RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 NTM-AS1Q6ZSK4 140 aa8.06□□□□□ -1.12
PCDHGC3-201ENST00000308177 MUC7Q8TAX7 377 aa8.06□□□□□ -1.12
PCDHGC3-201ENST00000308177 TRAV23DV6A0A075B6W5 121 aa8.05□□□□□ -1.12
PCDHGC3-201ENST00000308177 B5MCH6 92 aa8.05□□□□□ -1.12
PCDHGC3-201ENST00000308177 ATOX1O00244 68 aa8.04□□□□□ -1.12
PCDHGC3-201ENST00000308177 C9orf116Q5BN46 136 aaPredicted RBP8.04□□□□□ -1.12
PCDHGC3-201ENST00000308177 A0A1B0GX51 115 aa8.04□□□□□ -1.12
PCDHGC3-201ENST00000308177 HIGD2AQ9BW72 106 aa8.04□□□□□ -1.12
PCDHGC3-201ENST00000308177 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.04□□□□□ -1.12
PCDHGC3-201ENST00000308177 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
PCDHGC3-201ENST00000308177 M0R378 163 aa8.03□□□□□ -1.12
PCDHGC3-201ENST00000308177 FAM19A5Q7Z5A7 132 aaPredicted RBP8.03□□□□□ -1.12
PCDHGC3-201ENST00000308177 Q6ZQY7 126 aa8.03□□□□□ -1.12
PCDHGC3-201ENST00000308177 CELSR3Q9NYQ7 3312 aa8.02□□□□□ -1.12
PCDHGC3-201ENST00000308177 USP24Q9UPU5 2620 aa8.02□□□□□ -1.13
PCDHGC3-201ENST00000308177 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
PCDHGC3-201ENST00000308177 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 CELA1Q9UNI1 258 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 RPL28P46779 137 aaKnown RBP8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 ATRQ13535 2644 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
PCDHGC3-201ENST00000308177 X6R8D5 127 aa8□□□□□ -1.13
PCDHGC3-201ENST00000308177 IGHV3OR16-9A0A0B4J2B5 98 aa8□□□□□ -1.13
PCDHGC3-201ENST00000308177 WFDC10BQ8IUB3 73 aa8□□□□□ -1.13
PCDHGC3-201ENST00000308177 ZNF73O43830 326 aaPredicted RBP7.99□□□□□ -1.13
PCDHGC3-201ENST00000308177 PRR3P79522 188 aaKnown RBP7.99□□□□□ -1.13
PCDHGC3-201ENST00000308177 FAM19A1Q7Z5A9 133 aa7.99□□□□□ -1.13
PCDHGC3-201ENST00000308177 A8MTW9 85 aa7.99□□□□□ -1.13
PCDHGC3-201ENST00000308177 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
PCDHGC3-201ENST00000308177 LINC01561Q8N1V8 128 aa7.98□□□□□ -1.13
PCDHGC3-201ENST00000308177 B9D2Q9BPU9 175 aa7.98□□□□□ -1.13
PCDHGC3-201ENST00000308177 COL6A3P12111 3177 aa7.98□□□□□ -1.13
PCDHGC3-201ENST00000308177 IGLV5-45A0A087WSX0 123 aa7.97□□□□□ -1.13
PCDHGC3-201ENST00000308177 MGAM2Q2M2H8 2515 aa7.97□□□□□ -1.13
PCDHGC3-201ENST00000308177 C6orf223Q8N319 242 aa7.97□□□□□ -1.13
PCDHGC3-201ENST00000308177 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
PCDHGC3-201ENST00000308177 LOC107984640A0A0U1RRK4 108 aa7.96□□□□□ -1.13
PCDHGC3-201ENST00000308177 XGP55808 180 aa7.96□□□□□ -1.14
PCDHGC3-201ENST00000308177 SMIM20Q8N5G0 67 aa7.96□□□□□ -1.14
PCDHGC3-201ENST00000308177 FRYQ5TBA9 3013 aa7.96□□□□□ -1.14
PCDHGC3-201ENST00000308177 TRBV10-3A0A0K0K1G6 114 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 BPY2O14599 106 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 KRTAP24-1Q3LI83 254 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 UPK3BQ9BT76 320 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 NDUFB1O75438 58 aa7.95□□□□□ -1.14
PCDHGC3-201ENST00000308177 M0R2N4 97 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 NDUFC2O95298 119 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 CCKP06307 115 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 ATP5EP2Q5VTU8 51 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 DHRS4-AS1Q9P1J3 65 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
PCDHGC3-201ENST00000308177 A0A087WYN8 130 aa7.93□□□□□ -1.14
PCDHGC3-201ENST00000308177 Q8N814 137 aa7.93□□□□□ -1.14
PCDHGC3-201ENST00000308177 USP34Q70CQ2 3546 aa7.93□□□□□ -1.14
PCDHGC3-201ENST00000308177 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
PCDHGC3-201ENST00000308177 A0A096LNI7 61 aa7.93□□□□□ -1.14
PCDHGC3-201ENST00000308177 IGSF10Q6WRI0 2623 aa7.92□□□□□ -1.14
PCDHGC3-201ENST00000308177 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
PCDHGC3-201ENST00000308177 ENHOQ6UWT2 76 aa7.92□□□□□ -1.14
PCDHGC3-201ENST00000308177 NDUFS5O43920 106 aa7.92□□□□□ -1.14
PCDHGC3-201ENST00000308177 WFDC9Q8NEX5 89 aa7.92□□□□□ -1.14
PCDHGC3-201ENST00000308177 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
PCDHGC3-201ENST00000308177 FAM240AA0A1B0GVK7 77 aa7.91□□□□□ -1.14
PCDHGC3-201ENST00000308177 SCXQ7RTU7 201 aa7.91□□□□□ -1.14
PCDHGC3-201ENST00000308177 Q8NAQ8 132 aa7.91□□□□□ -1.14
PCDHGC3-201ENST00000308177 CSNK1G2-AS1Q8NCQ2 148 aa7.91□□□□□ -1.14
PCDHGC3-201ENST00000308177 MAST4O15021 2626 aa7.9□□□□□ -1.14
PCDHGC3-201ENST00000308177 Q6Q795 121 aa7.9□□□□□ -1.15
PCDHGC3-201ENST00000308177 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 ESRGQ1W209 222 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 SBSPONQ8IVN8 264 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 REV3LO60673 3130 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 M0QXV9 152 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 Q6ZRU5 148 aa7.89□□□□□ -1.15
PCDHGC3-201ENST00000308177 C3orf84H3BNL1 204 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 J3KT08 172 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 F8WDY8 70 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 C19orf73Q9NVV2 129 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 UQCRQO14949 82 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 SOSTDC1Q6X4U4 206 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 TNRC18O15417 2968 aaPredicted RBP7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 EYSQ5T1H1 3165 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 BOD1L1Q8NFC6 3051 aa7.88□□□□□ -1.15
PCDHGC3-201ENST00000308177 GIG44P09565 113 aaPredicted RBP7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 MP68P56378 58 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 SPTBN5Q9NRC6 3674 aaKnown RBP7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 KRTAP1-1Q07627 177 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 FRYLO94915 3013 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 H3BNG1 76 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 H0Y9J4 135 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 Q8N3U1 123 aa7.87□□□□□ -1.15
PCDHGC3-201ENST00000308177 PPDPFQ9H3Y8 114 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms