RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 TRAV10A0A0B4J240 114 aa15.43■□□□□ 0.06
VSTM4-201ENST00000298454 H7C2G1 150 aa15.42■□□□□ 0.06
VSTM4-201ENST00000298454 LOC107984156A0A0G2JMH3 177 aa15.42■□□□□ 0.06
VSTM4-201ENST00000298454 ARL17AQ8IVW1 177 aa15.42■□□□□ 0.06
VSTM4-201ENST00000298454 Q8IZM0 81 aa15.42■□□□□ 0.06
VSTM4-201ENST00000298454 GAGE12HA6NDE8 117 aa15.41■□□□□ 0.06
VSTM4-201ENST00000298454 MALP21145 153 aa15.41■□□□□ 0.06
VSTM4-201ENST00000298454 UBE2WQ96B02 151 aa15.41■□□□□ 0.06
VSTM4-201ENST00000298454 ERG28Q9UKR5 140 aa15.41■□□□□ 0.06
VSTM4-201ENST00000298454 C2orf82Q6UX34 121 aa15.4■□□□□ 0.06
VSTM4-201ENST00000298454 CRPP02741 224 aa15.39■□□□□ 0.05
VSTM4-201ENST00000298454 MIR7-3HGQ8N6C7 128 aa15.39■□□□□ 0.05
VSTM4-201ENST00000298454 KIAA0087Q14695 138 aa15.38■□□□□ 0.05
VSTM4-201ENST00000298454 H3BMG7 143 aa15.38■□□□□ 0.05
VSTM4-201ENST00000298454 LINC00158P58513 81 aa15.38■□□□□ 0.05
VSTM4-201ENST00000298454 IBA57-AS1B1ANH7 110 aa15.36■□□□□ 0.05
VSTM4-201ENST00000298454 PFN2P35080 140 aa15.36■□□□□ 0.05
VSTM4-201ENST00000298454 Q1RN00 199 aa15.35■□□□□ 0.05
VSTM4-201ENST00000298454 COPS9Q8WXC6 57 aa15.35■□□□□ 0.05
VSTM4-201ENST00000298454 CKS1BP61024 79 aa15.35■□□□□ 0.05
VSTM4-201ENST00000298454 PSMB2P49721 201 aa15.34■□□□□ 0.05
VSTM4-201ENST00000298454 DNAH9Q9NYC9 4486 aa15.34■□□□□ 0.05
VSTM4-201ENST00000298454 CFAP161Q6P656 301 aa15.34■□□□□ 0.05
VSTM4-201ENST00000298454 C15orf53Q8NAA6 179 aa15.34■□□□□ 0.05
VSTM4-201ENST00000298454 TRAV8-4A0A0B4J246 113 aa15.33■□□□□ 0.04
VSTM4-201ENST00000298454 SCGB1C2P0DMR2 95 aa15.32■□□□□ 0.04
VSTM4-201ENST00000298454 LINC01556Q5JQF7 62 aa15.31■□□□□ 0.04
VSTM4-201ENST00000298454 RPL13AP40429 203 aaKnown RBP15.31■□□□□ 0.04
VSTM4-201ENST00000298454 LYRM7Q5U5X0 104 aa15.31■□□□□ 0.04
VSTM4-201ENST00000298454 KLK5Q9Y337 293 aaPredicted RBP15.31■□□□□ 0.04
VSTM4-201ENST00000298454 TCL1BO95988 128 aa15.3■□□□□ 0.04
VSTM4-201ENST00000298454 PPDPFQ9H3Y8 114 aa15.3■□□□□ 0.04
VSTM4-201ENST00000298454 CXCL5P42830 114 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 MTURNQ8N3F0 131 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 COL7A1Q02388 2944 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 SPAG11BQ08648 103 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 C6orf223Q8N319 242 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 LINC00526Q96FQ7 95 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 LINC00588Q9Y4M8 146 aa15.29■□□□□ 0.04
VSTM4-201ENST00000298454 TRIAP1O43715 76 aa15.28■□□□□ 0.04
VSTM4-201ENST00000298454 CCL18P55774 89 aa15.28■□□□□ 0.04
VSTM4-201ENST00000298454 B9D2Q9BPU9 175 aa15.28■□□□□ 0.04
VSTM4-201ENST00000298454 KRTAP26-1Q6PEX3 210 aa15.27■□□□□ 0.04
VSTM4-201ENST00000298454 TRBV30A0A0K0K1B3 111 aa15.26■□□□□ 0.03
VSTM4-201ENST00000298454 SND1-IT1Q9HBX3 110 aa15.26■□□□□ 0.03
VSTM4-201ENST00000298454 DNAH10OSP0CZ25 163 aa15.25■□□□□ 0.03
VSTM4-201ENST00000298454 C9orf116Q5BN46 136 aaPredicted RBP15.25■□□□□ 0.03
VSTM4-201ENST00000298454 TRBV20-1A0A075B6N2 111 aa15.25■□□□□ 0.03
VSTM4-201ENST00000298454 C10orf25Q5T742 122 aa15.25■□□□□ 0.03
VSTM4-201ENST00000298454 UNQ6190/PRO20217Q6UXQ8 127 aa15.24■□□□□ 0.03
VSTM4-201ENST00000298454 PRO0461Q9UI25 63 aa15.24■□□□□ 0.03
VSTM4-201ENST00000298454 F8W1H4 67 aa15.24■□□□□ 0.03
VSTM4-201ENST00000298454 WFDC2Q14508 124 aa15.24■□□□□ 0.03
VSTM4-201ENST00000298454 IGKV2-28A0A075B6P5 120 aa15.22■□□□□ 0.03
VSTM4-201ENST00000298454 IGKV2D-28P01615 120 aa15.22■□□□□ 0.03
VSTM4-201ENST00000298454 C1orf43Q9BWL3 253 aa15.21■□□□□ 0.02
VSTM4-201ENST00000298454 STAB2Q8WWQ8 2551 aa15.2■□□□□ 0.02
VSTM4-201ENST00000298454 COX17Q14061 63 aa15.2■□□□□ 0.02
VSTM4-201ENST00000298454 LINC00337Q8N6G1 96 aa15.2■□□□□ 0.02
VSTM4-201ENST00000298454 IGKV2D-24A0A075B6R9 120 aa15.19■□□□□ 0.02
VSTM4-201ENST00000298454 DNHD1Q96M86 4753 aa15.19■□□□□ 0.02
VSTM4-201ENST00000298454 HIGD2BQ4VC39 106 aa15.18■□□□□ 0.02
VSTM4-201ENST00000298454 NTN5Q8WTR8 489 aaPredicted RBP15.18■□□□□ 0.02
VSTM4-201ENST00000298454 Q9HAA7 133 aa15.18■□□□□ 0.02
VSTM4-201ENST00000298454 OCIAD2Q56VL3 154 aa15.18■□□□□ 0.02
VSTM4-201ENST00000298454 SMCPP49901 116 aaPredicted RBP15.17■□□□□ 0.02
VSTM4-201ENST00000298454 TRAV13-2A0A0B4J235 113 aa15.17■□□□□ 0.02
VSTM4-201ENST00000298454 COX6CP09669 75 aa15.17■□□□□ 0.02
VSTM4-201ENST00000298454 C15orf56Q8N910 161 aa15.15■□□□□ 0.02
VSTM4-201ENST00000298454 ATXN8Q156A1 80 aa15.15■□□□□ 0.02
VSTM4-201ENST00000298454 CLEC2BQ92478 149 aa15.15■□□□□ 0.02
VSTM4-201ENST00000298454 ZNF561-AS1K7EIQ3 104 aa15.14■□□□□ 0.01
VSTM4-201ENST00000298454 C6orf48Q9UBA6 75 aa15.14■□□□□ 0.01
VSTM4-201ENST00000298454 ETDBQ3ZM63 59 aa15.13■□□□□ 0.01
VSTM4-201ENST00000298454 UPK3BQ9BT76 320 aa15.12■□□□□ 0.01
VSTM4-201ENST00000298454 GVQW2A0A096LPI5 108 aaPredicted RBP15.11■□□□□ 0.01
VSTM4-201ENST00000298454 PRR3P79522 188 aaKnown RBP15.11■□□□□ 0.01
VSTM4-201ENST00000298454 C9JAW5 83 aa15.1■□□□□ 0.01
VSTM4-201ENST00000298454 CAMK2N2Q96S95 79 aa15.1■□□□□ 0.01
VSTM4-201ENST00000298454 DNAH1Q9P2D7 4330 aa15.1■□□□□ 0.01
VSTM4-201ENST00000298454 LINC01620Q4KN68 170 aa15.09■□□□□ 0.01
VSTM4-201ENST00000298454 Q8NDZ9 215 aa15.08■□□□□ 0.01
VSTM4-201ENST00000298454 NHLRC4P0CG21 123 aaPredicted RBP15.08■□□□□ 0
VSTM4-201ENST00000298454 LST1O00453 97 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 OR13C6PQ8NH95 151 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 APLNQ9ULZ1 77 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 SLC25A20O43772 301 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 RPL28P46779 137 aaKnown RBP15.07■□□□□ 0
VSTM4-201ENST00000298454 Q6ZRU5 148 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 SMIM11BQ8TCY0 68 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 LYSTQ99698 3801 aa15.07■□□□□ 0
VSTM4-201ENST00000298454 K7ERU9 68 aa15.05■□□□□ 0
VSTM4-201ENST00000298454 NDUFC2O95298 119 aa15.05■□□□□ 0
VSTM4-201ENST00000298454 PRKDCP78527 4128 aaKnown RBP15.05■□□□□ 0
VSTM4-201ENST00000298454 DYNC2H1Q8NCM8 4307 aaKnown RBP15.04■□□□□ -0
VSTM4-201ENST00000298454 CASC10Q5T4H9 136 aa15.04■□□□□ -0
VSTM4-201ENST00000298454 MUC7Q8TAX7 377 aa15.04■□□□□ -0
VSTM4-201ENST00000298454 C2orf48Q96LS8 159 aa15.04■□□□□ -0
VSTM4-201ENST00000298454 CSMD3Q7Z407 3707 aa15.01□□□□□ -0.01
VSTM4-201ENST00000298454 NCR3O14931 201 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms