RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 A0A1B0GVG6 124 aa5.29□□□□□ -1.56
TPM3-201ENST00000271850 A0A1B0GW15 77 aa5.29□□□□□ -1.56
TPM3-201ENST00000271850 TGIF2-C20orf24A0A0A6YYL0 155 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 UBE2BP63146 152 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 ANKRD39Q53RE8 183 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 LINC00469Q8N7U9 141 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 AMELXQ99217 191 aa5.28□□□□□ -1.56
TPM3-201ENST00000271850 ZNF861PO60384 105 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 IFI27P40305 119 aaPredicted RBP5.27□□□□□ -1.57
TPM3-201ENST00000271850 PRR4Q16378 134 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 ORMDL3Q8N138 153 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 LINC01561Q8N1V8 128 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 TMEM141Q96I45 108 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 PRELID3AQ96N28 172 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 C22orf24Q9Y442 160 aa5.27□□□□□ -1.57
TPM3-201ENST00000271850 LOC389332A0A1B0GUA5 103 aa5.26□□□□□ -1.57
TPM3-201ENST00000271850 IGIPA6NJ69 53 aa5.26□□□□□ -1.57
TPM3-201ENST00000271850 PPBPP02775 128 aa5.26□□□□□ -1.57
TPM3-201ENST00000271850 FAM19A3Q7Z5A8 133 aa5.26□□□□□ -1.57
TPM3-201ENST00000271850 XAGE1AQ9HD64 81 aa5.26□□□□□ -1.57
TPM3-201ENST00000271850 CARHSP1Q9Y2V2 147 aaKnown RBP5.26□□□□□ -1.57
TPM3-201ENST00000271850 F8W036 122 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 C2orf66Q6UXQ4 117 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 TEX43Q6ZNM6 134 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 ATP5L2Q7Z4Y8 100 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 CTDSP1Q9GZU7 261 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 ANAPC11Q9NYG5 84 aa5.25□□□□□ -1.57
TPM3-201ENST00000271850 TSPAN13O95857 204 aa5.24□□□□□ -1.57
TPM3-201ENST00000271850 S100A8P05109 93 aa5.24□□□□□ -1.57
TPM3-201ENST00000271850 RPL13AP40429 203 aaKnown RBP5.24□□□□□ -1.57
TPM3-201ENST00000271850 KRTAP13-1Q8IUC0 172 aa5.24□□□□□ -1.57
TPM3-201ENST00000271850 Q8IZM0 81 aa5.24□□□□□ -1.57
TPM3-201ENST00000271850 PACRGQ96M98 296 aaPredicted RBP5.24□□□□□ -1.57
TPM3-201ENST00000271850 CDKN2A-AS1Q9UH64 79 aa5.24□□□□□ -1.57
TPM3-201ENST00000271850 NUPR1O60356 82 aa5.23□□□□□ -1.57
TPM3-201ENST00000271850 RAB5AP20339 215 aa5.23□□□□□ -1.57
TPM3-201ENST00000271850 PEA15Q15121 130 aa5.23□□□□□ -1.57
TPM3-201ENST00000271850 Q8N8P6 123 aa5.23□□□□□ -1.57
TPM3-201ENST00000271850 TOMM7Q9P0U1 55 aa5.23□□□□□ -1.57
TPM3-201ENST00000271850 Q6ZN92 141 aa5.22□□□□□ -1.57
TPM3-201ENST00000271850 MAP1LC3AQ9H492 121 aa5.22□□□□□ -1.57
TPM3-201ENST00000271850 CYSLTR1Q9Y271 337 aa5.22□□□□□ -1.57
TPM3-201ENST00000271850 LAMTOR2Q9Y2Q5 125 aa5.22□□□□□ -1.57
TPM3-201ENST00000271850 SMIM1B2RUZ4 78 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 BCE1O60756 84 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 MRPL55Q7Z7F7 128 aaKnown RBP5.21□□□□□ -1.58
TPM3-201ENST00000271850 LINC00167Q96N53 147 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 C2orf88Q9BSF0 95 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 ALKBH7Q9BT30 221 aaPredicted RBP5.21□□□□□ -1.58
TPM3-201ENST00000271850 VCX2Q9H322 139 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 TP73-AS1Q9UF72 201 aa5.21□□□□□ -1.58
TPM3-201ENST00000271850 RPL37AP8A6NKH3 93 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 F8VRH5 84 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 SCO1O75880 301 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 PRSS2P07478 247 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 NPSP0C0P6 89 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 ADCYAP1P18509 176 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 CKS1BP61024 79 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 C6orf226Q5I0X4 101 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 RETNLBQ9BQ08 111 aa5.2□□□□□ -1.58
TPM3-201ENST00000271850 IGLV5-45A0A087WSX0 123 aa5.19□□□□□ -1.58
TPM3-201ENST00000271850 ORMDL2Q53FV1 153 aa5.19□□□□□ -1.58
TPM3-201ENST00000271850 TOMM6Q96B49 74 aa5.19□□□□□ -1.58
TPM3-201ENST00000271850 TIMM17AQ99595 171 aa5.19□□□□□ -1.58
TPM3-201ENST00000271850 IGLV5-37A0A075B6J1 123 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 GAGE10A6NGK3 116 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 CRYGAP11844 174 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 HERVK_113P63121 156 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 KIAA1644Q3SXP7 199 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
TPM3-201ENST00000271850 Q8NDZ9 215 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 TYMSOSQ8TAI1 123 aa5.18□□□□□ -1.58
TPM3-201ENST00000271850 RPL28P46779 137 aaKnown RBP5.17□□□□□ -1.58
TPM3-201ENST00000271850 TINCRA0A1B0GVN0 87 aa5.16□□□□□ -1.58
TPM3-201ENST00000271850 LINC01546A6NGU7 62 aa5.16□□□□□ -1.58
TPM3-201ENST00000271850 K7EMI3 77 aa5.16□□□□□ -1.58
TPM3-201ENST00000271850 CXCL5P42830 114 aa5.16□□□□□ -1.58
TPM3-201ENST00000271850 PNRC1Q12796 327 aaPredicted RBP5.16□□□□□ -1.58
TPM3-201ENST00000271850 COX7B2Q8TF08 81 aa5.16□□□□□ -1.58
TPM3-201ENST00000271850 NXT2Q9NPJ8 142 aaKnown RBP5.16□□□□□ -1.58
TPM3-201ENST00000271850 SPINK8P0C7L1 97 aa5.15□□□□□ -1.59
TPM3-201ENST00000271850 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
TPM3-201ENST00000271850 PDZD11Q5EBL8 140 aa5.15□□□□□ -1.59
TPM3-201ENST00000271850 ERASQ7Z444 233 aa5.15□□□□□ -1.59
TPM3-201ENST00000271850 GEMIN7Q9H840 131 aaKnown RBP5.15□□□□□ -1.59
TPM3-201ENST00000271850 IGKV2-28A0A075B6P5 120 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 IGKV2D-28P01615 120 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 MT-ND4LP03901 98 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 VPREB1P12018 145 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 RAB5BP61020 215 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 SEC11AP67812 179 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 PRLHP81277 87 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 CST9LQ9H4G1 147 aa5.14□□□□□ -1.59
TPM3-201ENST00000271850 A0A096LNJ9 63 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
TPM3-201ENST00000271850 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms