RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TRBV30A0A0K0K1B3 111 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 K7EMI3 77 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 IGLV7-43P04211 117 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 ORMDL2Q53FV1 153 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 ZC2HC1BQ5TFG8 222 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 LINC00173Q6ZV60 143 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 C2orf88Q9BSF0 95 aa5.93□□□□□ -1.46
VPS41-201ENST00000265745 NDUFC2-KCTD14E9PQ53 114 aa5.92□□□□□ -1.46
VPS41-201ENST00000265745 Q6ZN92 141 aa5.92□□□□□ -1.46
VPS41-201ENST00000265745 NXT2Q9NPJ8 142 aaKnown RBP5.92□□□□□ -1.46
VPS41-201ENST00000265745 C9orf129Q5T035 196 aaKnown RBP5.91□□□□□ -1.46
VPS41-201ENST00000265745 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
VPS41-201ENST00000265745 FAM19A3Q7Z5A8 133 aa5.91□□□□□ -1.46
VPS41-201ENST00000265745 PACRGQ96M98 296 aaPredicted RBP5.91□□□□□ -1.46
VPS41-201ENST00000265745 CLLU1Q5K131 121 aa5.9□□□□□ -1.46
VPS41-201ENST00000265745 DIRC1Q969H9 104 aa5.9□□□□□ -1.46
VPS41-201ENST00000265745 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 PRSS2P07478 247 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 G0S2P27469 103 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 CKS1BP61024 79 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 HERVK_113P63121 156 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 KIAA1644Q3SXP7 199 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 PAPPA-AS1Q5QFB9 102 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 TOMM6Q96B49 74 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 TIMM17AQ99595 171 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
VPS41-201ENST00000265745 TMEM218A2RU14 115 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 H0Y9J4 135 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 M0QXV9 152 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 ADCYAP1P18509 176 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 SEC11AP67812 179 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 Q8IZM0 81 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 PRR26Q8N8Z3 221 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 ALKBH7Q9BT30 221 aaPredicted RBP5.88□□□□□ -1.47
VPS41-201ENST00000265745 TOMM7Q9P0U1 55 aa5.88□□□□□ -1.47
VPS41-201ENST00000265745 TRAV9-1A0A075B6T8 112 aa5.87□□□□□ -1.47
VPS41-201ENST00000265745 UBE2BP63146 152 aa5.87□□□□□ -1.47
VPS41-201ENST00000265745 UQCC3Q6UW78 93 aa5.87□□□□□ -1.47
VPS41-201ENST00000265745 ERASQ7Z444 233 aa5.87□□□□□ -1.47
VPS41-201ENST00000265745 GEMIN7Q9H840 131 aaKnown RBP5.87□□□□□ -1.47
VPS41-201ENST00000265745 LINC01546A6NGU7 62 aa5.86□□□□□ -1.47
VPS41-201ENST00000265745 KRTAP1-4P0C5Y4 121 aa5.86□□□□□ -1.47
VPS41-201ENST00000265745 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
VPS41-201ENST00000265745 SCGB3A1Q96QR1 104 aa5.86□□□□□ -1.47
VPS41-201ENST00000265745 F8VRH5 84 aa5.85□□□□□ -1.47
VPS41-201ENST00000265745 IFITM2Q01629 132 aa5.85□□□□□ -1.47
VPS41-201ENST00000265745 GNB1LQ9BYB4 327 aa5.85□□□□□ -1.47
VPS41-201ENST00000265745 XAGE1AQ9HD64 81 aa5.85□□□□□ -1.47
VPS41-201ENST00000265745 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
VPS41-201ENST00000265745 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
VPS41-201ENST00000265745 TINCRA0A1B0GVN0 87 aa5.84□□□□□ -1.47
VPS41-201ENST00000265745 SMIM1B2RUZ4 78 aa5.84□□□□□ -1.47
VPS41-201ENST00000265745 SEC11CQ9BY50 192 aa5.84□□□□□ -1.47
VPS41-201ENST00000265745 CST9LQ9H4G1 147 aa5.84□□□□□ -1.47
VPS41-201ENST00000265745 IGLV5-45A0A087WSX0 123 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 LINC01549A6NIU2 74 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 ZNF861PO60384 105 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 S100PP25815 95 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 CXCL5P42830 114 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 LBHQ53QV2 105 aaPredicted RBP5.83□□□□□ -1.48
VPS41-201ENST00000265745 PDZD11Q5EBL8 140 aa5.83□□□□□ -1.48
VPS41-201ENST00000265745 TP73-AS1Q9UF72 201 aa5.82□□□□□ -1.48
VPS41-201ENST00000265745 NUPR1O60356 82 aa5.81□□□□□ -1.48
VPS41-201ENST00000265745 PMVKQ15126 192 aa5.81□□□□□ -1.48
VPS41-201ENST00000265745 COX19Q49B96 90 aa5.81□□□□□ -1.48
VPS41-201ENST00000265745 C10orf91Q5T1B1 145 aa5.81□□□□□ -1.48
VPS41-201ENST00000265745 MRPL55Q7Z7F7 128 aaKnown RBP5.81□□□□□ -1.48
VPS41-201ENST00000265745 COX7B2Q8TF08 81 aa5.81□□□□□ -1.48
VPS41-201ENST00000265745 CARHSP1Q9Y2V2 147 aaKnown RBP5.81□□□□□ -1.48
VPS41-201ENST00000265745 RPL13AP40429 203 aaKnown RBP5.8□□□□□ -1.48
VPS41-201ENST00000265745 FABP9Q0Z7S8 132 aa5.8□□□□□ -1.48
VPS41-201ENST00000265745 PET117Q6UWS5 81 aa5.8□□□□□ -1.48
VPS41-201ENST00000265745 FA2HQ7L5A8 372 aa5.8□□□□□ -1.48
VPS41-201ENST00000265745 BCE1O60756 84 aa5.79□□□□□ -1.48
VPS41-201ENST00000265745 SPINK8P0C7L1 97 aa5.79□□□□□ -1.48
VPS41-201ENST00000265745 COMMD7Q86VX2 200 aa5.79□□□□□ -1.48
VPS41-201ENST00000265745 LINC00167Q96N53 147 aa5.79□□□□□ -1.48
VPS41-201ENST00000265745 A0A096LNJ9 63 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 RAB5BP61020 215 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 RHEBQ15382 184 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 RPS10P5Q9NQ39 176 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 SMCO4Q9NRQ5 59 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 LPAP08519 4548 aa5.78□□□□□ -1.48
VPS41-201ENST00000265745 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
VPS41-201ENST00000265745 IGLV5-39A0A0G2JS06 123 aa5.77□□□□□ -1.49
VPS41-201ENST00000265745 H3BRM9 83 aa5.77□□□□□ -1.49
VPS41-201ENST00000265745 IGLC3P0DOY3 106 aa5.77□□□□□ -1.49
VPS41-201ENST00000265745 RPL28P46779 137 aaKnown RBP5.77□□□□□ -1.49
VPS41-201ENST00000265745 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
VPS41-201ENST00000265745 ATP5LO75964 103 aa5.76□□□□□ -1.49
VPS41-201ENST00000265745 LINC00614P0C842 121 aa5.76□□□□□ -1.49
VPS41-201ENST00000265745 VPREB1P12018 145 aa5.76□□□□□ -1.49
VPS41-201ENST00000265745 NDUFA6P56556 154 aa5.75□□□□□ -1.49
VPS41-201ENST00000265745 C18orf32Q8TCD1 76 aa5.75□□□□□ -1.49
VPS41-201ENST00000265745 TRAPPC1Q9Y5R8 145 aa5.75□□□□□ -1.49
VPS41-201ENST00000265745 A0A087X002 238 aa5.74□□□□□ -1.49
VPS41-201ENST00000265745 CRYGAP11844 174 aa5.74□□□□□ -1.49
VPS41-201ENST00000265745 ZNF22P17026 224 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms