RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 Q8IZM0 81 aa10.69□□□□□ -0.7
VPS26A-201ENST00000263559 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
VPS26A-201ENST00000263559 MALP21145 153 aa10.69□□□□□ -0.7
VPS26A-201ENST00000263559 GTF2H5Q6ZYL4 71 aa10.69□□□□□ -0.7
VPS26A-201ENST00000263559 COL7A1Q02388 2944 aa10.69□□□□□ -0.7
VPS26A-201ENST00000263559 CRPP02741 224 aa10.68□□□□□ -0.7
VPS26A-201ENST00000263559 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
VPS26A-201ENST00000263559 B9D2Q9BPU9 175 aa10.68□□□□□ -0.7
VPS26A-201ENST00000263559 SOSTDC1Q6X4U4 206 aa10.67□□□□□ -0.7
VPS26A-201ENST00000263559 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
VPS26A-201ENST00000263559 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
VPS26A-201ENST00000263559 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
VPS26A-201ENST00000263559 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
VPS26A-201ENST00000263559 IBA57-AS1B1ANH7 110 aa10.65□□□□□ -0.7
VPS26A-201ENST00000263559 LINC00158P58513 81 aa10.65□□□□□ -0.7
VPS26A-201ENST00000263559 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.7
VPS26A-201ENST00000263559 MIR7-3HGQ8N6C7 128 aa10.65□□□□□ -0.7
VPS26A-201ENST00000263559 H7C2G1 150 aa10.64□□□□□ -0.71
VPS26A-201ENST00000263559 PFN2P35080 140 aa10.64□□□□□ -0.71
VPS26A-201ENST00000263559 CKS1BP61024 79 aa10.64□□□□□ -0.71
VPS26A-201ENST00000263559 LINC00588Q9Y4M8 146 aa10.64□□□□□ -0.71
VPS26A-201ENST00000263559 CFAP161Q6P656 301 aa10.63□□□□□ -0.71
VPS26A-201ENST00000263559 ERG28Q9UKR5 140 aa10.63□□□□□ -0.71
VPS26A-201ENST00000263559 LOC107984156A0A0G2JMH3 177 aa10.63□□□□□ -0.71
VPS26A-201ENST00000263559 ARL17AQ8IVW1 177 aa10.63□□□□□ -0.71
VPS26A-201ENST00000263559 COPS9Q8WXC6 57 aa10.63□□□□□ -0.71
VPS26A-201ENST00000263559 KLK5Q9Y337 293 aaPredicted RBP10.63□□□□□ -0.71
VPS26A-201ENST00000263559 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
VPS26A-201ENST00000263559 KRTAP26-1Q6PEX3 210 aa10.61□□□□□ -0.71
VPS26A-201ENST00000263559 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
VPS26A-201ENST00000263559 CXCL5P42830 114 aa10.61□□□□□ -0.71
VPS26A-201ENST00000263559 CCL18P55774 89 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 SPAG11BQ08648 103 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 Q1RN00 199 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 PPDPFQ9H3Y8 114 aa10.6□□□□□ -0.71
VPS26A-201ENST00000263559 DNHD1Q96M86 4753 aa10.59□□□□□ -0.71
VPS26A-201ENST00000263559 H3BMG7 143 aa10.59□□□□□ -0.71
VPS26A-201ENST00000263559 PSMB2P49721 201 aa10.58□□□□□ -0.72
VPS26A-201ENST00000263559 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
VPS26A-201ENST00000263559 RPL13AP40429 203 aaKnown RBP10.57□□□□□ -0.72
VPS26A-201ENST00000263559 C9orf116Q5BN46 136 aaPredicted RBP10.57□□□□□ -0.72
VPS26A-201ENST00000263559 C10orf25Q5T742 122 aa10.57□□□□□ -0.72
VPS26A-201ENST00000263559 UNQ6190/PRO20217Q6UXQ8 127 aa10.57□□□□□ -0.72
VPS26A-201ENST00000263559 C1orf43Q9BWL3 253 aa10.56□□□□□ -0.72
VPS26A-201ENST00000263559 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
VPS26A-201ENST00000263559 LYRM7Q5U5X0 104 aa10.56□□□□□ -0.72
VPS26A-201ENST00000263559 IGKV2D-24A0A075B6R9 120 aa10.55□□□□□ -0.72
VPS26A-201ENST00000263559 TCL1BO95988 128 aa10.55□□□□□ -0.72
VPS26A-201ENST00000263559 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
VPS26A-201ENST00000263559 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
VPS26A-201ENST00000263559 TRIAP1O43715 76 aa10.54□□□□□ -0.72
VPS26A-201ENST00000263559 COX17Q14061 63 aa10.54□□□□□ -0.72
VPS26A-201ENST00000263559 Q9HAA7 133 aa10.54□□□□□ -0.72
VPS26A-201ENST00000263559 NTN5Q8WTR8 489 aaPredicted RBP10.53□□□□□ -0.72
VPS26A-201ENST00000263559 UPK3BQ9BT76 320 aa10.53□□□□□ -0.72
VPS26A-201ENST00000263559 IGKV2-28A0A075B6P5 120 aa10.52□□□□□ -0.72
VPS26A-201ENST00000263559 IGKV2D-28P01615 120 aa10.52□□□□□ -0.72
VPS26A-201ENST00000263559 HIGD2BQ4VC39 106 aa10.52□□□□□ -0.72
VPS26A-201ENST00000263559 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.73
VPS26A-201ENST00000263559 MTURNQ8N3F0 131 aa10.51□□□□□ -0.73
VPS26A-201ENST00000263559 C15orf56Q8N910 161 aa10.51□□□□□ -0.73
VPS26A-201ENST00000263559 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
VPS26A-201ENST00000263559 LINC00337Q8N6G1 96 aa10.51□□□□□ -0.73
VPS26A-201ENST00000263559 APLNQ9ULZ1 77 aa10.51□□□□□ -0.73
VPS26A-201ENST00000263559 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
VPS26A-201ENST00000263559 F8W1H4 67 aa10.5□□□□□ -0.73
VPS26A-201ENST00000263559 DYNC2H1Q8NCM8 4307 aaKnown RBP10.5□□□□□ -0.73
VPS26A-201ENST00000263559 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
VPS26A-201ENST00000263559 TRAV13-2A0A0B4J235 113 aa10.49□□□□□ -0.73
VPS26A-201ENST00000263559 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
VPS26A-201ENST00000263559 WFDC2Q14508 124 aa10.49□□□□□ -0.73
VPS26A-201ENST00000263559 DNAH1Q9P2D7 4330 aa10.48□□□□□ -0.73
VPS26A-201ENST00000263559 GVQW2A0A096LPI5 108 aaPredicted RBP10.48□□□□□ -0.73
VPS26A-201ENST00000263559 COX6CP09669 75 aa10.48□□□□□ -0.73
VPS26A-201ENST00000263559 CAMK2N2Q96S95 79 aa10.48□□□□□ -0.73
VPS26A-201ENST00000263559 CSMD3Q7Z407 3707 aa10.46□□□□□ -0.73
VPS26A-201ENST00000263559 MEGF8Q7Z7M0 2845 aa10.46□□□□□ -0.73
VPS26A-201ENST00000263559 LYSTQ99698 3801 aa10.46□□□□□ -0.74
VPS26A-201ENST00000263559 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
VPS26A-201ENST00000263559 CLEC2BQ92478 149 aa10.45□□□□□ -0.74
VPS26A-201ENST00000263559 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
VPS26A-201ENST00000263559 ATXN8Q156A1 80 aa10.45□□□□□ -0.74
VPS26A-201ENST00000263559 Q6ZRU5 148 aa10.45□□□□□ -0.74
VPS26A-201ENST00000263559 C2orf48Q96LS8 159 aa10.45□□□□□ -0.74
VPS26A-201ENST00000263559 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
VPS26A-201ENST00000263559 KRTAP21-3Q3LHN1 58 aa10.44□□□□□ -0.74
VPS26A-201ENST00000263559 UBE2DNLQ8IWF7 75 aa10.44□□□□□ -0.74
VPS26A-201ENST00000263559 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
VPS26A-201ENST00000263559 NDUFC2O95298 119 aa10.43□□□□□ -0.74
VPS26A-201ENST00000263559 Q8NDZ9 215 aa10.43□□□□□ -0.74
VPS26A-201ENST00000263559 NUPR2A6NF83 97 aa10.43□□□□□ -0.74
VPS26A-201ENST00000263559 OR13C6PQ8NH95 151 aa10.43□□□□□ -0.74
VPS26A-201ENST00000263559 RMI2Q96E14 147 aa10.42□□□□□ -0.74
VPS26A-201ENST00000263559 RPL28P46779 137 aaKnown RBP10.42□□□□□ -0.74
VPS26A-201ENST00000263559 OCIAD2Q56VL3 154 aa10.42□□□□□ -0.74
VPS26A-201ENST00000263559 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
VPS26A-201ENST00000263559 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
VPS26A-201ENST00000263559 SMIM11BQ8TCY0 68 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms