68□□□□□ -1.02
RPAIN-201ENST00000327154 CHCHD1Q96BP2 118 aaKnown RBP8.68□□□□□ -1.02
RPAIN-201ENST00000327154 GEMIN7Q9H840 131 aaKnown RBP8.68□□□□□ -1.02
RPAIN-201ENST00000327154 TNXBP22105 4242 aa8.67□□□□□ -1.02
RPAIN-201ENST00000327154 NDUFA6P56556 154 aa8.67□□□□□ -1.02
RPAIN-201ENST00000327154 HERVK_113P63121 156 aa8.67□□□□□ -1.02
RPAIN-201ENST00000327154 SEC11AP67812 179 aa8.67□□□□□ -1.02
RPAIN-201ENST00000327154 PMVKQ15126 192 aa8.67□□□□□ -1.02
RPAIN-201ENST00000327154 PDZD11Q5EBL8 140 aa8.66□□□□□ -1.02
RPAIN-201ENST00000327154 C1orf137Q5JT78 98 aa8.66□□□□□ -1.02
RPAIN-201ENST00000327154 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
RPAIN-201ENST00000327154 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
RPAIN-201ENST00000327154 C6orf48Q9UBA6 75 aa8.66□□□□□ -1.02
RPAIN-201ENST00000327154 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 HSBP1O75506 76 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 ATP5LO75964 103 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 KIAA0087Q14695 138 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 CDKN2A-AS1Q9UH64 79 aa8.65□□□□□ -1.02
RPAIN-201ENST00000327154 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
RPAIN-201ENST00000327154 TLX1NBP0CAT3 122 aa8.64□□□□□ -1.03
RPAIN-201ENST00000327154 GAGE2EQ4V326 116 aa8.64□□□□□ -1.03
RPAIN-201ENST00000327154 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-201ENST00000327154 GAGE2DQ9UEU5 116 aa8.64□□□□□ -1.03
RPAIN-201ENST00000327154 SERF1AO75920 110 aa8.63□□□□□ -1.03
RPAIN-201ENST00000327154 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
RPAIN-201ENST00000327154 FAM19A2Q8N3H0 131 aa8.63□□□□□ -1.03
RPAIN-201ENST00000327154 TOMM7Q9P0U1 55 aa8.63□□□□□ -1.03
RPAIN-201ENST00000327154 PRSS2P07478 247 aa8.62□□□□□ -1.03
RPAIN-201ENST00000327154 C2orf82Q6UX34 121 aa8.62□□□□□ -1.03
RPAIN-201ENST00000327154 FAM19A5Q7Z5A7 132 aaPredicted RBP8.62□□□□□ -1.03
RPAIN-201ENST00000327154 KRTAP11-1Q8IUC1 163 aa8.62□□□□□ -1.03
RPAIN-201ENST00000327154 ATP6V1G1O75348 118 aa8.61□□□□□ -1.03
RPAIN-201ENST00000327154 IGLV7-43P04211 117 aa8.61□□□□□ -1.03
RPAIN-201ENST00000327154 LINC00310P59036 64 aa8.61□□□□□ -1.03
RPAIN-201ENST00000327154 IGLC3P0DOY3 106 aa8.6□□□□□ -1.03
RPAIN-201ENST00000327154 KRTAP7-1Q8IUC3 87 aa8.6□□□□□ -1.03
RPAIN-201ENST00000327154 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
RPAIN-201ENST00000327154 IGLV5-45A0A087WSX0 123 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 SPINK8P0C7L1 97 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 S100A1P23297 94 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 CKS1BP61024 79 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 Q8IZM0 81 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 DIRC1Q969H9 104 aa8.59□□□□□ -1.03
RPAIN-201ENST00000327154 LRP2P98164 4655 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 H3BRM9 83 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 NUPR1O60356 82 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
RPAIN-201ENST00000327154 CHTOPQ9Y3Y2 248 aaKnown RBP8.58□□□□□ -1.04
RPAIN-201ENST00000327154 NDUFC2-KCTD14E9PQ53 114 aa8.57□□□□□ -1.04
RPAIN-201ENST00000327154 H0Y8G0 127 aa8.57□□□□□ -1.04
RPAIN-201ENST00000327154 M0QXV9 152 aa8.57□□□□□ -1.04
RPAIN-201ENST00000327154 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
RPAIN-201ENST00000327154 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
RPAIN-201ENST00000327154 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
RPAIN-201ENST00000327154 C11orf86A6NJI1 115 aa8.56□□□□□ -1.04
RPAIN-201ENST00000327154 FABP4P15090 132 aa8.56□□□□□ -1.04
RPAIN-201ENST00000327154 UBE2BP63146 152 aa8.56□□□□□ -1.04
RPAIN-201ENST00000327154 PRR26Q8N8Z3 221 aa8.56□□□□□ -1.04
RPAIN-201ENST00000327154 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
RPAIN-201ENST00000327154 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
RPAIN-201ENST00000327154 H0Y9J4 135 aa8.55□□□□□ -1.04
RPAIN-201ENST00000327154 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
RPAIN-201ENST00000327154 HSPB8Q9UJY1 196 aa8.54□□□□□ -1.04
RPAIN-201ENST00000327154 F8VRH5 84 aa8.53□□□□□ -1.04
RPAIN-201ENST00000327154 CXCL5P42830 114 aa8.53□□□□□ -1.04
RPAIN-201ENST00000327154 RNF213Q63HN8 5207 aa8.52□□□□□ -1.04
RPAIN-201ENST00000327154 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
RPAIN-201ENST00000327154 XAGE1AQ9HD64 81 aa8.51□□□□□ -1.05
RPAIN-201ENST00000327154 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
RPAIN-201ENST00000327154 C22orf24Q9Y442 160 aa8.5□□□□□ -1.05
RPAIN-201ENST00000327154 MAP1LC3CQ9BXW4 147 aa8.49□□□□□ -1.05
RPAIN-201ENST00000327154 IGLV1-50A0A075B6I6 118 aa8.48□□□□□ -1.05
RPAIN-201ENST00000327154 TMEM223A0PJW6 202 aa8.48□□□□□ -1.05
RPAIN-201ENST00000327154 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
RPAIN-201ENST00000327154 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
RPAIN-201ENST00000327154 ZNF861PO60384 105 aa8.46□□□□□ -1.06
RPAIN-201ENST00000327154 DPM2O94777 84 aa8.46□□□□□ -1.06
RPAIN-201ENST00000327154 PLNP26678 52 aa8.46□□□□□ -1.06
RPAIN-201ENST00000327154 COA6Q5JTJ3 125 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms