RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CASC2Q6XLA1 102 aa6.32□□□□□ -1.4
CTC1-201ENST00000315684 RTL8CO15255 209 aa6.32□□□□□ -1.4
CTC1-201ENST00000315684 SMR3BP02814 79 aaPredicted RBP6.32□□□□□ -1.4
CTC1-201ENST00000315684 WDFY4Q6ZS81 3184 aa6.32□□□□□ -1.4
CTC1-201ENST00000315684 FAM236DA0A1B0GTK5 79 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 FAM236CP0DP71 79 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 F8W1H4 67 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 POLR2KP53803 58 aaKnown RBP6.31□□□□□ -1.4
CTC1-201ENST00000315684 WFDC9Q8NEX5 89 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 NBDYA0A0U1RRE5 68 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 DLEU1O43261 78 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 Q6ZQY7 126 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 KRTAP1-3Q8IUG1 177 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 X6R8D5 127 aa6.31□□□□□ -1.4
CTC1-201ENST00000315684 ZNF580Q9UK33 172 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 LINC00588Q9Y4M8 146 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 LINC00242Q5T6M2 205 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 BPY2O14599 106 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 CCKP06307 115 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 PTH2Q96A98 100 aa6.3□□□□□ -1.4
CTC1-201ENST00000315684 VCANP13611 3396 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 Q6Q795 121 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 Q8IZM0 81 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 PYGO1Q9Y3Y4 419 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 DNAH14Q0VDD8 3507 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 SS18L2Q9UHA2 77 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 CFAP54Q96N23 3096 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 K7EP13 123 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 MRPL55Q7Z7F7 128 aaKnown RBP6.29□□□□□ -1.4
CTC1-201ENST00000315684 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 ZNF73O43830 326 aaPredicted RBP6.29□□□□□ -1.4
CTC1-201ENST00000315684 MP68P56378 58 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 LINC00337Q8N6G1 96 aa6.29□□□□□ -1.4
CTC1-201ENST00000315684 SMIM11BQ8TCY0 68 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 A8MTW9 85 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 MRPS36P82909 103 aaKnown RBP6.28□□□□□ -1.4
CTC1-201ENST00000315684 WFDC13Q8IUB5 93 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 TEX49A0A1B0GTD5 131 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 DHRS4-AS1Q9P1J3 65 aa6.28□□□□□ -1.4
CTC1-201ENST00000315684 HELZ2Q9BYK8 2649 aaKnown RBP6.27□□□□□ -1.41
CTC1-201ENST00000315684 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 Q8NAQ8 132 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 MGAQ8IWI9 3026 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 C2orf48Q96LS8 159 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 EGFEM1PQ0D2K5 195 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 ACYP1P07311 99 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 A0A096LNT2 108 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 TCL1BO95988 128 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 WFDC2Q14508 124 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
CTC1-201ENST00000315684 C11orf72Q8NBR9 251 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 H3BQ85 93 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 PHF5AQ7RTV0 110 aaKnown RBP6.26□□□□□ -1.41
CTC1-201ENST00000315684 Q9UF83 564 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 SPACA4Q8TDM5 124 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 CFAP46Q8IYW2 2715 aa6.26□□□□□ -1.41
CTC1-201ENST00000315684 NDUFC2-KCTD14E9PQ53 114 aa6.25□□□□□ -1.41
CTC1-201ENST00000315684 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
CTC1-201ENST00000315684 USP24Q9UPU5 2620 aa6.25□□□□□ -1.41
CTC1-201ENST00000315684 COX17Q14061 63 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 C22orf24Q9Y442 160 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 TRIAP1O43715 76 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 KRTAP1-1Q07627 177 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 Q9BRP9 147 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 TRIOO75962 3097 aa6.24□□□□□ -1.41
CTC1-201ENST00000315684 IGHV6-1A0A0B4J1U7 121 aa6.23□□□□□ -1.41
CTC1-201ENST00000315684 FAM19A3Q7Z5A8 133 aa6.23□□□□□ -1.41
CTC1-201ENST00000315684 IGIPA6NJ69 53 aa6.23□□□□□ -1.41
CTC1-201ENST00000315684 EYSQ5T1H1 3165 aa6.22□□□□□ -1.41
CTC1-201ENST00000315684 TMEM258P61165 79 aa6.22□□□□□ -1.41
CTC1-201ENST00000315684 HIGD1BQ9P298 99 aa6.22□□□□□ -1.41
CTC1-201ENST00000315684 PRR4Q16378 134 aa6.22□□□□□ -1.41
CTC1-201ENST00000315684 MGAM2Q2M2H8 2515 aa6.21□□□□□ -1.41
CTC1-201ENST00000315684 RPL37AP61513 92 aaKnown RBP6.21□□□□□ -1.41
CTC1-201ENST00000315684 SEC61GP60059 68 aa6.21□□□□□ -1.42
CTC1-201ENST00000315684 NTM-AS1Q6ZSK4 140 aa6.21□□□□□ -1.42
CTC1-201ENST00000315684 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.42
CTC1-201ENST00000315684 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
CTC1-201ENST00000315684 A0A1B0GUV1 79 aa6.2□□□□□ -1.42
CTC1-201ENST00000315684 ENHOQ6UWT2 76 aa6.2□□□□□ -1.42
CTC1-201ENST00000315684 ITPR3Q14573 2671 aa6.19□□□□□ -1.42
CTC1-201ENST00000315684 MOBPQ13875 183 aa6.19□□□□□ -1.42
CTC1-201ENST00000315684 COA6Q5JTJ3 125 aaKnown RBP6.19□□□□□ -1.42
CTC1-201ENST00000315684 SMCR5Q8TEV8 140 aa6.19□□□□□ -1.42
CTC1-201ENST00000315684 LST1O00453 97 aa6.19□□□□□ -1.42
CTC1-201ENST00000315684 NDUFV3P56181 108 aaKnown RBP6.18□□□□□ -1.42
CTC1-201ENST00000315684 VPS13AQ96RL7 3174 aa6.18□□□□□ -1.42
CTC1-201ENST00000315684 TSPEAR-AS2P59090 65 aa6.18□□□□□ -1.42
CTC1-201ENST00000315684 TRANK1O15050 2925 aa6.18□□□□□ -1.42
CTC1-201ENST00000315684 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
CTC1-201ENST00000315684 CNFNQ9BYD5 112 aa6.18□□□□□ -1.42
CTC1-201ENST00000315684 SPTBN5Q9NRC6 3674 aaKnown RBP6.18□□□□□ -1.42
CTC1-201ENST00000315684 FAM236AA0A1B0GUQ0 79 aa6.17□□□□□ -1.42
CTC1-201ENST00000315684 FAM236BA0A1B0GV22 79 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms