RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 BEAN1Q3B7T3 259 aa9.48□□□□□ -0.89
SNED1-201ENST00000310397 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
SNED1-201ENST00000310397 PRYO14603 147 aa9.47□□□□□ -0.89
SNED1-201ENST00000310397 A0A096LNI7 61 aa9.47□□□□□ -0.89
SNED1-201ENST00000310397 Q8N9L7 120 aa9.47□□□□□ -0.89
SNED1-201ENST00000310397 EGFEM1PQ0D2K5 195 aa9.47□□□□□ -0.89
SNED1-201ENST00000310397 Q8N3U1 123 aa9.47□□□□□ -0.89
SNED1-201ENST00000310397 A0A1B0GUV1 79 aa9.46□□□□□ -0.89
SNED1-201ENST00000310397 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.89
SNED1-201ENST00000310397 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.89
SNED1-201ENST00000310397 LOC107984640A0A0U1RRK4 108 aa9.46□□□□□ -0.89
SNED1-201ENST00000310397 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.9
SNED1-201ENST00000310397 FAM30AQ9NZY2 134 aa9.46□□□□□ -0.9
SNED1-201ENST00000310397 WFDC13Q8IUB5 93 aa9.46□□□□□ -0.9
SNED1-201ENST00000310397 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.9
SNED1-201ENST00000310397 LINC01006Q8NI28 216 aa9.46□□□□□ -0.9
SNED1-201ENST00000310397 PRO3102Q9H379 93 aa9.45□□□□□ -0.9
SNED1-201ENST00000310397 TRAV10A0A0B4J240 114 aa9.45□□□□□ -0.9
SNED1-201ENST00000310397 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
SNED1-201ENST00000310397 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
SNED1-201ENST00000310397 A0A087WVE0 104 aa9.44□□□□□ -0.9
SNED1-201ENST00000310397 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
SNED1-201ENST00000310397 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
SNED1-201ENST00000310397 CXCL6P80162 114 aa9.43□□□□□ -0.9
SNED1-201ENST00000310397 POLQO75417 2590 aa9.43□□□□□ -0.9
SNED1-201ENST00000310397 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.42□□□□□ -0.9
SNED1-201ENST00000310397 F8WDY8 70 aa9.42□□□□□ -0.9
SNED1-201ENST00000310397 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
SNED1-201ENST00000310397 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
SNED1-201ENST00000310397 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
SNED1-201ENST00000310397 LINC00846Q9NV44 126 aa9.41□□□□□ -0.9
SNED1-201ENST00000310397 KIF25-AS1Q9Y6Z4 181 aa9.41□□□□□ -0.9
SNED1-201ENST00000310397 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
SNED1-201ENST00000310397 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
SNED1-201ENST00000310397 C10orf25Q5T742 122 aa9.41□□□□□ -0.9
SNED1-201ENST00000310397 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
SNED1-201ENST00000310397 PRR4Q16378 134 aa9.4□□□□□ -0.9
SNED1-201ENST00000310397 PMAIP1Q13794 54 aa9.4□□□□□ -0.9
SNED1-201ENST00000310397 ZNF843Q8N446 348 aa9.4□□□□□ -0.9
SNED1-201ENST00000310397 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.91
SNED1-201ENST00000310397 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.91
SNED1-201ENST00000310397 PRO0461Q9UI25 63 aa9.4□□□□□ -0.91
SNED1-201ENST00000310397 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
SNED1-201ENST00000310397 EDN2P20800 178 aa9.39□□□□□ -0.91
SNED1-201ENST00000310397 FHL2Q14192 279 aa9.39□□□□□ -0.91
SNED1-201ENST00000310397 CRYGAP11844 174 aa9.39□□□□□ -0.91
SNED1-201ENST00000310397 RPS28P62857 69 aaKnown RBP9.39□□□□□ -0.91
SNED1-201ENST00000310397 LINC00337Q8N6G1 96 aa9.39□□□□□ -0.91
SNED1-201ENST00000310397 IGLV5-39A0A0G2JS06 123 aa9.38□□□□□ -0.91
SNED1-201ENST00000310397 IGLV1-51P01701 117 aa9.38□□□□□ -0.91
SNED1-201ENST00000310397 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
SNED1-201ENST00000310397 COL4A2P08572 1712 aa9.38□□□□□ -0.91
SNED1-201ENST00000310397 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.38□□□□□ -0.91
SNED1-201ENST00000310397 FASNP49327 2511 aaKnown RBP9.38□□□□□ -0.91
SNED1-201ENST00000310397 Q6ZVQ6 151 aa9.37□□□□□ -0.91
SNED1-201ENST00000310397 TMEM254Q8TBM7 123 aa9.37□□□□□ -0.91
SNED1-201ENST00000310397 LINC01547P58512 204 aaPredicted RBP9.37□□□□□ -0.91
SNED1-201ENST00000310397 SMCPP49901 116 aaPredicted RBP9.37□□□□□ -0.91
SNED1-201ENST00000310397 LINC00208Q96KT6 92 aa9.37□□□□□ -0.91
SNED1-201ENST00000310397 BCE1O60756 84 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 CDSNQ15517 529 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 AVPP01185 164 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 SHISA2Q6UWI4 295 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 Q6ZSN1 163 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 SOSTDC1Q6X4U4 206 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 C7orf33Q8WU49 177 aa9.36□□□□□ -0.91
SNED1-201ENST00000310397 SBSPONQ8IVN8 264 aa9.35□□□□□ -0.91
SNED1-201ENST00000310397 REG3GQ6UW15 175 aa9.35□□□□□ -0.91
SNED1-201ENST00000310397 INAFM1C9JVW0 142 aa9.34□□□□□ -0.91
SNED1-201ENST00000310397 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
SNED1-201ENST00000310397 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
SNED1-201ENST00000310397 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
SNED1-201ENST00000310397 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
SNED1-201ENST00000310397 SPINK6Q6UWN8 80 aa9.32□□□□□ -0.92
SNED1-201ENST00000310397 PLAC8L1A1L4L8 177 aa9.32□□□□□ -0.92
SNED1-201ENST00000310397 LINC00315P59091 139 aa9.32□□□□□ -0.92
SNED1-201ENST00000310397 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
SNED1-201ENST00000310397 TRBV7-6A0A0J9YX20 115 aa9.31□□□□□ -0.92
SNED1-201ENST00000310397 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
SNED1-201ENST00000310397 ESRGQ1W209 222 aa9.31□□□□□ -0.92
SNED1-201ENST00000310397 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
SNED1-201ENST00000310397 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
SNED1-201ENST00000310397 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
SNED1-201ENST00000310397 IGHV3OR16-9A0A0B4J2B5 98 aa9.3□□□□□ -0.92
SNED1-201ENST00000310397 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
SNED1-201ENST00000310397 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SNED1-201ENST00000310397 C11orf72Q8NBR9 251 aa9.29□□□□□ -0.92
SNED1-201ENST00000310397 HCG22E2RYF7 251 aa9.28□□□□□ -0.92
SNED1-201ENST00000310397 H0Y9P7 68 aa9.27□□□□□ -0.93
SNED1-201ENST00000310397 LY6G6DO95868 133 aa9.27□□□□□ -0.93
SNED1-201ENST00000310397 PSPHP1O15172 72 aa9.27□□□□□ -0.93
SNED1-201ENST00000310397 A0A0C4DFX4 3053 aa9.27□□□□□ -0.93
SNED1-201ENST00000310397 C6orf223Q8N319 242 aa9.27□□□□□ -0.93
SNED1-201ENST00000310397 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
SNED1-201ENST00000310397 LIMD2Q9BT23 127 aa9.26□□□□□ -0.93
SNED1-201ENST00000310397 RETNQ9HD89 108 aa9.25□□□□□ -0.93
SNED1-201ENST00000310397 C16orf95Q9H693 158 aa9.25□□□□□ -0.93
SNED1-201ENST00000310397 A8MTW9 85 aa9.24□□□□□ -0.93
SNED1-201ENST00000310397 Q8N2B8 174 aa9.24□□□□□ -0.93
SNED1-201ENST00000310397 A0A1W2PPR1 153 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms