RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 A0A1W2PPM0 123 aa9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 UBE2WQ96B02 151 aa9.93□□□□□ -0.82
SHCBP1-201ENST00000303383 IGLL5B9A064 214 aa9.92□□□□□ -0.82
SHCBP1-201ENST00000303383 COPS9Q8WXC6 57 aa9.92□□□□□ -0.82
SHCBP1-201ENST00000303383 WFDC10BQ8IUB3 73 aa9.92□□□□□ -0.82
SHCBP1-201ENST00000303383 SPCS1Q9Y6A9 102 aa9.92□□□□□ -0.82
SHCBP1-201ENST00000303383 A0A1B0GWB2 263 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 ESRGQ1W209 222 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 LITAFQ99732 161 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 K7EP34 96 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 IFITM1P13164 125 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 C15orf53Q8NAA6 179 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 Q1RN00 199 aa9.91□□□□□ -0.82
SHCBP1-201ENST00000303383 CFC1BP0CG36 223 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 CFC1P0CG37 223 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 PRO1854Q9UHT4 67 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 ANK2Q01484 3957 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 H7C2G1 150 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 LINC00158P58513 81 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 SFTA2Q6UW10 78 aa9.9□□□□□ -0.82
SHCBP1-201ENST00000303383 LOC107984156A0A0G2JMH3 177 aa9.89□□□□□ -0.83
SHCBP1-201ENST00000303383 J3QR89 54 aa9.89□□□□□ -0.83
SHCBP1-201ENST00000303383 ARL17AQ8IVW1 177 aa9.89□□□□□ -0.83
SHCBP1-201ENST00000303383 SEC61GP60059 68 aa9.88□□□□□ -0.83
SHCBP1-201ENST00000303383 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
SHCBP1-201ENST00000303383 PSMB2P49721 201 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 Q8IZM0 81 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 PFN2P35080 140 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 LYRM7Q5U5X0 104 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 DNAH3Q8TD57 4116 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 SCGB1C2P0DMR2 95 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 CCL18P55774 89 aa9.87□□□□□ -0.83
SHCBP1-201ENST00000303383 A0A0B4J2C4 111 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 CCDC179H3BU77 68 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 LINC00308Q8TCZ7 52 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 B9D2Q9BPU9 175 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 PRR34Q9NV39 138 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 ENHOQ6UWT2 76 aa9.86□□□□□ -0.83
SHCBP1-201ENST00000303383 FOXI1Q12951 378 aa9.85□□□□□ -0.83
SHCBP1-201ENST00000303383 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
SHCBP1-201ENST00000303383 NHLRC4P0CG21 123 aaPredicted RBP9.84□□□□□ -0.83
SHCBP1-201ENST00000303383 IBA57-AS1B1ANH7 110 aa9.84□□□□□ -0.83
SHCBP1-201ENST00000303383 CXCL5P42830 114 aa9.84□□□□□ -0.83
SHCBP1-201ENST00000303383 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
SHCBP1-201ENST00000303383 MT-ATP8P03928 68 aa9.84□□□□□ -0.83
SHCBP1-201ENST00000303383 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
SHCBP1-201ENST00000303383 C1orf43Q9BWL3 253 aa9.83□□□□□ -0.84
SHCBP1-201ENST00000303383 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
SHCBP1-201ENST00000303383 IGKV2D-24A0A075B6R9 120 aa9.81□□□□□ -0.84
SHCBP1-201ENST00000303383 Q9HAA7 133 aa9.81□□□□□ -0.84
SHCBP1-201ENST00000303383 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
SHCBP1-201ENST00000303383 RPL13AP40429 203 aaKnown RBP9.8□□□□□ -0.84
SHCBP1-201ENST00000303383 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
SHCBP1-201ENST00000303383 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
SHCBP1-201ENST00000303383 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
SHCBP1-201ENST00000303383 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
SHCBP1-201ENST00000303383 SND1-IT1Q9HBX3 110 aa9.79□□□□□ -0.84
SHCBP1-201ENST00000303383 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 H3BMG7 143 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 COX6CP09669 75 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
SHCBP1-201ENST00000303383 DNAH10OSP0CZ25 163 aa9.77□□□□□ -0.85
SHCBP1-201ENST00000303383 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
SHCBP1-201ENST00000303383 CDIP1Q9H305 208 aa9.77□□□□□ -0.85
SHCBP1-201ENST00000303383 XGP55808 180 aa9.76□□□□□ -0.85
SHCBP1-201ENST00000303383 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
SHCBP1-201ENST00000303383 C6orf223Q8N319 242 aa9.76□□□□□ -0.85
SHCBP1-201ENST00000303383 HIGD2BQ4VC39 106 aa9.75□□□□□ -0.85
SHCBP1-201ENST00000303383 TRBV20-1A0A075B6N2 111 aa9.75□□□□□ -0.85
SHCBP1-201ENST00000303383 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
SHCBP1-201ENST00000303383 COX17Q14061 63 aa9.75□□□□□ -0.85
SHCBP1-201ENST00000303383 WFDC2Q14508 124 aa9.74□□□□□ -0.85
SHCBP1-201ENST00000303383 C9orf116Q5BN46 136 aaPredicted RBP9.74□□□□□ -0.85
SHCBP1-201ENST00000303383 TRAV13-2A0A0B4J235 113 aa9.74□□□□□ -0.85
SHCBP1-201ENST00000303383 ETDBQ3ZM63 59 aa9.74□□□□□ -0.85
SHCBP1-201ENST00000303383 CAMK2N2Q96S95 79 aa9.73□□□□□ -0.85
SHCBP1-201ENST00000303383 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
SHCBP1-201ENST00000303383 RMI2Q96E14 147 aa9.73□□□□□ -0.85
SHCBP1-201ENST00000303383 TRIAP1O43715 76 aa9.72□□□□□ -0.85
SHCBP1-201ENST00000303383 TRBV30A0A0K0K1B3 111 aa9.72□□□□□ -0.85
SHCBP1-201ENST00000303383 TCL1BO95988 128 aa9.72□□□□□ -0.85
SHCBP1-201ENST00000303383 HUWE1Q7Z6Z7 4374 aaKnown RBP9.71□□□□□ -0.85
SHCBP1-201ENST00000303383 C10orf25Q5T742 122 aa9.71□□□□□ -0.85
SHCBP1-201ENST00000303383 TMEM126AQ9H061 195 aa9.71□□□□□ -0.85
SHCBP1-201ENST00000303383 F8W1H4 67 aa9.7□□□□□ -0.86
SHCBP1-201ENST00000303383 NDUFV3P56181 108 aaKnown RBP9.7□□□□□ -0.86
SHCBP1-201ENST00000303383 ATXN8Q156A1 80 aa9.7□□□□□ -0.86
SHCBP1-201ENST00000303383 NTN5Q8WTR8 489 aaPredicted RBP9.7□□□□□ -0.86
SHCBP1-201ENST00000303383 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
SHCBP1-201ENST00000303383 NUPR2A6NF83 97 aa9.69□□□□□ -0.86
SHCBP1-201ENST00000303383 KRTAP26-1Q6PEX3 210 aa9.68□□□□□ -0.86
SHCBP1-201ENST00000303383 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
SHCBP1-201ENST00000303383 LINC00337Q8N6G1 96 aa9.66□□□□□ -0.86
SHCBP1-201ENST00000303383 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms