RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
ZNF541-201ENST00000263351 C16orf74Q96GX8 76 aa11.5□□□□□ -0.57
ZNF541-201ENST00000263351 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
ZNF541-201ENST00000263351 TRAV25A0A0B4J276 109 aa11.49□□□□□ -0.57
ZNF541-201ENST00000263351 IGKV3D-7A0A0C4DH55 119 aa11.49□□□□□ -0.57
ZNF541-201ENST00000263351 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
ZNF541-201ENST00000263351 IGLV10-54A0A075B6I4 117 aa11.49□□□□□ -0.57
ZNF541-201ENST00000263351 TRBV6-4A0A1B0GX49 114 aa11.48□□□□□ -0.57
ZNF541-201ENST00000263351 C9orf116Q5BN46 136 aaPredicted RBP11.48□□□□□ -0.57
ZNF541-201ENST00000263351 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
ZNF541-201ENST00000263351 LINC00959A0A1B0GUT2 108 aa11.48□□□□□ -0.57
ZNF541-201ENST00000263351 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
ZNF541-201ENST00000263351 A0A087WVE0 104 aa11.47□□□□□ -0.57
ZNF541-201ENST00000263351 MRPL23Q16540 153 aaKnown RBP11.47□□□□□ -0.57
ZNF541-201ENST00000263351 PKD1L1Q8TDX9 2849 aa11.47□□□□□ -0.57
ZNF541-201ENST00000263351 GYPEP15421 78 aa11.47□□□□□ -0.57
ZNF541-201ENST00000263351 UNC79Q9P2D8 2635 aa11.46□□□□□ -0.57
ZNF541-201ENST00000263351 DNAL4O96015 105 aa11.46□□□□□ -0.58
ZNF541-201ENST00000263351 IGLV1-51P01701 117 aa11.46□□□□□ -0.58
ZNF541-201ENST00000263351 C6orf226Q5I0X4 101 aa11.46□□□□□ -0.58
ZNF541-201ENST00000263351 LINC00526Q96FQ7 95 aa11.46□□□□□ -0.58
ZNF541-201ENST00000263351 SMR3AQ99954 134 aa11.46□□□□□ -0.58
ZNF541-201ENST00000263351 A0A087WZ39 114 aa11.45□□□□□ -0.58
ZNF541-201ENST00000263351 LINC00643Q86TS7 51 aa11.45□□□□□ -0.58
ZNF541-201ENST00000263351 LRRC75A-AS1Q8N1F1 130 aa11.45□□□□□ -0.58
ZNF541-201ENST00000263351 LINC00482Q8N8I6 264 aa11.45□□□□□ -0.58
ZNF541-201ENST00000263351 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
ZNF541-201ENST00000263351 HIVEP1P15822 2718 aa11.44□□□□□ -0.58
ZNF541-201ENST00000263351 Q8NDZ9 215 aa11.44□□□□□ -0.58
ZNF541-201ENST00000263351 COPS9Q8WXC6 57 aa11.44□□□□□ -0.58
ZNF541-201ENST00000263351 CYSTM1Q9H1C7 97 aa11.44□□□□□ -0.58
ZNF541-201ENST00000263351 ATRQ13535 2644 aa11.44□□□□□ -0.58
ZNF541-201ENST00000263351 OVOL2Q9BRP0 275 aa11.43□□□□□ -0.58
ZNF541-201ENST00000263351 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
ZNF541-201ENST00000263351 SS18Q15532 418 aa11.42□□□□□ -0.58
ZNF541-201ENST00000263351 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
ZNF541-201ENST00000263351 ACYP1P07311 99 aa11.41□□□□□ -0.58
ZNF541-201ENST00000263351 RNASE1P07998 156 aaKnown RBP11.41□□□□□ -0.58
ZNF541-201ENST00000263351 WFDC9Q8NEX5 89 aa11.41□□□□□ -0.58
ZNF541-201ENST00000263351 FAM222AQ5U5X8 452 aa11.4□□□□□ -0.58
ZNF541-201ENST00000263351 TEP1Q99973 2627 aaKnown RBP11.4□□□□□ -0.58
ZNF541-201ENST00000263351 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
ZNF541-201ENST00000263351 NANOS2P60321 138 aaKnown RBP11.4□□□□□ -0.58
ZNF541-201ENST00000263351 LINC00269Q8N2A0 174 aa11.39□□□□□ -0.59
ZNF541-201ENST00000263351 CXCL5P42830 114 aa11.39□□□□□ -0.59
ZNF541-201ENST00000263351 C9orf153Q5TBE3 101 aa11.39□□□□□ -0.59
ZNF541-201ENST00000263351 TMEM86BQ8N661 226 aa11.38□□□□□ -0.59
ZNF541-201ENST00000263351 PF4P02776 101 aa11.38□□□□□ -0.59
ZNF541-201ENST00000263351 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
ZNF541-201ENST00000263351 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
ZNF541-201ENST00000263351 X6R8D5 127 aa11.35□□□□□ -0.59
ZNF541-201ENST00000263351 HILS1P60008 231 aa11.35□□□□□ -0.59
ZNF541-201ENST00000263351 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 DEFB135Q30KP9 77 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 C10orf25Q5T742 122 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 IMUPQ9GZP8 106 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 PPDPFQ9H3Y8 114 aa11.34□□□□□ -0.59
ZNF541-201ENST00000263351 C2orf48Q96LS8 159 aa11.33□□□□□ -0.6
ZNF541-201ENST00000263351 hADV29S1A0JD25 119 aa11.32□□□□□ -0.6
ZNF541-201ENST00000263351 ANGP03950 147 aaKnown RBP11.32□□□□□ -0.6
ZNF541-201ENST00000263351 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
ZNF541-201ENST00000263351 H0YGX0 51 aa11.31□□□□□ -0.6
ZNF541-201ENST00000263351 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
ZNF541-201ENST00000263351 HTN3P15516 51 aa11.31□□□□□ -0.6
ZNF541-201ENST00000263351 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
ZNF541-201ENST00000263351 OBSCN-AS1Q96MR7 158 aa11.31□□□□□ -0.6
ZNF541-201ENST00000263351 LY6G6DO95868 133 aa11.3□□□□□ -0.6
ZNF541-201ENST00000263351 ORMDL1Q9P0S3 153 aa11.3□□□□□ -0.6
ZNF541-201ENST00000263351 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
ZNF541-201ENST00000263351 M0R2N4 97 aa11.29□□□□□ -0.6
ZNF541-201ENST00000263351 HIST1H4AP62805 103 aaKnown RBP11.29□□□□□ -0.6
ZNF541-201ENST00000263351 C6orf99Q4VX62 202 aa11.29□□□□□ -0.6
ZNF541-201ENST00000263351 Q8IZM0 81 aa11.29□□□□□ -0.6
ZNF541-201ENST00000263351 A0A1B0GX51 115 aa11.28□□□□□ -0.6
ZNF541-201ENST00000263351 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
ZNF541-201ENST00000263351 FAM110AQ9BQ89 295 aa11.28□□□□□ -0.6
ZNF541-201ENST00000263351 Q8N814 137 aa11.27□□□□□ -0.6
ZNF541-201ENST00000263351 PRO0255Q9UI72 69 aa11.27□□□□□ -0.6
ZNF541-201ENST00000263351 UQCRQO14949 82 aa11.27□□□□□ -0.61
ZNF541-201ENST00000263351 REG3AQ06141 175 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 NSD1Q96L73 2696 aaPredicted RBP11.26□□□□□ -0.61
ZNF541-201ENST00000263351 COX7CP15954 63 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 C16orf95Q9H693 158 aa11.26□□□□□ -0.61
ZNF541-201ENST00000263351 LINC00612Q8N6U2 182 aa11.25□□□□□ -0.61
ZNF541-201ENST00000263351 A0A1B0GUV1 79 aa11.24□□□□□ -0.61
ZNF541-201ENST00000263351 ANK2Q01484 3957 aa11.24□□□□□ -0.61
ZNF541-201ENST00000263351 CMC4P56277 68 aaPredicted RBP11.23□□□□□ -0.61
ZNF541-201ENST00000263351 TENM3Q9P273 2699 aa11.23□□□□□ -0.61
ZNF541-201ENST00000263351 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
ZNF541-201ENST00000263351 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 Q6JHZ5 121 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 CD164L2Q6UWJ8 174 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 XAGE1AQ9HD64 81 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 TRAV23DV6A0A075B6W5 121 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 USP17L23D6RBM5 183 aa11.22□□□□□ -0.61
ZNF541-201ENST00000263351 CCKP06307 115 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms