RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 LEPROTO15243 131 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 LY6G6CO95867 125 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00242Q5T6M2 205 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00269Q8N2A0 174 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 KLK12Q9UKR0 248 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 TMEM223A0PJW6 202 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 EPM2AB3EWF7 344 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 E9PLD3 99 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 RPL39P62891 51 aaKnown RBP2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 HIST1H2BLQ99880 126 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 LOC107984156A0A0G2JMH3 177 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 LRCOL1A6NCL2 159 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 HSBP1L1C9JCN9 74 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 PSCAO43653 123 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 PRSS1P07477 247 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 ARL17AQ8IVW1 177 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 UBE2WQ96B02 151 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
SCAMP1-201ENST00000320280 GAGE12HA6NDE8 117 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 NDUFA1O15239 70 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3-33P01772 117 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 SMIM6P0DI80 62 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3-30-3P0DP02 117 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 ZNF22P17026 224 aaPredicted RBP2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 MALP21145 153 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 JOSD1Q15040 202 aaPredicted RBP2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 Q8N814 137 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 Q9UF83 564 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 A0A087WTM6 91 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
SCAMP1-201ENST00000320280 IGLV5-37A0A075B6J1 123 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 IGKV2D-24A0A075B6R9 120 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 LOC107984640A0A0U1RRK4 108 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 SMIM1B2RUZ4 78 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 C3orf79P0CE67 100 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 CIRBPQ14011 172 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 COX7B2Q8TF08 81 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 NOTCH1P46531 2555 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 IFITM1P13164 125 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 TAL2Q16559 108 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 C15orf56Q8N910 161 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 TP73-AS1Q9UF72 201 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 STARD9Q9P2P6 4700 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 A0A1B0GVY2 172 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 LINC00469Q8N7U9 141 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 C9orf163Q8N9P6 203 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 SPANXB1Q9NS25 103 aaPredicted RBP2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 HIGD1BQ9P298 99 aa2.16□□□□□ -2.06
SCAMP1-201ENST00000320280 USP17L23D6RBM5 183 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 RTL8CO15255 209 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 SPAG11BQ08648 103 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 KIAA0087Q14695 138 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 ORAOV1Q8WV07 137 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 CARD19Q96LW7 228 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 KRTAP1-5Q9BYS1 174 aa2.15□□□□□ -2.06
SCAMP1-201ENST00000320280 NDUFC2O95298 119 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 SYCNQ0VAF6 134 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 SPANXDQ9BXN6 97 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 SPANXCQ9NY87 97 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 TENM3Q9P273 2699 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 COL7A1Q02388 2944 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 TRAV13-1A0A0B4J241 112 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 A0A0J9YXV3 536 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 NUPR1O60356 82 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 FABP4P15090 132 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 LGALS3P17931 250 aaKnown RBP2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 FAM19A2Q8N3H0 131 aa2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 ZNF625Q96I27 306 aaPredicted RBP2.15□□□□□ -2.07
SCAMP1-201ENST00000320280 TRBV10-2A0A0K0K1G8 114 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 C16orf90A8MZG2 172 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 TMEM238C9JI98 176 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 CKS1BP61024 79 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 S100A12P80511 92 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 Q6ZSA8 131 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 CDKN2A-AS1Q9UH64 79 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 NDUFC2-KCTD14E9PQ53 114 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 J3QQQ9 107 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 CDK2AP2O75956 126 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 XCL1P47992 114 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 KRTDAPP60985 99 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 TMEM170BQ5T4T1 132 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 DYNC1H1Q14204 4646 aaKnown RBP2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 DNAH10Q8IVF4 4471 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 C6orf226Q5I0X4 101 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 LINC00526Q96FQ7 95 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 CAMK2N2Q96S95 79 aa2.14□□□□□ -2.07
SCAMP1-201ENST00000320280 IGKV2D-26A0A0A0MRZ7 120 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 COX8AP10176 69 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 CTAG1AP78358 180 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 RPL24P83731 157 aaKnown RBP2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 COX6A2Q02221 97 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 ZC2HC1BQ5TFG8 222 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 VAMP8Q9BV40 100 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 IGLV5-52A0A0A0MRZ9 124 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 hDV102S1A0JD36 115 aa2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 LBHQ53QV2 105 aaPredicted RBP2.13□□□□□ -2.07
SCAMP1-201ENST00000320280 Q9HAA7 133 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms