RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 TRACP01848 142 aa9.53□□□□□ -0.88
CASC4-201ENST00000299957 C6orf99Q4VX62 202 aa9.53□□□□□ -0.88
CASC4-201ENST00000299957 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
CASC4-201ENST00000299957 FAM19A4Q96LR4 140 aa9.52□□□□□ -0.88
CASC4-201ENST00000299957 FAM110AQ9BQ89 295 aa9.52□□□□□ -0.88
CASC4-201ENST00000299957 PRO0255Q9UI72 69 aa9.52□□□□□ -0.88
CASC4-201ENST00000299957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
CASC4-201ENST00000299957 KLK5Q9Y337 293 aaPredicted RBP9.51□□□□□ -0.89
CASC4-201ENST00000299957 ACYP1P07311 99 aa9.51□□□□□ -0.89
CASC4-201ENST00000299957 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
CASC4-201ENST00000299957 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
CASC4-201ENST00000299957 ITPR2Q14571 2701 aa9.5□□□□□ -0.89
CASC4-201ENST00000299957 A0A087WYN8 130 aa9.5□□□□□ -0.89
CASC4-201ENST00000299957 CITED1Q99966 193 aa9.5□□□□□ -0.89
CASC4-201ENST00000299957 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
CASC4-201ENST00000299957 REG3AQ06141 175 aa9.5□□□□□ -0.89
CASC4-201ENST00000299957 COL6A5A8TX70 2615 aa9.49□□□□□ -0.89
CASC4-201ENST00000299957 ZNF843Q8N446 348 aa9.49□□□□□ -0.89
CASC4-201ENST00000299957 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
CASC4-201ENST00000299957 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
CASC4-201ENST00000299957 LINC00959A0A1B0GUT2 108 aa9.48□□□□□ -0.89
CASC4-201ENST00000299957 CXCL5P42830 114 aa9.48□□□□□ -0.89
CASC4-201ENST00000299957 C20orf197Q8N268 126 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 LINC00337Q8N6G1 96 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 STAB1Q9NY15 2570 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 J3QKU1 62 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 APOC4P55056 127 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
CASC4-201ENST00000299957 NKAPP1Q8N9T2 125 aa9.46□□□□□ -0.89
CASC4-201ENST00000299957 INAFM1C9JVW0 142 aa9.46□□□□□ -0.9
CASC4-201ENST00000299957 GHRHP01286 108 aa9.45□□□□□ -0.9
CASC4-201ENST00000299957 SPART-AS1P0CW21 52 aa9.45□□□□□ -0.9
CASC4-201ENST00000299957 TRBV6-4A0A1B0GX49 114 aa9.45□□□□□ -0.9
CASC4-201ENST00000299957 FAM218AQ96MZ4 157 aa9.45□□□□□ -0.9
CASC4-201ENST00000299957 RBM3P98179 157 aaKnown RBP9.44□□□□□ -0.9
CASC4-201ENST00000299957 Q8N3U1 123 aa9.44□□□□□ -0.9
CASC4-201ENST00000299957 IBA57-AS1B1ANH7 110 aa9.44□□□□□ -0.9
CASC4-201ENST00000299957 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
CASC4-201ENST00000299957 ATOX1O00244 68 aa9.43□□□□□ -0.9
CASC4-201ENST00000299957 TIMM17BO60830 172 aa9.43□□□□□ -0.9
CASC4-201ENST00000299957 Q6ZQY7 126 aa9.42□□□□□ -0.9
CASC4-201ENST00000299957 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
CASC4-201ENST00000299957 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
CASC4-201ENST00000299957 FHL2Q14192 279 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 LRRC75A-AS1Q8N1F1 130 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 LITAFQ99732 161 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 HIVEP1P15822 2718 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 PSCAO43653 123 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 BEAN1Q3B7T3 259 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 TMEM256-PLSCR3K7ERE1 68 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 C9orf66Q5T8R8 295 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
CASC4-201ENST00000299957 MXRA5Q9NR99 2828 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 C3orf22Q8N5N4 141 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 NSD1Q96L73 2696 aaPredicted RBP9.38□□□□□ -0.91
CASC4-201ENST00000299957 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 UQCRQO14949 82 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
CASC4-201ENST00000299957 JMJD7-PLA2G4BH0Y9G9 81 aa9.37□□□□□ -0.91
CASC4-201ENST00000299957 HILS1P60008 231 aa9.37□□□□□ -0.91
CASC4-201ENST00000299957 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
CASC4-201ENST00000299957 C3orf84H3BNL1 204 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 BRI3O95415 125 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 UBE2BP63146 152 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 RETNQ9HD89 108 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 CYSRT1A8MQ03 144 aa9.36□□□□□ -0.91
CASC4-201ENST00000299957 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
CASC4-201ENST00000299957 A0A096LNI7 61 aa9.35□□□□□ -0.91
CASC4-201ENST00000299957 A0A087WZ39 114 aa9.35□□□□□ -0.91
CASC4-201ENST00000299957 IGLV1-51P01701 117 aa9.34□□□□□ -0.91
CASC4-201ENST00000299957 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
CASC4-201ENST00000299957 RPL28P46779 137 aaKnown RBP9.34□□□□□ -0.91
CASC4-201ENST00000299957 UBE2DNLQ8IWF7 75 aa9.34□□□□□ -0.91
CASC4-201ENST00000299957 IGKV2-24A0A0C4DH68 120 aa9.33□□□□□ -0.92
CASC4-201ENST00000299957 CD164L2Q6UWJ8 174 aa9.33□□□□□ -0.92
CASC4-201ENST00000299957 NREPQ16612 68 aa9.33□□□□□ -0.92
CASC4-201ENST00000299957 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
CASC4-201ENST00000299957 J3KT08 172 aa9.32□□□□□ -0.92
CASC4-201ENST00000299957 SBSPONQ8IVN8 264 aa9.31□□□□□ -0.92
CASC4-201ENST00000299957 LY6G6DO95868 133 aa9.31□□□□□ -0.92
CASC4-201ENST00000299957 COX7BP24311 80 aa9.31□□□□□ -0.92
CASC4-201ENST00000299957 NIPBLQ6KC79 2804 aaeCLIP9.31□□□□□ -0.927e-6■□□□□ 10.5
CASC4-201ENST00000299957 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
CASC4-201ENST00000299957 SHISA2Q6UWI4 295 aa9.31□□□□□ -0.92
CASC4-201ENST00000299957 F8WEM9 126 aa9.3□□□□□ -0.92
CASC4-201ENST00000299957 RPL37AP8A6NKH3 93 aa9.3□□□□□ -0.92
CASC4-201ENST00000299957 COX7CP15954 63 aa9.3□□□□□ -0.92
CASC4-201ENST00000299957 APCP25054 2843 aa9.29□□□□□ -0.92
CASC4-201ENST00000299957 FAM240AA0A1B0GVK7 77 aa9.29□□□□□ -0.92
CASC4-201ENST00000299957 TRBV10-3A0A0K0K1G6 114 aa9.29□□□□□ -0.92
CASC4-201ENST00000299957 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
CASC4-201ENST00000299957 KLK9Q2XQG4 91 aa9.29□□□□□ -0.92
CASC4-201ENST00000299957 NHLRC4P0CG21 123 aaPredicted RBP9.28□□□□□ -0.92
CASC4-201ENST00000299957 PPDPFQ9H3Y8 114 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms