RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 USP17L23D6RBM5 183 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 CXCL5P42830 114 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 BATFQ16520 125 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 C1orf134Q5TEV5 83 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 SFTA2Q6UW10 78 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 UQCR10Q9UDW1 63 aa6.76□□□□□ -1.33
VIPAS39-201ENST00000327028 HIGD2BQ4VC39 106 aa6.75□□□□□ -1.33
VIPAS39-201ENST00000327028 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
VIPAS39-201ENST00000327028 TMEM238C9JI98 176 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 CKS1BP61024 79 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 HERV-K104P63124 156 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 NTN5Q8WTR8 489 aaPredicted RBP6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 MIEN1Q9BRT3 115 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 F8WDY8 70 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 C2orf48Q96LS8 159 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 DNAH2Q9P225 4427 aa6.74□□□□□ -1.33
VIPAS39-201ENST00000327028 SACSQ9NZJ4 4579 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 LECT2O14960 151 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 WFDC2Q14508 124 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 C2orf82Q6UX34 121 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 LINC00526Q96FQ7 95 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 LRCOL1A6NCL2 159 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 C14orf177Q52M58 125 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
VIPAS39-201ENST00000327028 A0A0J9YXY3 114 aa6.72□□□□□ -1.33
VIPAS39-201ENST00000327028 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
VIPAS39-201ENST00000327028 SCGB1D4Q6XE38 83 aa6.72□□□□□ -1.33
VIPAS39-201ENST00000327028 C2orf91Q6ZV80 131 aa6.72□□□□□ -1.33
VIPAS39-201ENST00000327028 CAMK2N2Q96S95 79 aa6.72□□□□□ -1.33
VIPAS39-201ENST00000327028 UNQ6190/PRO20217Q6UXQ8 127 aa6.71□□□□□ -1.34
VIPAS39-201ENST00000327028 HIGD1BQ9P298 99 aa6.71□□□□□ -1.34
VIPAS39-201ENST00000327028 TIMM17BO60830 172 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 HNRNPA3P51991 378 aaKnown RBP6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 C10orf25Q5T742 122 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 A0A087WTM6 91 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 TRBV30A0A0K0K1B3 111 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 DNAH17Q9UFH2 4485 aa6.7□□□□□ -1.34
VIPAS39-201ENST00000327028 A6NJY4 79 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 MEIG1Q5JSS6 88 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 Q6ZRU5 148 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 C6orf48Q9UBA6 75 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 RTL8CO15255 209 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 LITAFQ99732 161 aa6.69□□□□□ -1.34
VIPAS39-201ENST00000327028 HYDINQ4G0P3 5121 aa6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 SLPIP03973 132 aa6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 CNBPP62633 177 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 Q8N814 137 aa6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 SMIM13P0DJ93 91 aa6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 FRAS1Q86XX4 4008 aa6.68□□□□□ -1.34
VIPAS39-201ENST00000327028 COX17Q14061 63 aa6.67□□□□□ -1.34
VIPAS39-201ENST00000327028 COL5A1-AS1Q5SY13 56 aa6.67□□□□□ -1.34
VIPAS39-201ENST00000327028 C9orf116Q5BN46 136 aaPredicted RBP6.67□□□□□ -1.34
VIPAS39-201ENST00000327028 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
VIPAS39-201ENST00000327028 SPANXCQ9NY87 97 aa6.67□□□□□ -1.34
VIPAS39-201ENST00000327028 ADAMTSL4-AS1Q5T5F5 129 aa6.66□□□□□ -1.34
VIPAS39-201ENST00000327028 PFN2P35080 140 aa6.66□□□□□ -1.34
VIPAS39-201ENST00000327028 LINC00158P58513 81 aa6.66□□□□□ -1.34
VIPAS39-201ENST00000327028 TNP2Q05952 138 aa6.66□□□□□ -1.34
VIPAS39-201ENST00000327028 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 HSD52Q0P140 79 aa6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 TAL2Q16559 108 aa6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 Q6ZVH6 145 aa6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 HIST1H4GQ99525 98 aa6.65□□□□□ -1.34
VIPAS39-201ENST00000327028 SRSF9Q13242 221 aaKnown RBP eCLIP6.64□□□□□ -1.35
VIPAS39-201ENST00000327028 MIR7-3HGQ8N6C7 128 aa6.64□□□□□ -1.35
VIPAS39-201ENST00000327028 DAND5Q8N907 189 aa6.64□□□□□ -1.35
VIPAS39-201ENST00000327028 RYR2Q92736 4967 aa6.64□□□□□ -1.35
VIPAS39-201ENST00000327028 NDUFC2-KCTD14E9PQ53 114 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 TLX1NBP0CAT3 122 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 UBE2V1Q13404 147 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 IFITM1P13164 125 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 KMT2CQ8NEZ4 4911 aaKnown RBP6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
VIPAS39-201ENST00000327028 GCSHP23434 173 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 LINC00336Q6ZUF6 198 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 LOC107984640A0A0U1RRK4 108 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 CEND1Q8N111 149 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 C9orf163Q8N9P6 203 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 SND1-IT1Q9HBX3 110 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 PKIGQ9Y2B9 76 aa6.62□□□□□ -1.35
VIPAS39-201ENST00000327028 NPC2P61916 151 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 SOSTDC1Q6X4U4 206 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 Q6ZRP5 223 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 MUSTN1Q8IVN3 82 aa6.61□□□□□ -1.35
VIPAS39-201ENST00000327028 LOC107984156A0A0G2JMH3 177 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms