RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
PTPRA-202ENST00000318266 TRGV2A0A075B6R0 118 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 STHQ8IWL8 128 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 FAM19A1Q7Z5A9 133 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 A0A1W2PRX2 142 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 HRCT1Q6UXD1 115 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 ZNF702PQ9H963 129 aa6.8□□□□□ -1.32
PTPRA-202ENST00000318266 NBEAL2Q6ZNJ1 2754 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 H0YGX0 51 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 OVOL2Q9BRP0 275 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 UPK3BQ9BT76 320 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 TMEM258P61165 79 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 FHL2Q14192 279 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 ENHOQ6UWT2 76 aa6.79□□□□□ -1.32
PTPRA-202ENST00000318266 GHRHP01286 108 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 ORMDL1Q9P0S3 153 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 A8MTW9 85 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 DEFB114Q30KQ6 69 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 C6orf226Q5I0X4 101 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 FAM19A3Q7Z5A8 133 aa6.78□□□□□ -1.32
PTPRA-202ENST00000318266 SS18Q15532 418 aa6.77□□□□□ -1.33
PTPRA-202ENST00000318266 C20orf197Q8N268 126 aa6.77□□□□□ -1.33
PTPRA-202ENST00000318266 TRBV10-1A0A0K0K1A3 114 aa6.77□□□□□ -1.33
PTPRA-202ENST00000318266 XCL1P47992 114 aa6.77□□□□□ -1.33
PTPRA-202ENST00000318266 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
PTPRA-202ENST00000318266 WFDC10AQ9H1F0 79 aa6.76□□□□□ -1.33
PTPRA-202ENST00000318266 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
PTPRA-202ENST00000318266 OBSCN-AS1Q96MR7 158 aa6.76□□□□□ -1.33
PTPRA-202ENST00000318266 TEP1Q99973 2627 aaKnown RBP6.76□□□□□ -1.33
PTPRA-202ENST00000318266 NBPF19A0A087WUL8 3843 aa6.76□□□□□ -1.33
PTPRA-202ENST00000318266 F8P00451 2351 aa6.75□□□□□ -1.33
PTPRA-202ENST00000318266 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
PTPRA-202ENST00000318266 RPL35AP18077 110 aaKnown RBP6.75□□□□□ -1.33
PTPRA-202ENST00000318266 ACANP16112 2415 aa6.75□□□□□ -1.33
PTPRA-202ENST00000318266 CCKP06307 115 aa6.75□□□□□ -1.33
PTPRA-202ENST00000318266 TRBV6-4A0A1B0GX49 114 aa6.74□□□□□ -1.33
PTPRA-202ENST00000318266 IBA57-AS1B1ANH7 110 aa6.74□□□□□ -1.33
PTPRA-202ENST00000318266 DEFB113Q30KQ7 82 aa6.74□□□□□ -1.33
PTPRA-202ENST00000318266 A0A096LPF7 62 aa6.74□□□□□ -1.33
PTPRA-202ENST00000318266 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
PTPRA-202ENST00000318266 PDZD2O15018 2839 aa6.73□□□□□ -1.33
PTPRA-202ENST00000318266 A0A087WZ39 114 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 Q5XG85 94 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 TMEM86BQ8N661 226 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 IL17DQ8TAD2 202 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 MTORP42345 2549 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 TRBV6-8A0A0A6YYG3 113 aa6.72□□□□□ -1.33
PTPRA-202ENST00000318266 C9orf116Q5BN46 136 aaPredicted RBP6.72□□□□□ -1.33
PTPRA-202ENST00000318266 A0A096LNT2 108 aa6.71□□□□□ -1.33
PTPRA-202ENST00000318266 DEFB130BP0DP73 79 aa6.71□□□□□ -1.33
PTPRA-202ENST00000318266 DEFB130AP0DP74 79 aa6.71□□□□□ -1.33
PTPRA-202ENST00000318266 Q6YL49 198 aa6.71□□□□□ -1.33
PTPRA-202ENST00000318266 Q8N814 137 aa6.71□□□□□ -1.33
PTPRA-202ENST00000318266 ITPR2Q14571 2701 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 KRTAP10-9P60411 292 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 UBL5Q9BZL1 73 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 APCP25054 2843 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 LINC00959A0A1B0GUT2 108 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 HAMPP81172 84 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 C4orf3Q8WVX3 66 aa6.71□□□□□ -1.34
PTPRA-202ENST00000318266 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
PTPRA-202ENST00000318266 C6orf99Q4VX62 202 aa6.7□□□□□ -1.34
PTPRA-202ENST00000318266 M0R2N4 97 aa6.7□□□□□ -1.34
PTPRA-202ENST00000318266 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
PTPRA-202ENST00000318266 SNURFQ9Y675 71 aa6.7□□□□□ -1.34
PTPRA-202ENST00000318266 JMJD7-PLA2G4BH0Y9G9 81 aa6.69□□□□□ -1.34
PTPRA-202ENST00000318266 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
PTPRA-202ENST00000318266 LAMTOR3Q9UHA4 124 aa6.69□□□□□ -1.34
PTPRA-202ENST00000318266 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
PTPRA-202ENST00000318266 TMEM256-PLSCR3K7ERE1 68 aa6.69□□□□□ -1.34
PTPRA-202ENST00000318266 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 TRAV25A0A0B4J276 109 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 LY6G6DO95868 133 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 OTOGQ6ZRI0 2925 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 FAM236DA0A1B0GTK5 79 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
PTPRA-202ENST00000318266 FAM236CP0DP71 79 aa6.68□□□□□ -1.34
PTPRA-202ENST00000318266 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
PTPRA-202ENST00000318266 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
PTPRA-202ENST00000318266 LINC00269Q8N2A0 174 aa6.67□□□□□ -1.34
PTPRA-202ENST00000318266 Q8N3U1 123 aa6.67□□□□□ -1.34
PTPRA-202ENST00000318266 Q8NDZ9 215 aa6.67□□□□□ -1.34
PTPRA-202ENST00000318266 NDUFC2O95298 119 aa6.66□□□□□ -1.34
PTPRA-202ENST00000318266 C16orf74Q96GX8 76 aa6.66□□□□□ -1.34
PTPRA-202ENST00000318266 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
PTPRA-202ENST00000318266 TRAV10A0A0B4J240 114 aa6.66□□□□□ -1.34
PTPRA-202ENST00000318266 GYPEP15421 78 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 CR1P17927 2039 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 ATP5EP2Q5VTU8 51 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 RMI2Q96E14 147 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 CCL24O00175 119 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 RBM3P98179 157 aaKnown RBP6.65□□□□□ -1.34
PTPRA-202ENST00000318266 ESM1Q9NQ30 184 aa6.65□□□□□ -1.34
PTPRA-202ENST00000318266 H7BZZ5 65 aa6.64□□□□□ -1.35
PTPRA-202ENST00000318266 J3QLI3 93 aa6.64□□□□□ -1.35
PTPRA-202ENST00000318266 KRTAP1-3Q8IUG1 177 aa6.64□□□□□ -1.35
PTPRA-202ENST00000318266 ZNF469Q96JG9 3925 aaPredicted RBP6.63□□□□□ -1.35
PTPRA-202ENST00000318266 IGHV4-31P0DP07 118 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms