RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
PTCD1-201ENST00000292478 REG3GQ6UW15 175 aa9.07□□□□□ -0.96
PTCD1-201ENST00000292478 CEP350Q5VT06 3117 aa9.07□□□□□ -0.96
PTCD1-201ENST00000292478 C9orf116Q5BN46 136 aaPredicted RBP9.07□□□□□ -0.96
PTCD1-201ENST00000292478 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
PTCD1-201ENST00000292478 COL4A2P08572 1712 aa9.07□□□□□ -0.96
PTCD1-201ENST00000292478 Q6ZTC4 211 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 A0A087WYN8 130 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 M0R2N4 97 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 C11orf72Q8NBR9 251 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 TRAV7A0A075B6U4 112 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
PTCD1-201ENST00000292478 RETNQ9HD89 108 aa9.05□□□□□ -0.96
PTCD1-201ENST00000292478 C1orf137Q5JT78 98 aa9.05□□□□□ -0.96
PTCD1-201ENST00000292478 PRYO14603 147 aa9.05□□□□□ -0.96
PTCD1-201ENST00000292478 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
PTCD1-201ENST00000292478 CCDC179H3BU77 68 aa9.04□□□□□ -0.96
PTCD1-201ENST00000292478 C6orf223Q8N319 242 aa9.04□□□□□ -0.96
PTCD1-201ENST00000292478 SNURFQ9Y675 71 aa9.04□□□□□ -0.96
PTCD1-201ENST00000292478 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
PTCD1-201ENST00000292478 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
PTCD1-201ENST00000292478 HIVEP3Q5T1R4 2406 aa9.03□□□□□ -0.96
PTCD1-201ENST00000292478 LY6G6CO95867 125 aa9.03□□□□□ -0.96
PTCD1-201ENST00000292478 CENPFP49454 3210 aa9.03□□□□□ -0.96
PTCD1-201ENST00000292478 LINC00315P59091 139 aa9.02□□□□□ -0.97
PTCD1-201ENST00000292478 SPINK6Q6UWN8 80 aa9.02□□□□□ -0.97
PTCD1-201ENST00000292478 IGLV9-49A0A0B4J1Y8 123 aa9.02□□□□□ -0.97
PTCD1-201ENST00000292478 Q8N9L7 120 aa9.02□□□□□ -0.97
PTCD1-201ENST00000292478 PRR3P79522 188 aaKnown RBP9.01□□□□□ -0.97
PTCD1-201ENST00000292478 KLK9Q2XQG4 91 aa9.01□□□□□ -0.97
PTCD1-201ENST00000292478 LINC00575Q6W349 94 aa9.01□□□□□ -0.97
PTCD1-201ENST00000292478 IGF2RP11717 2491 aa9□□□□□ -0.97
PTCD1-201ENST00000292478 PIEZO1Q92508 2521 aa9□□□□□ -0.97
PTCD1-201ENST00000292478 NCOR2Q9Y618 2525 aa9□□□□□ -0.97
PTCD1-201ENST00000292478 FSHBP01225 129 aa9□□□□□ -0.97
PTCD1-201ENST00000292478 HRCT1Q6UXD1 115 aa8.99□□□□□ -0.97
PTCD1-201ENST00000292478 FAM30AQ9NZY2 134 aa8.99□□□□□ -0.97
PTCD1-201ENST00000292478 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
PTCD1-201ENST00000292478 FHL3Q13643 280 aa8.98□□□□□ -0.97
PTCD1-201ENST00000292478 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
PTCD1-201ENST00000292478 SMIM26A0A096LP01 95 aa8.96□□□□□ -0.98
PTCD1-201ENST00000292478 IGHV3OR16-9A0A0B4J2B5 98 aa8.96□□□□□ -0.98
PTCD1-201ENST00000292478 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.98
PTCD1-201ENST00000292478 BPTFQ12830 3046 aa8.96□□□□□ -0.98
PTCD1-201ENST00000292478 NHLRC4P0CG21 123 aaPredicted RBP8.95□□□□□ -0.98
PTCD1-201ENST00000292478 Q6ZRU5 148 aa8.94□□□□□ -0.98
PTCD1-201ENST00000292478 ABCA2Q9BZC7 2435 aa8.94□□□□□ -0.98
PTCD1-201ENST00000292478 IGLV5-52A0A0A0MRZ9 124 aa8.94□□□□□ -0.98
PTCD1-201ENST00000292478 H3BNG1 76 aa8.94□□□□□ -0.98
PTCD1-201ENST00000292478 Q9BRP9 147 aa8.94□□□□□ -0.98
PTCD1-201ENST00000292478 TLN1Q9Y490 2541 aaKnown RBP8.94□□□□□ -0.98
PTCD1-201ENST00000292478 LINC01556Q5JQF7 62 aa8.93□□□□□ -0.98
PTCD1-201ENST00000292478 Q8N3U1 123 aa8.92□□□□□ -0.98
PTCD1-201ENST00000292478 A0A087WVE0 104 aa8.92□□□□□ -0.98
PTCD1-201ENST00000292478 CELA1Q9UNI1 258 aa8.92□□□□□ -0.98
PTCD1-201ENST00000292478 C2CD3Q4AC94 2353 aa8.92□□□□□ -0.98
PTCD1-201ENST00000292478 ESRGQ1W209 222 aa8.91□□□□□ -0.98
PTCD1-201ENST00000292478 Q6ZVQ6 151 aa8.91□□□□□ -0.98
PTCD1-201ENST00000292478 TRBV7-7A0A0K0K1E9 115 aa8.91□□□□□ -0.98
PTCD1-201ENST00000292478 CXCL6P80162 114 aa8.91□□□□□ -0.98
PTCD1-201ENST00000292478 TET2Q6N021 2002 aaPredicted RBP8.9□□□□□ -0.98
PTCD1-201ENST00000292478 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
PTCD1-201ENST00000292478 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
PTCD1-201ENST00000292478 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
PTCD1-201ENST00000292478 C1orf134Q5TEV5 83 aa8.89□□□□□ -0.99
PTCD1-201ENST00000292478 A6NED7 52 aa8.88□□□□□ -0.99
PTCD1-201ENST00000292478 PRR4Q16378 134 aa8.88□□□□□ -0.99
PTCD1-201ENST00000292478 F8P00451 2351 aa8.88□□□□□ -0.99
PTCD1-201ENST00000292478 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
PTCD1-201ENST00000292478 A0A1B0GW54 56 aa8.88□□□□□ -0.99
PTCD1-201ENST00000292478 LINC01547P58512 204 aaPredicted RBP8.87□□□□□ -0.99
PTCD1-201ENST00000292478 CIRBP-AS1Q8TBR5 109 aa8.87□□□□□ -0.99
PTCD1-201ENST00000292478 PTPRBP23467 1997 aa8.87□□□□□ -0.99
PTCD1-201ENST00000292478 A0A087WSZ3 146 aa8.87□□□□□ -0.99
PTCD1-201ENST00000292478 X6R8D5 127 aa8.86□□□□□ -0.99
PTCD1-201ENST00000292478 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
PTCD1-201ENST00000292478 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
PTCD1-201ENST00000292478 BCE1O60756 84 aa8.85□□□□□ -0.99
PTCD1-201ENST00000292478 AGRNO00468 2067 aa8.85□□□□□ -0.99
PTCD1-201ENST00000292478 HCG22E2RYF7 251 aa8.84□□□□□ -0.99
PTCD1-201ENST00000292478 SMCR5Q8TEV8 140 aa8.84□□□□□ -0.99
PTCD1-201ENST00000292478 MYO9AB2RTY4 2548 aa8.83□□□□□ -1
PTCD1-201ENST00000292478 COL27A1Q8IZC6 1860 aaPredicted RBP8.83□□□□□ -1
PTCD1-201ENST00000292478 A8MTW9 85 aa8.83□□□□□ -1
PTCD1-201ENST00000292478 C6orf48Q9UBA6 75 aa8.83□□□□□ -1
PTCD1-201ENST00000292478 TMEM254Q8TBM7 123 aa8.82□□□□□ -1
PTCD1-201ENST00000292478 A0A0U1RQV1 116 aa8.82□□□□□ -1
PTCD1-201ENST00000292478 hDV103S1A0JD37 113 aa8.81□□□□□ -1
PTCD1-201ENST00000292478 SBSPONQ8IVN8 264 aa8.81□□□□□ -1
PTCD1-201ENST00000292478 H0Y9P7 68 aa8.81□□□□□ -1
PTCD1-201ENST00000292478 LIMD2Q9BT23 127 aa8.81□□□□□ -1
PTCD1-201ENST00000292478 PRO0461Q9UI25 63 aa8.81□□□□□ -1
PTCD1-201ENST00000292478 SPATA3Q8NHX4 192 aa8.8□□□□□ -1
PTCD1-201ENST00000292478 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
PTCD1-201ENST00000292478 KIAA0087Q14695 138 aa8.8□□□□□ -1
PTCD1-201ENST00000292478 ELOF1P60002 83 aaKnown RBP8.8□□□□□ -1
PTCD1-201ENST00000292478 PRLHP81277 87 aa8.8□□□□□ -1
PTCD1-201ENST00000292478 PCSK5Q92824 1860 aa8.8□□□□□ -1
PTCD1-201ENST00000292478 SOSTDC1Q6X4U4 206 aa8.79□□□□□ -1
PTCD1-201ENST00000292478 LINC00167Q96N53 147 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms