RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
SMCHD1-201ENST00000320876 CRIP2P52943 208 aaPredicted RBP12.25□□□□□ -0.45
SMCHD1-201ENST00000320876 hDV103S1A0JD37 113 aa12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 NANOS2P60321 138 aaKnown RBP12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 PRORYQ9H606 182 aa12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 A0A1W2PNU3 283 aaPredicted RBP12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 HCG22E2RYF7 251 aa12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 PCSK5Q92824 1860 aa12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 CRYGAP11844 174 aa12.24□□□□□ -0.45
SMCHD1-201ENST00000320876 Q8N6K4 173 aa12.23□□□□□ -0.45
SMCHD1-201ENST00000320876 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
SMCHD1-201ENST00000320876 F8WDY8 70 aa12.22□□□□□ -0.45
SMCHD1-201ENST00000320876 Q6ZSV7 163 aa12.22□□□□□ -0.45
SMCHD1-201ENST00000320876 SHISA2Q6UWI4 295 aa12.21□□□□□ -0.45
SMCHD1-201ENST00000320876 LINC00310P59036 64 aa12.21□□□□□ -0.45
SMCHD1-201ENST00000320876 IGLV1-40P01703 118 aa12.21□□□□□ -0.45
SMCHD1-201ENST00000320876 ZNF702PQ9H963 129 aa12.21□□□□□ -0.45
SMCHD1-201ENST00000320876 BEAN1Q3B7T3 259 aa12.21□□□□□ -0.46
SMCHD1-201ENST00000320876 COX6A2Q02221 97 aa12.2□□□□□ -0.46
SMCHD1-201ENST00000320876 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
SMCHD1-201ENST00000320876 USP9XQ93008 2570 aaPredicted RBP12.2□□□□□ -0.46
SMCHD1-201ENST00000320876 JMJD1CQ15652 2540 aa12.2□□□□□ -0.46
SMCHD1-201ENST00000320876 X6R8D5 127 aa12.2□□□□□ -0.46
SMCHD1-201ENST00000320876 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 SERTAD4-AS1Q5TG53 156 aa12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 CHCHD7Q9BUK0 85 aa12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 UNQ6190/PRO20217Q6UXQ8 127 aa12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 ANKRD11Q6UB99 2663 aaPredicted RBP12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 IGLV2-18A0A075B6J9 118 aa12.19□□□□□ -0.46
SMCHD1-201ENST00000320876 C11orf71Q6IPW1 123 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 C10orf99Q6UWK7 81 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 TSPEAR-AS2P59090 65 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 AMELXQ99217 191 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 Q9BRP9 147 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 PIEZO1Q92508 2521 aa12.18□□□□□ -0.46
SMCHD1-201ENST00000320876 PRR3P79522 188 aaKnown RBP12.16□□□□□ -0.46
SMCHD1-201ENST00000320876 PCOTHQ58A44 107 aa12.16□□□□□ -0.46
SMCHD1-201ENST00000320876 NCOR2Q9Y618 2525 aa12.15□□□□□ -0.46
SMCHD1-201ENST00000320876 VPREB1P12018 145 aa12.15□□□□□ -0.46
SMCHD1-201ENST00000320876 PRM2P04554 102 aa12.14□□□□□ -0.47
SMCHD1-201ENST00000320876 INAFM1C9JVW0 142 aa12.14□□□□□ -0.47
SMCHD1-201ENST00000320876 M0R2N4 97 aa12.13□□□□□ -0.47
SMCHD1-201ENST00000320876 URB1-AS1Q96HZ7 61 aa12.13□□□□□ -0.47
SMCHD1-201ENST00000320876 WISP2O76076 250 aa12.12□□□□□ -0.47
SMCHD1-201ENST00000320876 SBSPONQ8IVN8 264 aa12.12□□□□□ -0.47
SMCHD1-201ENST00000320876 C19orf84I3L1E1 186 aa12.11□□□□□ -0.47
SMCHD1-201ENST00000320876 SPINK1P00995 79 aa12.11□□□□□ -0.47
SMCHD1-201ENST00000320876 SPAG11AQ6PDA7 123 aa12.11□□□□□ -0.47
SMCHD1-201ENST00000320876 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
SMCHD1-201ENST00000320876 LINC00846Q9NV44 126 aa12.1□□□□□ -0.47
SMCHD1-201ENST00000320876 C1orf64Q8NEQ6 169 aa12.1□□□□□ -0.47
SMCHD1-201ENST00000320876 C18orf65Q6ZTR6 163 aa12.1□□□□□ -0.47
SMCHD1-201ENST00000320876 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
SMCHD1-201ENST00000320876 NUPR2A6NF83 97 aa12.09□□□□□ -0.47
SMCHD1-201ENST00000320876 LINC01561Q8N1V8 128 aa12.09□□□□□ -0.47
SMCHD1-201ENST00000320876 COX8CQ7Z4L0 72 aa12.09□□□□□ -0.47
SMCHD1-201ENST00000320876 A0A087WSZ3 146 aa12.08□□□□□ -0.48
SMCHD1-201ENST00000320876 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
SMCHD1-201ENST00000320876 RETNLBQ9BQ08 111 aa12.08□□□□□ -0.48
SMCHD1-201ENST00000320876 TP53AIP1Q9HCN2 124 aa12.08□□□□□ -0.48
SMCHD1-201ENST00000320876 RPS28P62857 69 aaKnown RBP12.07□□□□□ -0.48
SMCHD1-201ENST00000320876 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
SMCHD1-201ENST00000320876 C2orf48Q96LS8 159 aa12.07□□□□□ -0.48
SMCHD1-201ENST00000320876 A0A1B0GU69 56 aa12.06□□□□□ -0.48
SMCHD1-201ENST00000320876 LY6G6CO95867 125 aa12.05□□□□□ -0.48
SMCHD1-201ENST00000320876 IGLV4-60A0A075B6I1 120 aa12.04□□□□□ -0.48
SMCHD1-201ENST00000320876 C7orf65Q6ZTY9 151 aa12.04□□□□□ -0.48
SMCHD1-201ENST00000320876 IGLV5-52A0A0A0MRZ9 124 aa12.04□□□□□ -0.48
SMCHD1-201ENST00000320876 DEFB116Q30KQ4 102 aa12.02□□□□□ -0.48
SMCHD1-201ENST00000320876 ACYP2P14621 99 aa12.02□□□□□ -0.49
SMCHD1-201ENST00000320876 FHL2Q14192 279 aa12.02□□□□□ -0.49
SMCHD1-201ENST00000320876 LINC00337Q8N6G1 96 aa12.02□□□□□ -0.49
SMCHD1-201ENST00000320876 USP9YO00507 2555 aaPredicted RBP12.02□□□□□ -0.49
SMCHD1-201ENST00000320876 LINC01546A6NGU7 62 aa12.01□□□□□ -0.49
SMCHD1-201ENST00000320876 SPTBN4Q9H254 2564 aa12.01□□□□□ -0.49
SMCHD1-201ENST00000320876 Q6ZTC4 211 aa12.01□□□□□ -0.49
SMCHD1-201ENST00000320876 LINC01556Q5JQF7 62 aa12.01□□□□□ -0.49
SMCHD1-201ENST00000320876 LY6G6DO95868 133 aa12□□□□□ -0.49
SMCHD1-201ENST00000320876 ZNF580Q9UK33 172 aa12□□□□□ -0.49
SMCHD1-201ENST00000320876 A0A096LNJ9 63 aa12□□□□□ -0.49
SMCHD1-201ENST00000320876 BCE1O60756 84 aa12□□□□□ -0.49
SMCHD1-201ENST00000320876 SMIM29Q86T20 159 aa11.99□□□□□ -0.49
SMCHD1-201ENST00000320876 A0A1B0GW54 56 aa11.99□□□□□ -0.49
SMCHD1-201ENST00000320876 A8MTW9 85 aa11.98□□□□□ -0.49
SMCHD1-201ENST00000320876 ODF3L2Q3SX64 289 aa11.98□□□□□ -0.49
SMCHD1-201ENST00000320876 C4orf26Q17RF5 130 aa11.98□□□□□ -0.49
SMCHD1-201ENST00000320876 C8orf87E5RJ46 101 aa11.97□□□□□ -0.49
SMCHD1-201ENST00000320876 Q8N2B8 174 aa11.97□□□□□ -0.49
SMCHD1-201ENST00000320876 PRLHP81277 87 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 IGKV2D-30A0A075B6S6 120 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 IGKV2-30P06310 120 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 Q9UF83 564 aa11.95□□□□□ -0.5
SMCHD1-201ENST00000320876 PRRC2CQ9Y520 2896 aaKnown RBP11.94□□□□□ -0.5
SMCHD1-201ENST00000320876 BRI3O95415 125 aa11.94□□□□□ -0.5
SMCHD1-201ENST00000320876 MTORP42345 2549 aa11.94□□□□□ -0.5
SMCHD1-201ENST00000320876 H3BPC8 53 aa11.91□□□□□ -0.5
SMCHD1-201ENST00000320876 EDN2P20800 178 aa11.91□□□□□ -0.5
SMCHD1-201ENST00000320876 SPATA3Q8NHX4 192 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms