RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 CKS1BP61024 79 aa9.43□□□□□ -0.9
EIF3F-201ENST00000309828 SPAG11BQ08648 103 aa9.43□□□□□ -0.9
EIF3F-201ENST00000309828 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
EIF3F-201ENST00000309828 COPS9Q8WXC6 57 aa9.43□□□□□ -0.9
EIF3F-201ENST00000309828 F8WDY8 70 aa9.42□□□□□ -0.9
EIF3F-201ENST00000309828 FXYD2P54710 66 aa9.42□□□□□ -0.9
EIF3F-201ENST00000309828 WWC2-AS2Q96NR7 200 aa9.42□□□□□ -0.9
EIF3F-201ENST00000309828 PPDPFQ9H3Y8 114 aa9.42□□□□□ -0.9
EIF3F-201ENST00000309828 Q9HAA7 133 aa9.42□□□□□ -0.9
EIF3F-201ENST00000309828 DYNC2H1Q8NCM8 4307 aaKnown RBP9.42□□□□□ -0.9
EIF3F-201ENST00000309828 RPL24P83731 157 aaKnown RBP9.41□□□□□ -0.9
EIF3F-201ENST00000309828 TTC32Q5I0X7 151 aa9.41□□□□□ -0.9
EIF3F-201ENST00000309828 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
EIF3F-201ENST00000309828 SMIM13P0DJ93 91 aa9.39□□□□□ -0.91
EIF3F-201ENST00000309828 COX17Q14061 63 aa9.39□□□□□ -0.91
EIF3F-201ENST00000309828 MUSTN1Q8IVN3 82 aa9.39□□□□□ -0.91
EIF3F-201ENST00000309828 NTN5Q8WTR8 489 aaPredicted RBP9.39□□□□□ -0.91
EIF3F-201ENST00000309828 ERG28Q9UKR5 140 aa9.39□□□□□ -0.91
EIF3F-201ENST00000309828 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
EIF3F-201ENST00000309828 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
EIF3F-201ENST00000309828 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
EIF3F-201ENST00000309828 C2orf48Q96LS8 159 aa9.38□□□□□ -0.91
EIF3F-201ENST00000309828 GVQW2A0A096LPI5 108 aaPredicted RBP9.37□□□□□ -0.91
EIF3F-201ENST00000309828 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.37□□□□□ -0.91
EIF3F-201ENST00000309828 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
EIF3F-201ENST00000309828 NHP2Q9NX24 153 aaKnown RBP9.37□□□□□ -0.91
EIF3F-201ENST00000309828 NBDYA0A0U1RRE5 68 aa9.36□□□□□ -0.91
EIF3F-201ENST00000309828 LINC00158P58513 81 aa9.36□□□□□ -0.91
EIF3F-201ENST00000309828 LINC00308Q8TCZ7 52 aa9.36□□□□□ -0.91
EIF3F-201ENST00000309828 KRTAP1-5Q9BYS1 174 aa9.36□□□□□ -0.91
EIF3F-201ENST00000309828 A4D1N5 150 aa9.35□□□□□ -0.91
EIF3F-201ENST00000309828 TAX1BP3O14907 124 aa9.35□□□□□ -0.91
EIF3F-201ENST00000309828 DNAH7Q8WXX0 4024 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 TRBV30A0A0K0K1B3 111 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 A0A0U1RRA0 63 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 C6orf223Q8N319 242 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 MIR7-3HGQ8N6C7 128 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 DAND5Q8N907 189 aa9.34□□□□□ -0.91
EIF3F-201ENST00000309828 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
EIF3F-201ENST00000309828 PFN2P35080 140 aa9.33□□□□□ -0.92
EIF3F-201ENST00000309828 HIGD2BQ4VC39 106 aa9.33□□□□□ -0.92
EIF3F-201ENST00000309828 UNQ6190/PRO20217Q6UXQ8 127 aa9.33□□□□□ -0.92
EIF3F-201ENST00000309828 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
EIF3F-201ENST00000309828 USP17L23D6RBM5 183 aa9.32□□□□□ -0.92
EIF3F-201ENST00000309828 C10orf25Q5T742 122 aa9.32□□□□□ -0.92
EIF3F-201ENST00000309828 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 K7ERJ3 54 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 CFC1P0CG37 223 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 NPC2P61916 151 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 LINC00526Q96FQ7 95 aa9.31□□□□□ -0.92
EIF3F-201ENST00000309828 RNF151Q2KHN1 245 aa9.3□□□□□ -0.92
EIF3F-201ENST00000309828 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
EIF3F-201ENST00000309828 SOSTDC1Q6X4U4 206 aa9.3□□□□□ -0.92
EIF3F-201ENST00000309828 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
EIF3F-201ENST00000309828 C6orf48Q9UBA6 75 aa9.3□□□□□ -0.92
EIF3F-201ENST00000309828 PSCAO43653 123 aa9.29□□□□□ -0.92
EIF3F-201ENST00000309828 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
EIF3F-201ENST00000309828 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
EIF3F-201ENST00000309828 A0A1B0GV90 55 aa9.28□□□□□ -0.92
EIF3F-201ENST00000309828 EIF4EBP3O60516 100 aaPredicted RBP9.28□□□□□ -0.92
EIF3F-201ENST00000309828 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
EIF3F-201ENST00000309828 C9orf116Q5BN46 136 aaPredicted RBP9.28□□□□□ -0.92
EIF3F-201ENST00000309828 Q6ZRU5 148 aa9.28□□□□□ -0.92
EIF3F-201ENST00000309828 SND1-IT1Q9HBX3 110 aa9.27□□□□□ -0.93
EIF3F-201ENST00000309828 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.93
EIF3F-201ENST00000309828 Q6ZR54 194 aa9.26□□□□□ -0.93
EIF3F-201ENST00000309828 CARD19Q96LW7 228 aa9.26□□□□□ -0.93
EIF3F-201ENST00000309828 NDUFC2O95298 119 aa9.25□□□□□ -0.93
EIF3F-201ENST00000309828 PGPEP1Q9NXJ5 209 aa9.25□□□□□ -0.93
EIF3F-201ENST00000309828 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
EIF3F-201ENST00000309828 H3BUT2 72 aa9.24□□□□□ -0.93
EIF3F-201ENST00000309828 TLX1NBP0CAT3 122 aa9.24□□□□□ -0.93
EIF3F-201ENST00000309828 Q6ZRN7 208 aaPredicted RBP9.24□□□□□ -0.93
EIF3F-201ENST00000309828 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
EIF3F-201ENST00000309828 TRAV13-2A0A0B4J235 113 aa9.23□□□□□ -0.93
EIF3F-201ENST00000309828 TSPAN13O95857 204 aa9.23□□□□□ -0.93
EIF3F-201ENST00000309828 STARD9Q9P2P6 4700 aa9.22□□□□□ -0.93
EIF3F-201ENST00000309828 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
EIF3F-201ENST00000309828 LECT2O14960 151 aa9.22□□□□□ -0.93
EIF3F-201ENST00000309828 LY6G6CO95867 125 aa9.22□□□□□ -0.93
EIF3F-201ENST00000309828 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
EIF3F-201ENST00000309828 PLECQ15149 4684 aaKnown RBP9.21□□□□□ -0.93
EIF3F-201ENST00000309828 DNAH1Q9P2D7 4330 aa9.21□□□□□ -0.93
EIF3F-201ENST00000309828 M0R2N4 97 aa9.21□□□□□ -0.94
EIF3F-201ENST00000309828 SLPIP03973 132 aa9.21□□□□□ -0.94
EIF3F-201ENST00000309828 FABP2P12104 132 aa9.21□□□□□ -0.94
EIF3F-201ENST00000309828 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.94
EIF3F-201ENST00000309828 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.94
EIF3F-201ENST00000309828 IGKV2-28A0A075B6P5 120 aa9.2□□□□□ -0.94
EIF3F-201ENST00000309828 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
EIF3F-201ENST00000309828 IGKV2D-28P01615 120 aa9.2□□□□□ -0.94
EIF3F-201ENST00000309828 RPL13AP40429 203 aaKnown RBP9.2□□□□□ -0.94
EIF3F-201ENST00000309828 WFDC2Q14508 124 aa9.2□□□□□ -0.94
EIF3F-201ENST00000309828 VAMP3Q15836 100 aa9.2□□□□□ -0.94
EIF3F-201ENST00000309828 Q1RN00 199 aa9.19□□□□□ -0.94
EIF3F-201ENST00000309828 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms