RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FUSP35637 526 aaKnown RBP eCLIP9.72□□□□□ -0.85
HPS3-201ENST00000296051 COX6A2Q02221 97 aa9.72□□□□□ -0.85
HPS3-201ENST00000296051 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
HPS3-201ENST00000296051 DMXL2Q8TDJ6 3036 aa9.71□□□□□ -0.86
HPS3-201ENST00000296051 JMJD7-PLA2G4BH0Y9G9 81 aa9.71□□□□□ -0.86
HPS3-201ENST00000296051 LINC00242Q5T6M2 205 aa9.71□□□□□ -0.86
HPS3-201ENST00000296051 LAMA5O15230 3695 aa9.71□□□□□ -0.86
HPS3-201ENST00000296051 Q9UF83 564 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 CXCL5P42830 114 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 SMIM11BQ8TCY0 68 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 ITPR3Q14573 2671 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 USP17L23D6RBM5 183 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 Q6ZSN1 163 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 STAB1Q9NY15 2570 aa9.7□□□□□ -0.86
HPS3-201ENST00000296051 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
HPS3-201ENST00000296051 TRBV6-8A0A0A6YYG3 113 aa9.69□□□□□ -0.86
HPS3-201ENST00000296051 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
HPS3-201ENST00000296051 KIF25-AS1Q9Y6Z4 181 aa9.69□□□□□ -0.86
HPS3-201ENST00000296051 M0QXV9 152 aa9.69□□□□□ -0.86
HPS3-201ENST00000296051 FLNAP21333 2647 aaKnown RBP9.69□□□□□ -0.86
HPS3-201ENST00000296051 IGLV1-51P01701 117 aa9.68□□□□□ -0.86
HPS3-201ENST00000296051 TRBV6-4A0A1B0GX49 114 aa9.68□□□□□ -0.86
HPS3-201ENST00000296051 TMEM256-PLSCR3K7ERE1 68 aa9.68□□□□□ -0.86
HPS3-201ENST00000296051 C6orf99Q4VX62 202 aa9.68□□□□□ -0.86
HPS3-201ENST00000296051 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
HPS3-201ENST00000296051 NREPQ16612 68 aa9.67□□□□□ -0.86
HPS3-201ENST00000296051 LINC00315P59091 139 aa9.67□□□□□ -0.86
HPS3-201ENST00000296051 AKAP13Q12802 2813 aa9.67□□□□□ -0.86
HPS3-201ENST00000296051 COX7CP15954 63 aa9.67□□□□□ -0.86
HPS3-201ENST00000296051 PRR3P79522 188 aaKnown RBP9.66□□□□□ -0.86
HPS3-201ENST00000296051 TIMM17BO60830 172 aa9.65□□□□□ -0.86
HPS3-201ENST00000296051 Q6Q795 121 aa9.65□□□□□ -0.86
HPS3-201ENST00000296051 CHCHD7Q9BUK0 85 aa9.65□□□□□ -0.86
HPS3-201ENST00000296051 KALRNO60229 2985 aa9.65□□□□□ -0.86
HPS3-201ENST00000296051 SMIM1B2RUZ4 78 aa9.65□□□□□ -0.86
HPS3-201ENST00000296051 COL4A2P08572 1712 aa9.65□□□□□ -0.87
HPS3-201ENST00000296051 SYCNQ0VAF6 134 aa9.65□□□□□ -0.87
HPS3-201ENST00000296051 FHL3Q13643 280 aa9.65□□□□□ -0.87
HPS3-201ENST00000296051 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
HPS3-201ENST00000296051 IMUPQ9GZP8 106 aa9.64□□□□□ -0.87
HPS3-201ENST00000296051 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
HPS3-201ENST00000296051 C5orf47Q569G3 176 aa9.64□□□□□ -0.87
HPS3-201ENST00000296051 Q6ZTC4 211 aa9.64□□□□□ -0.87
HPS3-201ENST00000296051 LINC01546A6NGU7 62 aa9.64□□□□□ -0.87
HPS3-201ENST00000296051 SERP2Q8N6R1 65 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 AMELXQ99217 191 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 Q8N2B8 174 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 B9D2Q9BPU9 175 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 PPDPFQ9H3Y8 114 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
HPS3-201ENST00000296051 A0A087WYN8 130 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 NUPR2A6NF83 97 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 FAM19A1Q7Z5A9 133 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 C16orf95Q9H693 158 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 ADGRG4Q8IZF6 3080 aa9.62□□□□□ -0.87
HPS3-201ENST00000296051 MPLKIPQ8TAP9 179 aa9.61□□□□□ -0.87
HPS3-201ENST00000296051 BRK1Q8WUW1 75 aa9.61□□□□□ -0.87
HPS3-201ENST00000296051 KRTAP24-1Q3LI83 254 aa9.61□□□□□ -0.87
HPS3-201ENST00000296051 LELP1Q5T871 98 aa9.6□□□□□ -0.87
HPS3-201ENST00000296051 NDUFB1O75438 58 aa9.59□□□□□ -0.87
HPS3-201ENST00000296051 TMEM258P61165 79 aa9.59□□□□□ -0.87
HPS3-201ENST00000296051 Q6ZQY7 126 aa9.59□□□□□ -0.87
HPS3-201ENST00000296051 C9orf116Q5BN46 136 aaPredicted RBP9.59□□□□□ -0.87
HPS3-201ENST00000296051 IGLV4-60A0A075B6I1 120 aa9.59□□□□□ -0.87
HPS3-201ENST00000296051 HRCT1Q6UXD1 115 aa9.59□□□□□ -0.87
HPS3-201ENST00000296051 A0A0U1RQV1 116 aa9.58□□□□□ -0.88
HPS3-201ENST00000296051 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
HPS3-201ENST00000296051 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
HPS3-201ENST00000296051 DMXL1Q9Y485 3027 aa9.57□□□□□ -0.88
HPS3-201ENST00000296051 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
HPS3-201ENST00000296051 LINC00846Q9NV44 126 aa9.56□□□□□ -0.88
HPS3-201ENST00000296051 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
HPS3-201ENST00000296051 COX7BP24311 80 aa9.55□□□□□ -0.88
HPS3-201ENST00000296051 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
HPS3-201ENST00000296051 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
HPS3-201ENST00000296051 TACC2O95359 2948 aa9.55□□□□□ -0.88
HPS3-201ENST00000296051 H0Y9J4 135 aa9.55□□□□□ -0.88
HPS3-201ENST00000296051 MP68P56378 58 aa9.54□□□□□ -0.88
HPS3-201ENST00000296051 A8MTW9 85 aa9.54□□□□□ -0.88
HPS3-201ENST00000296051 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
HPS3-201ENST00000296051 EIF4EBP3O60516 100 aaPredicted RBP9.54□□□□□ -0.88
HPS3-201ENST00000296051 C1orf158Q8N1D5 194 aa9.54□□□□□ -0.88
HPS3-201ENST00000296051 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
HPS3-201ENST00000296051 RPL28P46779 137 aaKnown RBP9.53□□□□□ -0.88
HPS3-201ENST00000296051 CD164L2Q6UWJ8 174 aa9.52□□□□□ -0.88
HPS3-201ENST00000296051 SOSTDC1Q6X4U4 206 aa9.52□□□□□ -0.88
HPS3-201ENST00000296051 SBSPONQ8IVN8 264 aa9.52□□□□□ -0.89
HPS3-201ENST00000296051 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
HPS3-201ENST00000296051 COL6A5A8TX70 2615 aa9.52□□□□□ -0.89
HPS3-201ENST00000296051 FAM218AQ96MZ4 157 aa9.52□□□□□ -0.89
HPS3-201ENST00000296051 BPY2O14599 106 aa9.51□□□□□ -0.89
HPS3-201ENST00000296051 TEX15Q9BXT5 2789 aa9.51□□□□□ -0.89
HPS3-201ENST00000296051 Q6JHZ5 121 aa9.5□□□□□ -0.89
HPS3-201ENST00000296051 CHKB-CPT1BH3BT56 60 aa9.5□□□□□ -0.89
HPS3-201ENST00000296051 PRR4Q16378 134 aa9.5□□□□□ -0.89
HPS3-201ENST00000296051 NOTCH1P46531 2555 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms