RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
TUBGCP3-201ENST00000261965 DNAJC30Q96LL9 226 aa10□□□□□ -0.81
TUBGCP3-201ENST00000261965 ATOX1O00244 68 aa9.99□□□□□ -0.81
TUBGCP3-201ENST00000261965 NBEAL1Q6ZS30 2694 aa9.99□□□□□ -0.81
TUBGCP3-201ENST00000261965 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
TUBGCP3-201ENST00000261965 DEFB135Q30KP9 77 aa9.98□□□□□ -0.81
TUBGCP3-201ENST00000261965 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
TUBGCP3-201ENST00000261965 SNURFQ9Y675 71 aa9.98□□□□□ -0.81
TUBGCP3-201ENST00000261965 C6orf99Q4VX62 202 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 LINC00482Q8N8I6 264 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 J3KT08 172 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 J3QLI3 93 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 LINC00846Q9NV44 126 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 SBSPONQ8IVN8 264 aa9.97□□□□□ -0.81
TUBGCP3-201ENST00000261965 SMCR5Q8TEV8 140 aa9.96□□□□□ -0.81
TUBGCP3-201ENST00000261965 BBC3Q96PG8 261 aaPredicted RBP9.96□□□□□ -0.81
TUBGCP3-201ENST00000261965 APCP25054 2843 aa9.96□□□□□ -0.82
TUBGCP3-201ENST00000261965 RBM3P98179 157 aaKnown RBP9.96□□□□□ -0.82
TUBGCP3-201ENST00000261965 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
TUBGCP3-201ENST00000261965 H0YGX0 51 aa9.95□□□□□ -0.82
TUBGCP3-201ENST00000261965 KLK12Q9UKR0 248 aa9.95□□□□□ -0.82
TUBGCP3-201ENST00000261965 OVOL2Q9BRP0 275 aa9.95□□□□□ -0.82
TUBGCP3-201ENST00000261965 TEP1Q99973 2627 aaKnown RBP9.95□□□□□ -0.82
TUBGCP3-201ENST00000261965 FAM19A1Q7Z5A9 133 aa9.94□□□□□ -0.82
TUBGCP3-201ENST00000261965 KIR2DL5BQ8NHK3 375 aa9.94□□□□□ -0.82
TUBGCP3-201ENST00000261965 C4orf3Q8WVX3 66 aa9.94□□□□□ -0.82
TUBGCP3-201ENST00000261965 ITPR2Q14571 2701 aa9.94□□□□□ -0.82
TUBGCP3-201ENST00000261965 DEFB113Q30KQ7 82 aa9.93□□□□□ -0.82
TUBGCP3-201ENST00000261965 HRCT1Q6UXD1 115 aa9.93□□□□□ -0.82
TUBGCP3-201ENST00000261965 COX7CP15954 63 aa9.92□□□□□ -0.82
TUBGCP3-201ENST00000261965 HIGD2BQ4VC39 106 aa9.92□□□□□ -0.82
TUBGCP3-201ENST00000261965 FAM19A5Q7Z5A7 132 aaPredicted RBP9.92□□□□□ -0.82
TUBGCP3-201ENST00000261965 DNAJC9-AS1A6NH13 148 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 TRBV6-8A0A0A6YYG3 113 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 TRBV10-1A0A0K0K1A3 114 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 LRRC75A-AS1Q8N1F1 130 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 NOTCH1P46531 2555 aa9.91□□□□□ -0.82
TUBGCP3-201ENST00000261965 A0A096LNT2 108 aa9.9□□□□□ -0.82
TUBGCP3-201ENST00000261965 Q6Q795 121 aa9.9□□□□□ -0.82
TUBGCP3-201ENST00000261965 MAST4O15021 2626 aa9.9□□□□□ -0.82
TUBGCP3-201ENST00000261965 C1orf43Q9BWL3 253 aa9.9□□□□□ -0.82
TUBGCP3-201ENST00000261965 Q8N3U1 123 aa9.9□□□□□ -0.83
TUBGCP3-201ENST00000261965 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
TUBGCP3-201ENST00000261965 ZNF561-AS1K7EIQ3 104 aa9.88□□□□□ -0.83
TUBGCP3-201ENST00000261965 TIMM17BO60830 172 aa9.88□□□□□ -0.83
TUBGCP3-201ENST00000261965 HELZ2Q9BYK8 2649 aaKnown RBP9.88□□□□□ -0.83
TUBGCP3-201ENST00000261965 FAM222AQ5U5X8 452 aa9.88□□□□□ -0.83
TUBGCP3-201ENST00000261965 SPAG11BQ08648 103 aa9.87□□□□□ -0.83
TUBGCP3-201ENST00000261965 CR1P17927 2039 aa9.87□□□□□ -0.83
TUBGCP3-201ENST00000261965 Q6ZQY7 126 aa9.87□□□□□ -0.83
TUBGCP3-201ENST00000261965 FAM240AA0A1B0GVK7 77 aa9.87□□□□□ -0.83
TUBGCP3-201ENST00000261965 BEAN1Q3B7T3 259 aa9.87□□□□□ -0.83
TUBGCP3-201ENST00000261965 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 SVIPQ8NHG7 77 aa9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 MPLKIPQ8TAP9 179 aa9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 ZNF469Q96JG9 3925 aaPredicted RBP9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 CHCHD10Q8WYQ3 142 aaPredicted RBP9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
TUBGCP3-201ENST00000261965 C6orf223Q8N319 242 aa9.85□□□□□ -0.83
TUBGCP3-201ENST00000261965 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
TUBGCP3-201ENST00000261965 SERP2Q8N6R1 65 aa9.85□□□□□ -0.83
TUBGCP3-201ENST00000261965 PKIGQ9Y2B9 76 aa9.84□□□□□ -0.83
TUBGCP3-201ENST00000261965 BAHCC1Q9P281 2608 aa9.84□□□□□ -0.83
TUBGCP3-201ENST00000261965 HIVEP1P15822 2718 aa9.84□□□□□ -0.83
TUBGCP3-201ENST00000261965 IBA57-AS1B1ANH7 110 aa9.83□□□□□ -0.84
TUBGCP3-201ENST00000261965 REG3AQ06141 175 aa9.83□□□□□ -0.84
TUBGCP3-201ENST00000261965 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
TUBGCP3-201ENST00000261965 C3orf84H3BNL1 204 aa9.83□□□□□ -0.84
TUBGCP3-201ENST00000261965 TMEM256-PLSCR3K7ERE1 68 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 LRCOL1A6NCL2 159 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 RPL28P46779 137 aaKnown RBP9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 DPH3Q96FX2 82 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 IMUPQ9GZP8 106 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 NBPF19A0A087WUL8 3843 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 TRBV7-7A0A0K0K1E9 115 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 COL6A5A8TX70 2615 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 PRR4Q16378 134 aa9.82□□□□□ -0.84
TUBGCP3-201ENST00000261965 Q8N9L7 120 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 CAMK2N2Q96S95 79 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 JMJD7-PLA2G4BH0Y9G9 81 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 FSHBP01225 129 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 SMR3AQ99954 134 aa9.81□□□□□ -0.84
TUBGCP3-201ENST00000261965 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
TUBGCP3-201ENST00000261965 ZNF843Q8N446 348 aa9.8□□□□□ -0.84
TUBGCP3-201ENST00000261965 PRO0255Q9UI72 69 aa9.8□□□□□ -0.84
TUBGCP3-201ENST00000261965 CSDC2Q9Y534 153 aaKnown RBP9.8□□□□□ -0.84
TUBGCP3-201ENST00000261965 IGLV5-45A0A087WSX0 123 aa9.79□□□□□ -0.84
TUBGCP3-201ENST00000261965 SMIM9A6NGZ8 99 aa9.79□□□□□ -0.84
TUBGCP3-201ENST00000261965 C4orf26Q17RF5 130 aa9.79□□□□□ -0.84
TUBGCP3-201ENST00000261965 BRK1Q8WUW1 75 aa9.78□□□□□ -0.84
TUBGCP3-201ENST00000261965 TRBV6-4A0A1B0GX49 114 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms