RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 IGHV4-28A0A0C4DH34 117 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 COX6A2Q02221 97 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 IMUPQ9GZP8 106 aa11.01□□□□□ -0.65
VARS2-201ENST00000321897 MPLKIPQ8TAP9 179 aa11□□□□□ -0.65
VARS2-201ENST00000321897 SETXQ7Z333 2677 aaKnown RBP11□□□□□ -0.65
VARS2-201ENST00000321897 Q8N2B8 174 aa11□□□□□ -0.65
VARS2-201ENST00000321897 CXCL5P42830 114 aa11□□□□□ -0.65
VARS2-201ENST00000321897 LINC00269Q8N2A0 174 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 SMIM11BQ8TCY0 68 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 CSDC2Q9Y534 153 aaKnown RBP10.99□□□□□ -0.65
VARS2-201ENST00000321897 CELSR1Q9NYQ6 3014 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 FAM240AA0A1B0GVK7 77 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 HRNRQ86YZ3 2850 aaPredicted RBP10.99□□□□□ -0.65
VARS2-201ENST00000321897 UNC79Q9P2D8 2635 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 LINC01546A6NGU7 62 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 ZNF561-AS1K7EIQ3 104 aa10.99□□□□□ -0.65
VARS2-201ENST00000321897 LINC00315P59091 139 aa10.98□□□□□ -0.65
VARS2-201ENST00000321897 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
VARS2-201ENST00000321897 PYGO1Q9Y3Y4 419 aa10.98□□□□□ -0.65
VARS2-201ENST00000321897 STAB1Q9NY15 2570 aa10.97□□□□□ -0.65
VARS2-201ENST00000321897 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
VARS2-201ENST00000321897 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
VARS2-201ENST00000321897 FAM236DA0A1B0GTK5 79 aa10.96□□□□□ -0.65
VARS2-201ENST00000321897 FAM236CP0DP71 79 aa10.96□□□□□ -0.65
VARS2-201ENST00000321897 KIR2DL5BQ8NHK3 375 aa10.96□□□□□ -0.66
VARS2-201ENST00000321897 A0A087WYN8 130 aa10.95□□□□□ -0.66
VARS2-201ENST00000321897 SBSPONQ8IVN8 264 aa10.95□□□□□ -0.66
VARS2-201ENST00000321897 IGKV2D-24A0A075B6R9 120 aa10.95□□□□□ -0.66
VARS2-201ENST00000321897 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
VARS2-201ENST00000321897 HILS1P60008 231 aa10.94□□□□□ -0.66
VARS2-201ENST00000321897 APOC4P55056 127 aa10.94□□□□□ -0.66
VARS2-201ENST00000321897 PRR3P79522 188 aaKnown RBP10.94□□□□□ -0.66
VARS2-201ENST00000321897 JMJD7-PLA2G4BH0Y9G9 81 aa10.94□□□□□ -0.66
VARS2-201ENST00000321897 TMEM258P61165 79 aa10.94□□□□□ -0.66
VARS2-201ENST00000321897 HIGD2BQ4VC39 106 aa10.94□□□□□ -0.66
VARS2-201ENST00000321897 LINC00846Q9NV44 126 aa10.93□□□□□ -0.66
VARS2-201ENST00000321897 COL6A5A8TX70 2615 aa10.93□□□□□ -0.66
VARS2-201ENST00000321897 TRBV10-1A0A0K0K1A3 114 aa10.93□□□□□ -0.66
VARS2-201ENST00000321897 LRRC75A-AS1Q8N1F1 130 aa10.93□□□□□ -0.66
VARS2-201ENST00000321897 XAGE1AQ9HD64 81 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 CCL18P55774 89 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 C6orf99Q4VX62 202 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
VARS2-201ENST00000321897 IGLV4-60A0A075B6I1 120 aa10.91□□□□□ -0.66
VARS2-201ENST00000321897 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
VARS2-201ENST00000321897 TIMM17BO60830 172 aa10.91□□□□□ -0.66
VARS2-201ENST00000321897 AMELXQ99217 191 aa10.9□□□□□ -0.66
VARS2-201ENST00000321897 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
VARS2-201ENST00000321897 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.66
VARS2-201ENST00000321897 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
VARS2-201ENST00000321897 LY6G6DO95868 133 aa10.89□□□□□ -0.67
VARS2-201ENST00000321897 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
VARS2-201ENST00000321897 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
VARS2-201ENST00000321897 SPAG11BQ08648 103 aa10.88□□□□□ -0.67
VARS2-201ENST00000321897 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
VARS2-201ENST00000321897 C9orf116Q5BN46 136 aaPredicted RBP10.88□□□□□ -0.67
VARS2-201ENST00000321897 C4orf26Q17RF5 130 aa10.87□□□□□ -0.67
VARS2-201ENST00000321897 OXLD1Q5BKU9 147 aa10.87□□□□□ -0.67
VARS2-201ENST00000321897 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
VARS2-201ENST00000321897 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
VARS2-201ENST00000321897 SOSTDC1Q6X4U4 206 aa10.86□□□□□ -0.67
VARS2-201ENST00000321897 CDC42SE2Q9NRR3 84 aa10.86□□□□□ -0.67
VARS2-201ENST00000321897 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
VARS2-201ENST00000321897 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
VARS2-201ENST00000321897 REG3AQ06141 175 aa10.85□□□□□ -0.67
VARS2-201ENST00000321897 ZNF575Q86XF7 245 aa10.85□□□□□ -0.67
VARS2-201ENST00000321897 CHCHD10Q8WYQ3 142 aaPredicted RBP10.85□□□□□ -0.67
VARS2-201ENST00000321897 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
VARS2-201ENST00000321897 PSCAO43653 123 aa10.83□□□□□ -0.68
VARS2-201ENST00000321897 Q6JHZ5 121 aa10.83□□□□□ -0.68
VARS2-201ENST00000321897 NREPQ16612 68 aa10.83□□□□□ -0.68
VARS2-201ENST00000321897 A8MTW9 85 aa10.83□□□□□ -0.68
VARS2-201ENST00000321897 Q6ZQY7 126 aa10.83□□□□□ -0.68
VARS2-201ENST00000321897 LRCOL1A6NCL2 159 aa10.82□□□□□ -0.68
VARS2-201ENST00000321897 PRR4Q16378 134 aa10.82□□□□□ -0.68
VARS2-201ENST00000321897 IBA57-AS1B1ANH7 110 aa10.82□□□□□ -0.68
VARS2-201ENST00000321897 F8WEM9 126 aa10.82□□□□□ -0.68
VARS2-201ENST00000321897 UBE2DNLQ8IWF7 75 aa10.82□□□□□ -0.68
VARS2-201ENST00000321897 RETNQ9HD89 108 aa10.81□□□□□ -0.68
VARS2-201ENST00000321897 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
VARS2-201ENST00000321897 TRBV6-4A0A1B0GX49 114 aa10.8□□□□□ -0.68
VARS2-201ENST00000321897 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
VARS2-201ENST00000321897 NKAPP1Q8N9T2 125 aa10.8□□□□□ -0.68
VARS2-201ENST00000321897 RPL28P46779 137 aaKnown RBP10.8□□□□□ -0.68
VARS2-201ENST00000321897 LITAFQ99732 161 aa10.8□□□□□ -0.68
VARS2-201ENST00000321897 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
VARS2-201ENST00000321897 NDUFC2O95298 119 aa10.79□□□□□ -0.68
VARS2-201ENST00000321897 NSD1Q96L73 2696 aaPredicted RBP10.79□□□□□ -0.68
VARS2-201ENST00000321897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
VARS2-201ENST00000321897 C3orf84H3BNL1 204 aa10.77□□□□□ -0.68
VARS2-201ENST00000321897 Q8N3U1 123 aa10.77□□□□□ -0.68
VARS2-201ENST00000321897 IGLV1-51P01701 117 aa10.77□□□□□ -0.69
VARS2-201ENST00000321897 RMI2Q96E14 147 aa10.77□□□□□ -0.69
VARS2-201ENST00000321897 DIRC1Q969H9 104 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms