RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
CDHR3-201ENST00000317716 NOTCH1P46531 2555 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 MXRA5Q9NR99 2828 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 K7EQD1 137 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 PF4P02776 101 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 DCANP1Q8TF63 244 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 H0YGX0 51 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 SERP2Q8N6R1 65 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 C9orf85Q96MD7 179 aa5.47□□□□□ -1.53
CDHR3-201ENST00000317716 LINC01546A6NGU7 62 aa5.46□□□□□ -1.53
CDHR3-201ENST00000317716 CYSRT1A8MQ03 144 aa5.46□□□□□ -1.53
CDHR3-201ENST00000317716 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.53
CDHR3-201ENST00000317716 FAM19A1Q7Z5A9 133 aa5.46□□□□□ -1.53
CDHR3-201ENST00000317716 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
CDHR3-201ENST00000317716 LINC00846Q9NV44 126 aa5.46□□□□□ -1.54
CDHR3-201ENST00000317716 SBSPONQ8IVN8 264 aa5.46□□□□□ -1.54
CDHR3-201ENST00000317716 FAM236DA0A1B0GTK5 79 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 FAM236CP0DP71 79 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 FAM240AA0A1B0GVK7 77 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 LY6G6DO95868 133 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 DSCR9P59020 149 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 SMCR5Q8TEV8 140 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 WFDC10AQ9H1F0 79 aa5.45□□□□□ -1.54
CDHR3-201ENST00000317716 NSD1Q96L73 2696 aaPredicted RBP5.45□□□□□ -1.54
CDHR3-201ENST00000317716 K7EMT4 169 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 GYPEP15421 78 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 ZNF575Q86XF7 245 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 A6NDX4 124 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 CCL18P55774 89 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 AMELXQ99217 191 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 PYGO1Q9Y3Y4 419 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 LRCOL1A6NCL2 159 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 H3BUA1 57 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 CHCHD7Q9BUK0 85 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 MAP6D1Q9H9H5 199 aa5.44□□□□□ -1.54
CDHR3-201ENST00000317716 A8MTW9 85 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 IGHV4-31P0DP07 118 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 C6orf99Q4VX62 202 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 PRR4Q16378 134 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 LRRC75A-AS1Q8N1F1 130 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 LINC00337Q8N6G1 96 aa5.43□□□□□ -1.54
CDHR3-201ENST00000317716 PDZD2O15018 2839 aa5.42□□□□□ -1.54
CDHR3-201ENST00000317716 TRBV7-7A0A0K0K1E9 115 aa5.42□□□□□ -1.54
CDHR3-201ENST00000317716 TMEM258P61165 79 aa5.42□□□□□ -1.54
CDHR3-201ENST00000317716 XAGE1AQ9HD64 81 aa5.42□□□□□ -1.54
CDHR3-201ENST00000317716 C9orf116Q5BN46 136 aaPredicted RBP5.42□□□□□ -1.54
CDHR3-201ENST00000317716 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.41□□□□□ -1.54
CDHR3-201ENST00000317716 JMJD7-PLA2G4BH0Y9G9 81 aa5.4□□□□□ -1.54
CDHR3-201ENST00000317716 NBEAL2Q6ZNJ1 2754 aa5.4□□□□□ -1.55
CDHR3-201ENST00000317716 F8WEM9 126 aa5.4□□□□□ -1.55
CDHR3-201ENST00000317716 TIMM17BO60830 172 aa5.4□□□□□ -1.55
CDHR3-201ENST00000317716 LITAFQ99732 161 aa5.4□□□□□ -1.55
CDHR3-201ENST00000317716 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 TMEM256-PLSCR3K7ERE1 68 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 Q6ZQY7 126 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 CCL24O00175 119 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 RMI2Q96E14 147 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 CDC42SE2Q9NRR3 84 aa5.39□□□□□ -1.55
CDHR3-201ENST00000317716 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
CDHR3-201ENST00000317716 BRI3O95415 125 aa5.38□□□□□ -1.55
CDHR3-201ENST00000317716 C3orf84H3BNL1 204 aa5.38□□□□□ -1.55
CDHR3-201ENST00000317716 Q6JHZ5 121 aa5.38□□□□□ -1.55
CDHR3-201ENST00000317716 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
CDHR3-201ENST00000317716 KLK12Q9UKR0 248 aa5.37□□□□□ -1.55
CDHR3-201ENST00000317716 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
CDHR3-201ENST00000317716 NREPQ16612 68 aa5.37□□□□□ -1.55
CDHR3-201ENST00000317716 HIGD2BQ4VC39 106 aa5.37□□□□□ -1.55
CDHR3-201ENST00000317716 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
CDHR3-201ENST00000317716 TRBV10-1A0A0K0K1A3 114 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 RPL28P46779 137 aaKnown RBP5.36□□□□□ -1.55
CDHR3-201ENST00000317716 Q8N9L7 120 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 CELA1Q9UNI1 258 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 CR1P17927 2039 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 IBA57-AS1B1ANH7 110 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 DEFB114Q30KQ6 69 aa5.36□□□□□ -1.55
CDHR3-201ENST00000317716 TMEM89A2RUT3 159 aa5.35□□□□□ -1.55
CDHR3-201ENST00000317716 NANOS2P60321 138 aaKnown RBP5.35□□□□□ -1.55
CDHR3-201ENST00000317716 TRBV6-8A0A0A6YYG3 113 aa5.35□□□□□ -1.55
CDHR3-201ENST00000317716 NDUFC2O95298 119 aa5.35□□□□□ -1.55
CDHR3-201ENST00000317716 FAM19A4Q96LR4 140 aa5.35□□□□□ -1.55
CDHR3-201ENST00000317716 DNAJC9-AS1A6NH13 148 aa5.34□□□□□ -1.55
CDHR3-201ENST00000317716 CCKP06307 115 aa5.34□□□□□ -1.55
CDHR3-201ENST00000317716 DEFB135Q30KP9 77 aa5.34□□□□□ -1.55
CDHR3-201ENST00000317716 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.55
CDHR3-201ENST00000317716 CRYGAP11844 174 aa5.34□□□□□ -1.55
CDHR3-201ENST00000317716 NTM-AS1Q6ZSK4 140 aa5.34□□□□□ -1.55
CDHR3-201ENST00000317716 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
CDHR3-201ENST00000317716 J3QLI3 93 aa5.34□□□□□ -1.56
CDHR3-201ENST00000317716 FHL2Q14192 279 aa5.34□□□□□ -1.56
CDHR3-201ENST00000317716 FAM222AQ5U5X8 452 aa5.34□□□□□ -1.56
CDHR3-201ENST00000317716 LINC00959A0A1B0GUT2 108 aa5.33□□□□□ -1.56
CDHR3-201ENST00000317716 C16orf74Q96GX8 76 aa5.33□□□□□ -1.56
CDHR3-201ENST00000317716 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms