RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 WFDC9Q8NEX5 89 aa7.88□□□□□ -1.15
LSM3-201ENST00000306024 LITAFQ99732 161 aa7.88□□□□□ -1.15
LSM3-201ENST00000306024 NIPBLQ6KC79 2804 aaeCLIP7.88□□□□□ -1.155e-11■■□□□ 12.8
LSM3-201ENST00000306024 CYSRT1A8MQ03 144 aa7.88□□□□□ -1.15
LSM3-201ENST00000306024 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
LSM3-201ENST00000306024 HAMPP81172 84 aa7.87□□□□□ -1.15
LSM3-201ENST00000306024 KRTAP24-1Q3LI83 254 aa7.87□□□□□ -1.15
LSM3-201ENST00000306024 LINC00846Q9NV44 126 aa7.87□□□□□ -1.15
LSM3-201ENST00000306024 LINC01600Q96MT4 127 aa7.87□□□□□ -1.15
LSM3-201ENST00000306024 NBPF19A0A087WUL8 3843 aa7.87□□□□□ -1.15
LSM3-201ENST00000306024 SLPIP03973 132 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 FAM222AQ5U5X8 452 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 PRO0628Q9UI54 55 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 ENHOQ6UWT2 76 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 MAP6D1Q9H9H5 199 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 STAB1Q9NY15 2570 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 C2orf48Q96LS8 159 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 C11orf68Q9H3H3 251 aaKnown RBP7.86□□□□□ -1.15
LSM3-201ENST00000306024 ORMDL1Q9P0S3 153 aa7.86□□□□□ -1.15
LSM3-201ENST00000306024 H0YGX0 51 aa7.85□□□□□ -1.15
LSM3-201ENST00000306024 LINC00467Q9BRT7 94 aa7.85□□□□□ -1.15
LSM3-201ENST00000306024 INSP01308 110 aa7.85□□□□□ -1.15
LSM3-201ENST00000306024 MIR7-3HGQ8N6C7 128 aa7.85□□□□□ -1.15
LSM3-201ENST00000306024 SVEP1Q4LDE5 3571 aa7.84□□□□□ -1.15
LSM3-201ENST00000306024 V9GYY9 64 aa7.84□□□□□ -1.15
LSM3-201ENST00000306024 CYSTM1Q9H1C7 97 aa7.84□□□□□ -1.15
LSM3-201ENST00000306024 MUC4Q99102 2169 aa7.83□□□□□ -1.16
LSM3-201ENST00000306024 KLLNB2CW77 178 aa7.83□□□□□ -1.16
LSM3-201ENST00000306024 FAM218AQ96MZ4 157 aa7.83□□□□□ -1.16
LSM3-201ENST00000306024 OTOGQ6ZRI0 2925 aa7.83□□□□□ -1.16
LSM3-201ENST00000306024 UPK3BQ9BT76 320 aa7.83□□□□□ -1.16
LSM3-201ENST00000306024 LINC00482Q8N8I6 264 aa7.82□□□□□ -1.16
LSM3-201ENST00000306024 LAMTOR3Q9UHA4 124 aa7.82□□□□□ -1.16
LSM3-201ENST00000306024 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
LSM3-201ENST00000306024 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
LSM3-201ENST00000306024 FHL2Q14192 279 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 C9orf85Q96MD7 179 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 WFDC10AQ9H1F0 79 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 UBE2D4Q9Y2X8 147 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 KRTAP10-3P60369 221 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 A0A087WYN8 130 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 IGLV1-51P01701 117 aa7.81□□□□□ -1.16
LSM3-201ENST00000306024 XCL1P47992 114 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 NDUFC2-KCTD14E9PQ53 114 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 LINC00336Q6ZUF6 198 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
LSM3-201ENST00000306024 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
LSM3-201ENST00000306024 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
LSM3-201ENST00000306024 LINC01561Q8N1V8 128 aa7.79□□□□□ -1.16
LSM3-201ENST00000306024 MGAM2Q2M2H8 2515 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 JMJD7-PLA2G4BH0Y9G9 81 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 COX6A2Q02221 97 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 C6orf226Q5I0X4 101 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 RPL28P46779 137 aaKnown RBP7.78□□□□□ -1.16
LSM3-201ENST00000306024 ATP5EP2Q5VTU8 51 aa7.78□□□□□ -1.16
LSM3-201ENST00000306024 TRGV2A0A075B6R0 118 aa7.77□□□□□ -1.17
LSM3-201ENST00000306024 OXTP01178 125 aa7.77□□□□□ -1.17
LSM3-201ENST00000306024 F8WEM9 126 aa7.76□□□□□ -1.17
LSM3-201ENST00000306024 APOC4P55056 127 aa7.76□□□□□ -1.17
LSM3-201ENST00000306024 Q5XG85 94 aa7.76□□□□□ -1.17
LSM3-201ENST00000306024 PRM2P04554 102 aa7.76□□□□□ -1.17
LSM3-201ENST00000306024 COX7B2Q8TF08 81 aa7.76□□□□□ -1.17
LSM3-201ENST00000306024 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
LSM3-201ENST00000306024 SEC61GP60059 68 aa7.75□□□□□ -1.17
LSM3-201ENST00000306024 CHCHD7Q9BUK0 85 aa7.75□□□□□ -1.17
LSM3-201ENST00000306024 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
LSM3-201ENST00000306024 CCKP06307 115 aa7.75□□□□□ -1.17
LSM3-201ENST00000306024 LINC00337Q8N6G1 96 aa7.74□□□□□ -1.17
LSM3-201ENST00000306024 NOTCH1P46531 2555 aa7.74□□□□□ -1.17
LSM3-201ENST00000306024 DEFB135Q30KP9 77 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 Q9UF83 564 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 DEFB130BP0DP73 79 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 DEFB130AP0DP74 79 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 HTN3P15516 51 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 TRAV7A0A075B6U4 112 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 RMI2Q96E14 147 aa7.73□□□□□ -1.17
LSM3-201ENST00000306024 TMEM256-PLSCR3K7ERE1 68 aa7.72□□□□□ -1.17
LSM3-201ENST00000306024 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
LSM3-201ENST00000306024 NOP10Q9NPE3 64 aaKnown RBP7.71□□□□□ -1.17
LSM3-201ENST00000306024 VPS13CQ709C8 3753 aa7.71□□□□□ -1.18
LSM3-201ENST00000306024 CCL18P55774 89 aa7.71□□□□□ -1.18
LSM3-201ENST00000306024 TRGV4A0A0C4DH28 118 aa7.7□□□□□ -1.18
LSM3-201ENST00000306024 PRB2P02812 416 aaPredicted RBP7.7□□□□□ -1.18
LSM3-201ENST00000306024 BEAN1Q3B7T3 259 aa7.7□□□□□ -1.18
LSM3-201ENST00000306024 Q6ZSN1 163 aa7.7□□□□□ -1.18
LSM3-201ENST00000306024 SCXQ7RTU7 201 aa7.7□□□□□ -1.18
LSM3-201ENST00000306024 IGLV5-39A0A0G2JS06 123 aa7.7□□□□□ -1.18
LSM3-201ENST00000306024 F8WDY8 70 aa7.69□□□□□ -1.18
LSM3-201ENST00000306024 DEFB4AO15263 64 aa7.69□□□□□ -1.18
LSM3-201ENST00000306024 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
LSM3-201ENST00000306024 DAD1P61803 113 aa7.68□□□□□ -1.18
LSM3-201ENST00000306024 SPATA3Q8NHX4 192 aa7.68□□□□□ -1.18
LSM3-201ENST00000306024 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms