RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
CCDC58-201ENST00000291458 SCGB3A1Q96QR1 104 aa6.09□□□□□ -1.43
CCDC58-201ENST00000291458 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
CCDC58-201ENST00000291458 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
CCDC58-201ENST00000291458 IGIPA6NJ69 53 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 B5MCH6 92 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 APOC3P02656 99 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 PRSS2P07478 247 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 RHEBQ15382 184 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
CCDC58-201ENST00000291458 AMELXQ99217 191 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 ALKBH7Q9BT30 221 aaPredicted RBP6.08□□□□□ -1.44
CCDC58-201ENST00000291458 GNB1LQ9BYB4 327 aa6.08□□□□□ -1.44
CCDC58-201ENST00000291458 GEMIN7Q9H840 131 aaKnown RBP6.08□□□□□ -1.44
CCDC58-201ENST00000291458 CARHSP1Q9Y2V2 147 aaKnown RBP6.08□□□□□ -1.44
CCDC58-201ENST00000291458 MT-ND6P03923 174 aa6.07□□□□□ -1.44
CCDC58-201ENST00000291458 KIAA0087Q14695 138 aa6.07□□□□□ -1.44
CCDC58-201ENST00000291458 Q6ZRP5 223 aa6.07□□□□□ -1.44
CCDC58-201ENST00000291458 LINC00469Q8N7U9 141 aa6.07□□□□□ -1.44
CCDC58-201ENST00000291458 K7EMI3 77 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 CKS1BP61024 79 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 ODF1Q14990 250 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 PAPPA-AS1Q5QFB9 102 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 C10orf91Q5T1B1 145 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 TIMM17AQ99595 171 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 CDKN2A-AS1Q9UH64 79 aa6.06□□□□□ -1.44
CCDC58-201ENST00000291458 SPINK8P0C7L1 97 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 NDUFA6P56556 154 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 HERVK_113P63121 156 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 PMCHL1Q16048 86 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 NDUFA5Q16718 116 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 C1orf137Q5JT78 98 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 TRAPPC1Q9Y5R8 145 aa6.05□□□□□ -1.44
CCDC58-201ENST00000291458 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 F8WDY8 70 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 M0QXV9 152 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 G0S2P27469 103 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 UBE2BP63146 152 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 COX19Q49B96 90 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 C6orf226Q5I0X4 101 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 ERASQ7Z444 233 aa6.04□□□□□ -1.44
CCDC58-201ENST00000291458 SNAPINO95295 136 aa6.03□□□□□ -1.44
CCDC58-201ENST00000291458 NPSP0C0P6 89 aa6.03□□□□□ -1.44
CCDC58-201ENST00000291458 SEC11AP67812 179 aa6.03□□□□□ -1.44
CCDC58-201ENST00000291458 Q8IZM0 81 aa6.03□□□□□ -1.44
CCDC58-201ENST00000291458 XAGE1AQ9HD64 81 aa6.03□□□□□ -1.44
CCDC58-201ENST00000291458 PKHD1L1Q86WI1 4243 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 SMIM1B2RUZ4 78 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 NDUFC2-KCTD14E9PQ53 114 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 TLX1NBP0CAT3 122 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 C9orf129Q5T035 196 aaKnown RBP6.02□□□□□ -1.45
CCDC58-201ENST00000291458 SPINK6Q6UWN8 80 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 SVBPQ8N300 66 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 C18orf32Q8TCD1 76 aa6.02□□□□□ -1.45
CCDC58-201ENST00000291458 LINC01546A6NGU7 62 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 PMVKQ15126 192 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 SERTAD4-AS1Q5TG53 156 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 REG3GQ6UW15 175 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 FAM19A3Q7Z5A8 133 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 CST9LQ9H4G1 147 aa6.01□□□□□ -1.45
CCDC58-201ENST00000291458 HERC1Q15751 4861 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 A0A096LNJ9 63 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 TINCRA0A1B0GVN0 87 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 F8VRH5 84 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 KRTAP7-1Q8IUC3 87 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 CBLN2Q8IUK8 224 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 URB1-AS1Q96HZ7 61 aa6□□□□□ -1.45
CCDC58-201ENST00000291458 LRP1Q07954 4544 aaKnown RBP6□□□□□ -1.45
CCDC58-201ENST00000291458 HBDP02042 147 aa5.99□□□□□ -1.45
CCDC58-201ENST00000291458 RAB5BP61020 215 aa5.99□□□□□ -1.45
CCDC58-201ENST00000291458 H3BRM9 83 aa5.98□□□□□ -1.45
CCDC58-201ENST00000291458 LINC00614P0C842 121 aa5.98□□□□□ -1.45
CCDC58-201ENST00000291458 CXCL5P42830 114 aa5.98□□□□□ -1.45
CCDC58-201ENST00000291458 PDZD11Q5EBL8 140 aa5.98□□□□□ -1.45
CCDC58-201ENST00000291458 LINC01600Q96MT4 127 aa5.98□□□□□ -1.45
CCDC58-201ENST00000291458 IGLV5-45A0A087WSX0 123 aa5.97□□□□□ -1.45
CCDC58-201ENST00000291458 LINC01549A6NIU2 74 aa5.97□□□□□ -1.45
CCDC58-201ENST00000291458 IGLV7-43P04211 117 aa5.97□□□□□ -1.45
CCDC58-201ENST00000291458 SRSF9Q13242 221 aaKnown RBP eCLIP5.97□□□□□ -1.45
CCDC58-201ENST00000291458 GAGE10A6NGK3 116 aa5.96□□□□□ -1.46
CCDC58-201ENST00000291458 IGLC3P0DOY3 106 aa5.96□□□□□ -1.46
CCDC58-201ENST00000291458 ZNF22P17026 224 aaPredicted RBP5.96□□□□□ -1.46
CCDC58-201ENST00000291458 ZNF625Q96I27 306 aaPredicted RBP5.96□□□□□ -1.46
CCDC58-201ENST00000291458 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
CCDC58-201ENST00000291458 C22orf24Q9Y442 160 aa5.96□□□□□ -1.46
CCDC58-201ENST00000291458 C11orf86A6NJI1 115 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 H0Y8G0 127 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 ATP5LO75964 103 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 PFN2P35080 140 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 TMEM170BQ5T4T1 132 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 FAT3Q8TDW7 4589 aa5.95□□□□□ -1.46
CCDC58-201ENST00000291458 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
CCDC58-201ENST00000291458 SCO1O75880 301 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms