RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TMEM86BQ8N661 226 aa7.89□□□□□ -1.15
PTPN7-201ENST00000309017 C22orf24Q9Y442 160 aa7.89□□□□□ -1.15
PTPN7-201ENST00000309017 IGLV4-60A0A075B6I1 120 aa7.89□□□□□ -1.15
PTPN7-201ENST00000309017 DEFB130BP0DP73 79 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 DEFB130AP0DP74 79 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 IBA57-AS1B1ANH7 110 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 FAM19A3Q7Z5A8 133 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 BBC3Q96PG8 261 aaPredicted RBP7.87□□□□□ -1.15
PTPN7-201ENST00000309017 WFDC10AQ9H1F0 79 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 J3QKU1 62 aa7.87□□□□□ -1.15
PTPN7-201ENST00000309017 USP17L23D6RBM5 183 aa7.86□□□□□ -1.15
PTPN7-201ENST00000309017 PLA2G2AP14555 144 aa7.86□□□□□ -1.15
PTPN7-201ENST00000309017 NIPBLQ6KC79 2804 aaeCLIP7.86□□□□□ -1.15
PTPN7-201ENST00000309017 Q6JHZ5 121 aa7.86□□□□□ -1.15
PTPN7-201ENST00000309017 FAM19A5Q7Z5A7 132 aaPredicted RBP7.85□□□□□ -1.15
PTPN7-201ENST00000309017 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 CCL24O00175 119 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 WFDC9Q8NEX5 89 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 C16orf74Q96GX8 76 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 TEX15Q9BXT5 2789 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 A0A096LPF7 62 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 TRBV6-8A0A0A6YYG3 113 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 CRYGAP11844 174 aa7.85□□□□□ -1.15
PTPN7-201ENST00000309017 FBN2P35556 2912 aa7.84□□□□□ -1.15
PTPN7-201ENST00000309017 IGHV4-31P0DP07 118 aa7.84□□□□□ -1.15
PTPN7-201ENST00000309017 FLNAP21333 2647 aaKnown RBP7.84□□□□□ -1.15
PTPN7-201ENST00000309017 MXRA5Q9NR99 2828 aa7.84□□□□□ -1.15
PTPN7-201ENST00000309017 IGHV3OR16-9A0A0B4J2B5 98 aa7.84□□□□□ -1.16
PTPN7-201ENST00000309017 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.16
PTPN7-201ENST00000309017 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 SS18Q15532 418 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 TRAV25A0A0B4J276 109 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 TRBV6-4A0A1B0GX49 114 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 DSCR8Q96T75 97 aa7.83□□□□□ -1.16
PTPN7-201ENST00000309017 NF1P21359 2839 aa7.82□□□□□ -1.16
PTPN7-201ENST00000309017 A0A087WZ39 114 aa7.82□□□□□ -1.16
PTPN7-201ENST00000309017 COL6A5A8TX70 2615 aa7.82□□□□□ -1.16
PTPN7-201ENST00000309017 HILS1P60008 231 aa7.82□□□□□ -1.16
PTPN7-201ENST00000309017 KIR2DL5BQ8NHK3 375 aa7.82□□□□□ -1.16
PTPN7-201ENST00000309017 LINC00959A0A1B0GUT2 108 aa7.81□□□□□ -1.16
PTPN7-201ENST00000309017 GHRHP01286 108 aa7.81□□□□□ -1.16
PTPN7-201ENST00000309017 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
PTPN7-201ENST00000309017 UBL5Q9BZL1 73 aa7.81□□□□□ -1.16
PTPN7-201ENST00000309017 CYSTM1Q9H1C7 97 aa7.81□□□□□ -1.16
PTPN7-201ENST00000309017 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 GYPEP15421 78 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 ENHOQ6UWT2 76 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 IGLV10-54A0A075B6I4 117 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 CCKP06307 115 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 TMEM258P61165 79 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 LAMTOR3Q9UHA4 124 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
PTPN7-201ENST00000309017 TMEM256-PLSCR3K7ERE1 68 aa7.79□□□□□ -1.16
PTPN7-201ENST00000309017 C5orf47Q569G3 176 aa7.78□□□□□ -1.16
PTPN7-201ENST00000309017 FAM19A1Q7Z5A9 133 aa7.78□□□□□ -1.16
PTPN7-201ENST00000309017 ZNF843Q8N446 348 aa7.78□□□□□ -1.16
PTPN7-201ENST00000309017 FHL2Q14192 279 aa7.77□□□□□ -1.16
PTPN7-201ENST00000309017 A0A096LNT2 108 aa7.77□□□□□ -1.17
PTPN7-201ENST00000309017 HAMPP81172 84 aa7.77□□□□□ -1.17
PTPN7-201ENST00000309017 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
PTPN7-201ENST00000309017 C6orf99Q4VX62 202 aa7.77□□□□□ -1.17
PTPN7-201ENST00000309017 Q8N814 137 aa7.77□□□□□ -1.17
PTPN7-201ENST00000309017 FSHBP01225 129 aa7.76□□□□□ -1.17
PTPN7-201ENST00000309017 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
PTPN7-201ENST00000309017 DPH3Q96FX2 82 aa7.76□□□□□ -1.17
PTPN7-201ENST00000309017 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
PTPN7-201ENST00000309017 OBSCN-AS1Q96MR7 158 aa7.75□□□□□ -1.17
PTPN7-201ENST00000309017 UPK3BQ9BT76 320 aa7.75□□□□□ -1.17
PTPN7-201ENST00000309017 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
PTPN7-201ENST00000309017 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
PTPN7-201ENST00000309017 DNAJC9-AS1A6NH13 148 aa7.75□□□□□ -1.17
PTPN7-201ENST00000309017 GIG44P09565 113 aaPredicted RBP7.75□□□□□ -1.17
PTPN7-201ENST00000309017 KRTAP10-9P60411 292 aa7.75□□□□□ -1.17
PTPN7-201ENST00000309017 Q8IZM0 81 aa7.74□□□□□ -1.17
PTPN7-201ENST00000309017 LINC00269Q8N2A0 174 aa7.74□□□□□ -1.17
PTPN7-201ENST00000309017 ESM1Q9NQ30 184 aa7.74□□□□□ -1.17
PTPN7-201ENST00000309017 NOTCH1P46531 2555 aa7.74□□□□□ -1.17
PTPN7-201ENST00000309017 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
PTPN7-201ENST00000309017 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
PTPN7-201ENST00000309017 ATP5EP2Q5VTU8 51 aa7.73□□□□□ -1.17
PTPN7-201ENST00000309017 NBEAL2Q6ZNJ1 2754 aa7.73□□□□□ -1.17
PTPN7-201ENST00000309017 LY6G6DO95868 133 aa7.72□□□□□ -1.17
PTPN7-201ENST00000309017 CR1P17927 2039 aa7.72□□□□□ -1.17
PTPN7-201ENST00000309017 DEFB113Q30KQ7 82 aa7.72□□□□□ -1.17
PTPN7-201ENST00000309017 CHCHD10Q8WYQ3 142 aaPredicted RBP7.71□□□□□ -1.18
PTPN7-201ENST00000309017 DEFB4AO15263 64 aa7.7□□□□□ -1.18
PTPN7-201ENST00000309017 HRCT1Q6UXD1 115 aa7.7□□□□□ -1.18
PTPN7-201ENST00000309017 HTN3P15516 51 aa7.7□□□□□ -1.18
PTPN7-201ENST00000309017 PRO0255Q9UI72 69 aa7.69□□□□□ -1.18
PTPN7-201ENST00000309017 NANOS2P60321 138 aaKnown RBP7.69□□□□□ -1.18
PTPN7-201ENST00000309017 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
PTPN7-201ENST00000309017 NDUFC2O95298 119 aa7.68□□□□□ -1.18
PTPN7-201ENST00000309017 REG3AQ06141 175 aa7.68□□□□□ -1.18
PTPN7-201ENST00000309017 CD164L2Q6UWJ8 174 aa7.68□□□□□ -1.18
PTPN7-201ENST00000309017 Q8N3U1 123 aa7.68□□□□□ -1.18
PTPN7-201ENST00000309017 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
PTPN7-201ENST00000309017 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms