RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 COX8CQ7Z4L0 72 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 POM121L12Q8N7R1 296 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 ZFHX3Q15911 3703 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 CDPF1Q6NVV7 123 aa6.41□□□□□ -1.38
CD28-201ENST00000324106 WFDC2Q14508 124 aa6.4□□□□□ -1.38
CD28-201ENST00000324106 WWC2-AS2Q96NR7 200 aa6.4□□□□□ -1.38
CD28-201ENST00000324106 CFAP54Q96N23 3096 aa6.4□□□□□ -1.39
CD28-201ENST00000324106 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.39
CD28-201ENST00000324106 LINC01561Q8N1V8 128 aa6.4□□□□□ -1.39
CD28-201ENST00000324106 HTTP42858 3142 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 FAM236AA0A1B0GUQ0 79 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 FAM236BA0A1B0GV22 79 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 Q6JHZ5 121 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 REG3GQ6UW15 175 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 MGAM2Q2M2H8 2515 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 MDFIQ99750 246 aa6.39□□□□□ -1.39
CD28-201ENST00000324106 H3BNG1 76 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 EXPH5Q8NEV8 1989 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 TAX1BP3O14907 124 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 IGIPA6NJ69 53 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 COX6A2Q02221 97 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 LST1O00453 97 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 LINC01556Q5JQF7 62 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 C1orf137Q5JT78 98 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 WFDC10BQ8IUB3 73 aa6.38□□□□□ -1.39
CD28-201ENST00000324106 K7ERS5 55 aa6.37□□□□□ -1.39
CD28-201ENST00000324106 SLPIP03973 132 aa6.37□□□□□ -1.39
CD28-201ENST00000324106 IGLV4-60A0A075B6I1 120 aa6.37□□□□□ -1.39
CD28-201ENST00000324106 TRIAP1O43715 76 aa6.37□□□□□ -1.39
CD28-201ENST00000324106 TNRC18O15417 2968 aaPredicted RBP6.36□□□□□ -1.39
CD28-201ENST00000324106 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
CD28-201ENST00000324106 MAST4O15021 2626 aa6.36□□□□□ -1.39
CD28-201ENST00000324106 AGRNO00468 2067 aa6.36□□□□□ -1.39
CD28-201ENST00000324106 A8MZ25 164 aa6.36□□□□□ -1.39
CD28-201ENST00000324106 HRCT1Q6UXD1 115 aa6.36□□□□□ -1.39
CD28-201ENST00000324106 FAM229AH3BQW9 127 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 C3orf84H3BNL1 204 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 PRYO14603 147 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 SMIM11BQ8TCY0 68 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 TEX49A0A1B0GTD5 131 aa6.35□□□□□ -1.39
CD28-201ENST00000324106 NDUFV3P56181 108 aaKnown RBP6.35□□□□□ -1.39
CD28-201ENST00000324106 MRPL55Q7Z7F7 128 aaKnown RBP6.34□□□□□ -1.39
CD28-201ENST00000324106 MAPKAPK5-AS1Q8N8E1 139 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 LIMD2Q9BT23 127 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 TET2Q6N021 2002 aaPredicted RBP6.34□□□□□ -1.39
CD28-201ENST00000324106 USP24Q9UPU5 2620 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 COL6A3P12111 3177 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 WDFY4Q6ZS81 3184 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 LOC400499M0QZD8 3231 aa6.34□□□□□ -1.39
CD28-201ENST00000324106 SPATA3Q8NHX4 192 aa6.34□□□□□ -1.4
CD28-201ENST00000324106 SPTSSBQ8NFR3 76 aa6.33□□□□□ -1.4
CD28-201ENST00000324106 TRBV10-3A0A0K0K1G6 114 aa6.33□□□□□ -1.4
CD28-201ENST00000324106 NDUFC2O95298 119 aa6.33□□□□□ -1.4
CD28-201ENST00000324106 ASPMQ8IZT6 3477 aa6.33□□□□□ -1.4
CD28-201ENST00000324106 AMELXQ99217 191 aa6.33□□□□□ -1.4
CD28-201ENST00000324106 Q8N9L7 120 aa6.32□□□□□ -1.4
CD28-201ENST00000324106 MUC4Q99102 2169 aa6.32□□□□□ -1.4
CD28-201ENST00000324106 LINC00694P0DN24 101 aa6.32□□□□□ -1.4
CD28-201ENST00000324106 C9orf116Q5BN46 136 aaPredicted RBP6.32□□□□□ -1.4
CD28-201ENST00000324106 SBSPONQ8IVN8 264 aa6.32□□□□□ -1.4
CD28-201ENST00000324106 SCXQ7RTU7 201 aa6.31□□□□□ -1.4
CD28-201ENST00000324106 VPS13AQ96RL7 3174 aa6.31□□□□□ -1.4
CD28-201ENST00000324106 C3orf22Q8N5N4 141 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 NTM-AS1Q6ZSK4 140 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 CELA1Q9UNI1 258 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 GAS8-AS1O95177 125 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 FAM19A3Q7Z5A8 133 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 C11orf72Q8NBR9 251 aa6.3□□□□□ -1.4
CD28-201ENST00000324106 J3KT08 172 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 ESRGQ1W209 222 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 ATRQ13535 2644 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 PRR15LQ9BU68 103 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 CPAMD8Q8IZJ3 1885 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
CD28-201ENST00000324106 C16orf90A8MZG2 172 aa6.28□□□□□ -1.4
CD28-201ENST00000324106 Q6ZRU5 148 aa6.28□□□□□ -1.4
CD28-201ENST00000324106 Q9BRP9 147 aa6.28□□□□□ -1.4
CD28-201ENST00000324106 EML5Q05BV3 1969 aa6.28□□□□□ -1.4
CD28-201ENST00000324106 B5MCH6 92 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 FRYLO94915 3013 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 C20orf197Q8N268 126 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 X6R8D5 127 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 HELZ2Q9BYK8 2649 aaKnown RBP6.27□□□□□ -1.41
CD28-201ENST00000324106 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 Q6ZSN1 163 aa6.27□□□□□ -1.41
CD28-201ENST00000324106 NDUFC1O43677 76 aa6.26□□□□□ -1.41
CD28-201ENST00000324106 KIF25-AS1Q9Y6Z4 181 aa6.26□□□□□ -1.41
CD28-201ENST00000324106 Q6ZVQ6 151 aa6.26□□□□□ -1.41
CD28-201ENST00000324106 Q8N814 137 aa6.26□□□□□ -1.41
CD28-201ENST00000324106 LINC00315P59091 139 aa6.25□□□□□ -1.41
CD28-201ENST00000324106 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
CD28-201ENST00000324106 C22orf24Q9Y442 160 aa6.25□□□□□ -1.41
CD28-201ENST00000324106 FAM236DA0A1B0GTK5 79 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms