RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 SMIM9A6NGZ8 99 aa14.11□□□□□ -0.15
CSPG5-201ENST00000264723 NF1P21359 2839 aa14.11□□□□□ -0.15
CSPG5-201ENST00000264723 LYRM9A8MSI8 78 aa14.11□□□□□ -0.15
CSPG5-201ENST00000264723 PRR3P79522 188 aaKnown RBP14.1□□□□□ -0.15
CSPG5-201ENST00000264723 FBN2P35556 2912 aa14.1□□□□□ -0.15
CSPG5-201ENST00000264723 HAMPP81172 84 aa14.1□□□□□ -0.15
CSPG5-201ENST00000264723 IGHV4-30-4P0DP06 118 aa14.09□□□□□ -0.15
CSPG5-201ENST00000264723 SDIM1Q6ZPB5 146 aa14.09□□□□□ -0.15
CSPG5-201ENST00000264723 RETNQ9HD89 108 aa14.08□□□□□ -0.16
CSPG5-201ENST00000264723 ORMDL1Q9P0S3 153 aa14.08□□□□□ -0.16
CSPG5-201ENST00000264723 BEAN1Q3B7T3 259 aa14.07□□□□□ -0.16
CSPG5-201ENST00000264723 NOTCH1P46531 2555 aa14.07□□□□□ -0.16
CSPG5-201ENST00000264723 C11orf45Q8TAV5 145 aa14.07□□□□□ -0.16
CSPG5-201ENST00000264723 SMIM11BQ8TCY0 68 aa14.07□□□□□ -0.16
CSPG5-201ENST00000264723 XAGE1AQ9HD64 81 aa14.07□□□□□ -0.16
CSPG5-201ENST00000264723 TIMM17BO60830 172 aa14.06□□□□□ -0.16
CSPG5-201ENST00000264723 ITPR2Q14571 2701 aa14.06□□□□□ -0.16
CSPG5-201ENST00000264723 A0A096LNT2 108 aa14.06□□□□□ -0.16
CSPG5-201ENST00000264723 FSHBP01225 129 aa14.06□□□□□ -0.16
CSPG5-201ENST00000264723 CCL18P55774 89 aa14.06□□□□□ -0.16
CSPG5-201ENST00000264723 RPL18AQ02543 176 aaKnown RBP14.05□□□□□ -0.16
CSPG5-201ENST00000264723 H0YGX0 51 aa14.05□□□□□ -0.16
CSPG5-201ENST00000264723 MIFP14174 115 aa14.05□□□□□ -0.16
CSPG5-201ENST00000264723 SOSTDC1Q6X4U4 206 aa14.05□□□□□ -0.16
CSPG5-201ENST00000264723 DEFB105AQ8NG35 78 aa14.05□□□□□ -0.16
CSPG5-201ENST00000264723 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
CSPG5-201ENST00000264723 LINC00959A0A1B0GUT2 108 aa14.04□□□□□ -0.16
CSPG5-201ENST00000264723 DEFB131BA0A096LNP1 70 aa14.04□□□□□ -0.16
CSPG5-201ENST00000264723 GHRHP01286 108 aa14.04□□□□□ -0.16
CSPG5-201ENST00000264723 ACYP1P07311 99 aa14.03□□□□□ -0.16
CSPG5-201ENST00000264723 C9orf116Q5BN46 136 aaPredicted RBP14.03□□□□□ -0.16
CSPG5-201ENST00000264723 C16orf95Q9H693 158 aa14.03□□□□□ -0.16
CSPG5-201ENST00000264723 SETXQ7Z333 2677 aaKnown RBP14.03□□□□□ -0.16
CSPG5-201ENST00000264723 FHL2Q14192 279 aa14.03□□□□□ -0.16
CSPG5-201ENST00000264723 LITAFQ99732 161 aa14.02□□□□□ -0.17
CSPG5-201ENST00000264723 COL6A5A8TX70 2615 aa14.01□□□□□ -0.17
CSPG5-201ENST00000264723 A0A1B0GX51 115 aa14□□□□□ -0.17
CSPG5-201ENST00000264723 LINC00643Q86TS7 51 aa14□□□□□ -0.17
CSPG5-201ENST00000264723 A0A087WYN8 130 aa13.99□□□□□ -0.17
CSPG5-201ENST00000264723 TRACP01848 142 aa13.99□□□□□ -0.17
CSPG5-201ENST00000264723 KPRPQ5T749 579 aaPredicted RBP13.98□□□□□ -0.17
CSPG5-201ENST00000264723 LINC00337Q8N6G1 96 aa13.98□□□□□ -0.17
CSPG5-201ENST00000264723 UBL5Q9BZL1 73 aa13.98□□□□□ -0.17
CSPG5-201ENST00000264723 CELSR2Q9HCU4 2923 aa13.98□□□□□ -0.17
CSPG5-201ENST00000264723 IBA57-AS1B1ANH7 110 aa13.97□□□□□ -0.17
CSPG5-201ENST00000264723 TMEM126AQ9H061 195 aa13.96□□□□□ -0.17
CSPG5-201ENST00000264723 C6orf99Q4VX62 202 aa13.95□□□□□ -0.18
CSPG5-201ENST00000264723 KIR2DL5BQ8NHK3 375 aa13.95□□□□□ -0.18
CSPG5-201ENST00000264723 NBEAL1Q6ZS30 2694 aa13.95□□□□□ -0.18
CSPG5-201ENST00000264723 FAM218AQ96MZ4 157 aa13.95□□□□□ -0.18
CSPG5-201ENST00000264723 NANOS2P60321 138 aaKnown RBP13.94□□□□□ -0.18
CSPG5-201ENST00000264723 CXCL5P42830 114 aa13.94□□□□□ -0.18
CSPG5-201ENST00000264723 SHISA2Q6UWI4 295 aa13.94□□□□□ -0.18
CSPG5-201ENST00000264723 IGLV5-39A0A0G2JS06 123 aa13.94□□□□□ -0.18
CSPG5-201ENST00000264723 SBSPONQ8IVN8 264 aa13.93□□□□□ -0.18
CSPG5-201ENST00000264723 DSCR8Q96T75 97 aa13.93□□□□□ -0.18
CSPG5-201ENST00000264723 WFDC9Q8NEX5 89 aa13.92□□□□□ -0.18
CSPG5-201ENST00000264723 CD164L2Q6UWJ8 174 aa13.92□□□□□ -0.18
CSPG5-201ENST00000264723 RMI2Q96E14 147 aa13.92□□□□□ -0.18
CSPG5-201ENST00000264723 A8MTW9 85 aa13.91□□□□□ -0.18
CSPG5-201ENST00000264723 TRAV23DV6A0A075B6W5 121 aa13.9□□□□□ -0.18
CSPG5-201ENST00000264723 A0A0J9YWU9 116 aa13.9□□□□□ -0.18
CSPG5-201ENST00000264723 CSDC2Q9Y534 153 aaKnown RBP13.9□□□□□ -0.18
CSPG5-201ENST00000264723 A0A087WVE0 104 aa13.9□□□□□ -0.18
CSPG5-201ENST00000264723 Q8N3U1 123 aa13.89□□□□□ -0.19
CSPG5-201ENST00000264723 Q6ZTC4 211 aa13.89□□□□□ -0.19
CSPG5-201ENST00000264723 MXRA5Q9NR99 2828 aa13.89□□□□□ -0.19
CSPG5-201ENST00000264723 UNQ6190/PRO20217Q6UXQ8 127 aa13.88□□□□□ -0.19
CSPG5-201ENST00000264723 IGKV2-24A0A0C4DH68 120 aa13.88□□□□□ -0.19
CSPG5-201ENST00000264723 A0A087WZ39 114 aa13.88□□□□□ -0.19
CSPG5-201ENST00000264723 LELP1Q5T871 98 aa13.87□□□□□ -0.19
CSPG5-201ENST00000264723 UBE2BP63146 152 aa13.87□□□□□ -0.19
CSPG5-201ENST00000264723 CITED1Q99966 193 aa13.87□□□□□ -0.19
CSPG5-201ENST00000264723 F8WEM9 126 aa13.86□□□□□ -0.19
CSPG5-201ENST00000264723 CELA1Q9UNI1 258 aa13.86□□□□□ -0.19
CSPG5-201ENST00000264723 IGLV5-45A0A087WSX0 123 aa13.85□□□□□ -0.19
CSPG5-201ENST00000264723 IGHV3OR16-9A0A0B4J2B5 98 aa13.85□□□□□ -0.19
CSPG5-201ENST00000264723 C6orf223Q8N319 242 aa13.85□□□□□ -0.19
CSPG5-201ENST00000264723 RPL28P46779 137 aaKnown RBP13.85□□□□□ -0.19
CSPG5-201ENST00000264723 ETDCA0A1B0GVM5 59 aa13.85□□□□□ -0.19
CSPG5-201ENST00000264723 hADV29S1A0JD25 119 aa13.84□□□□□ -0.19
CSPG5-201ENST00000264723 SCXQ7RTU7 201 aa13.84□□□□□ -0.19
CSPG5-201ENST00000264723 KRTAP1-3Q8IUG1 177 aa13.84□□□□□ -0.19
CSPG5-201ENST00000264723 DIRC1Q969H9 104 aa13.84□□□□□ -0.19
CSPG5-201ENST00000264723 FAM104AQ969W3 186 aa13.84□□□□□ -0.19
CSPG5-201ENST00000264723 CYSRT1A8MQ03 144 aa13.83□□□□□ -0.2
CSPG5-201ENST00000264723 RBM3P98179 157 aaKnown RBP13.82□□□□□ -0.2
CSPG5-201ENST00000264723 TMEM256-PLSCR3K7ERE1 68 aa13.82□□□□□ -0.2
CSPG5-201ENST00000264723 ENHOQ6UWT2 76 aa13.82□□□□□ -0.2
CSPG5-201ENST00000264723 ATOX1O00244 68 aa13.81□□□□□ -0.2
CSPG5-201ENST00000264723 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
CSPG5-201ENST00000264723 JMJD7-PLA2G4BH0Y9G9 81 aa13.8□□□□□ -0.2
CSPG5-201ENST00000264723 FAM240AA0A1B0GVK7 77 aa13.79□□□□□ -0.2
CSPG5-201ENST00000264723 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.79□□□□□ -0.2
CSPG5-201ENST00000264723 Q6ZQY7 126 aa13.79□□□□□ -0.2
CSPG5-201ENST00000264723 LINC00846Q9NV44 126 aa13.77□□□□□ -0.2
CSPG5-201ENST00000264723 IGKV2-28A0A075B6P5 120 aa13.77□□□□□ -0.21
CSPG5-201ENST00000264723 IGKV2D-28P01615 120 aa13.77□□□□□ -0.21
CSPG5-201ENST00000264723 Q8IZM0 81 aa13.77□□□□□ -0.21
CSPG5-201ENST00000264723 GIG44P09565 113 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms