RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 IBA57-AS1B1ANH7 110 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 H0YGX0 51 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 FHL2Q14192 279 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 DEFB113Q30KQ7 82 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 PPDPFQ9H3Y8 114 aa12.19□□□□□ -0.46
TRAM1-201ENST00000262213 FLNAP21333 2647 aaKnown RBP12.19□□□□□ -0.46
TRAM1-201ENST00000262213 A0A087WZ39 114 aa12.18□□□□□ -0.46
TRAM1-201ENST00000262213 LINC00959A0A1B0GUT2 108 aa12.18□□□□□ -0.46
TRAM1-201ENST00000262213 LINC00526Q96FQ7 95 aa12.18□□□□□ -0.46
TRAM1-201ENST00000262213 GCN1Q92616 2671 aaKnown RBP12.17□□□□□ -0.46
TRAM1-201ENST00000262213 NBEAL2Q6ZNJ1 2754 aa12.17□□□□□ -0.46
TRAM1-201ENST00000262213 ESM1Q9NQ30 184 aa12.17□□□□□ -0.46
TRAM1-201ENST00000262213 COX7CP15954 63 aa12.16□□□□□ -0.46
TRAM1-201ENST00000262213 LOC107984640A0A0U1RRK4 108 aa12.15□□□□□ -0.46
TRAM1-201ENST00000262213 hADV29S1A0JD25 119 aa12.15□□□□□ -0.46
TRAM1-201ENST00000262213 A0A1B0GX51 115 aa12.14□□□□□ -0.47
TRAM1-201ENST00000262213 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
TRAM1-201ENST00000262213 C2orf48Q96LS8 159 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 APCP25054 2843 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 ATOX1O00244 68 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 GYPEP15421 78 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 ORMDL1Q9P0S3 153 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 CYSTM1Q9H1C7 97 aa12.13□□□□□ -0.47
TRAM1-201ENST00000262213 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
TRAM1-201ENST00000262213 KMT2BQ9UMN6 2715 aaPredicted RBP12.11□□□□□ -0.47
TRAM1-201ENST00000262213 C19orf73Q9NVV2 129 aa12.11□□□□□ -0.47
TRAM1-201ENST00000262213 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
TRAM1-201ENST00000262213 SS18Q15532 418 aa12.1□□□□□ -0.47
TRAM1-201ENST00000262213 TMEM86BQ8N661 226 aa12.1□□□□□ -0.47
TRAM1-201ENST00000262213 WFDC11Q8NEX6 87 aa12.1□□□□□ -0.47
TRAM1-201ENST00000262213 OBSCN-AS1Q96MR7 158 aa12.1□□□□□ -0.47
TRAM1-201ENST00000262213 WFDC9Q8NEX5 89 aa12.1□□□□□ -0.47
TRAM1-201ENST00000262213 IGLV10-54A0A075B6I4 117 aa12.09□□□□□ -0.47
TRAM1-201ENST00000262213 Q6JHZ5 121 aa12.09□□□□□ -0.47
TRAM1-201ENST00000262213 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
TRAM1-201ENST00000262213 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
TRAM1-201ENST00000262213 LINC01561Q8N1V8 128 aa12.07□□□□□ -0.48
TRAM1-201ENST00000262213 LINC01006Q8NI28 216 aa12.07□□□□□ -0.48
TRAM1-201ENST00000262213 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
TRAM1-201ENST00000262213 CMC4P56277 68 aaPredicted RBP12.07□□□□□ -0.48
TRAM1-201ENST00000262213 KRTAP1-3Q8IUG1 177 aa12.07□□□□□ -0.48
TRAM1-201ENST00000262213 Q8N3U1 123 aa12.07□□□□□ -0.48
TRAM1-201ENST00000262213 HILS1P60008 231 aa12.06□□□□□ -0.48
TRAM1-201ENST00000262213 LY6G6DO95868 133 aa12.06□□□□□ -0.48
TRAM1-201ENST00000262213 USP17L23D6RBM5 183 aa12.05□□□□□ -0.48
TRAM1-201ENST00000262213 CRYGAP11844 174 aa12.05□□□□□ -0.48
TRAM1-201ENST00000262213 NANOS2P60321 138 aaKnown RBP12.05□□□□□ -0.48
TRAM1-201ENST00000262213 Q8IZM0 81 aa12.04□□□□□ -0.48
TRAM1-201ENST00000262213 LINC00269Q8N2A0 174 aa12.04□□□□□ -0.48
TRAM1-201ENST00000262213 CCKP06307 115 aa12.04□□□□□ -0.48
TRAM1-201ENST00000262213 Q8N814 137 aa12.04□□□□□ -0.48
TRAM1-201ENST00000262213 DEFB4AO15263 64 aa12.03□□□□□ -0.48
TRAM1-201ENST00000262213 SERP2Q8N6R1 65 aa12.01□□□□□ -0.49
TRAM1-201ENST00000262213 C6orf99Q4VX62 202 aa12.01□□□□□ -0.49
TRAM1-201ENST00000262213 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
TRAM1-201ENST00000262213 TRAV23DV6A0A075B6W5 121 aa12□□□□□ -0.49
TRAM1-201ENST00000262213 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
TRAM1-201ENST00000262213 FAM19A1Q7Z5A9 133 aa12□□□□□ -0.49
TRAM1-201ENST00000262213 J3KT08 172 aa12□□□□□ -0.49
TRAM1-201ENST00000262213 Q8NDZ9 215 aa12□□□□□ -0.49
TRAM1-201ENST00000262213 J3QKU1 62 aa11.99□□□□□ -0.49
TRAM1-201ENST00000262213 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
TRAM1-201ENST00000262213 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
TRAM1-201ENST00000262213 S100A7L2Q5SY68 101 aa11.98□□□□□ -0.49
TRAM1-201ENST00000262213 TENM4Q6N022 2769 aa11.98□□□□□ -0.49
TRAM1-201ENST00000262213 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
TRAM1-201ENST00000262213 JMJD7-PLA2G4BH0Y9G9 81 aa11.97□□□□□ -0.49
TRAM1-201ENST00000262213 TMEM256-PLSCR3K7ERE1 68 aa11.97□□□□□ -0.49
TRAM1-201ENST00000262213 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
TRAM1-201ENST00000262213 PRO0255Q9UI72 69 aa11.97□□□□□ -0.49
TRAM1-201ENST00000262213 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.49
TRAM1-201ENST00000262213 C6orf223Q8N319 242 aa11.96□□□□□ -0.5
TRAM1-201ENST00000262213 DSCR8Q96T75 97 aa11.96□□□□□ -0.5
TRAM1-201ENST00000262213 GHRHP01286 108 aa11.95□□□□□ -0.5
TRAM1-201ENST00000262213 LINC00167Q96N53 147 aa11.95□□□□□ -0.5
TRAM1-201ENST00000262213 UPK3BQ9BT76 320 aa11.95□□□□□ -0.5
TRAM1-201ENST00000262213 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
TRAM1-201ENST00000262213 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
TRAM1-201ENST00000262213 REG3AQ06141 175 aa11.94□□□□□ -0.5
TRAM1-201ENST00000262213 HIVEP2P31629 2446 aa11.93□□□□□ -0.5
TRAM1-201ENST00000262213 C10orf25Q5T742 122 aa11.93□□□□□ -0.5
TRAM1-201ENST00000262213 X6R8D5 127 aa11.93□□□□□ -0.5
TRAM1-201ENST00000262213 LAMTOR3Q9UHA4 124 aa11.93□□□□□ -0.5
TRAM1-201ENST00000262213 UNQ6190/PRO20217Q6UXQ8 127 aa11.92□□□□□ -0.5
TRAM1-201ENST00000262213 UBL5Q9BZL1 73 aa11.92□□□□□ -0.5
TRAM1-201ENST00000262213 NDUFC2O95298 119 aa11.91□□□□□ -0.5
TRAM1-201ENST00000262213 M0R2N4 97 aa11.9□□□□□ -0.5
TRAM1-201ENST00000262213 HTN3P15516 51 aa11.9□□□□□ -0.5
TRAM1-201ENST00000262213 DEFB135Q30KP9 77 aa11.9□□□□□ -0.5
TRAM1-201ENST00000262213 LINC00612Q8N6U2 182 aa11.9□□□□□ -0.5
TRAM1-201ENST00000262213 SPATA3Q8NHX4 192 aa11.9□□□□□ -0.5
TRAM1-201ENST00000262213 DPH3Q96FX2 82 aa11.9□□□□□ -0.51
TRAM1-201ENST00000262213 COX17Q14061 63 aa11.89□□□□□ -0.51
TRAM1-201ENST00000262213 TMEM258P61165 79 aa11.89□□□□□ -0.51
TRAM1-201ENST00000262213 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
TRAM1-201ENST00000262213 C16orf95Q9H693 158 aa11.89□□□□□ -0.51
TRAM1-201ENST00000262213 RBM3P98179 157 aaKnown RBP11.88□□□□□ -0.51
TRAM1-201ENST00000262213 VWFP04275 2813 aa11.88□□□□□ -0.51
TRAM1-201ENST00000262213 SPAG11BQ08648 103 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms