RNA–Protein interactions for RNA: ENST00000261884.7

TRIP4-201, Transcript of thyroid hormone receptor interactor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIP4, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-201ENST00000261884 SNCGO76070 127 aa13.18□□□□□ -0.3
TRIP4-201ENST00000261884 HTN3P15516 51 aa13.18□□□□□ -0.3
TRIP4-201ENST00000261884 GAGE4Q13068 117 aa13.18□□□□□ -0.3
TRIP4-201ENST00000261884 GAGE5Q13069 117 aa13.18□□□□□ -0.3
TRIP4-201ENST00000261884 DAZ4Q86SG3 579 aaKnown RBP13.18□□□□□ -0.3
TRIP4-201ENST00000261884 DAZ3Q9NR90 486 aaKnown RBP13.18□□□□□ -0.3
TRIP4-201ENST00000261884 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
TRIP4-201ENST00000261884 GAGE2BQ13066 116 aa13.17□□□□□ -0.3
TRIP4-201ENST00000261884 GAGE2EQ4V326 116 aa13.17□□□□□ -0.3
TRIP4-201ENST00000261884 GAGE2DQ9UEU5 116 aa13.17□□□□□ -0.3
TRIP4-201ENST00000261884 LOC100131303A0A0U1RQF7 123 aa13.16□□□□□ -0.3
TRIP4-201ENST00000261884 GYPEP15421 78 aa13.16□□□□□ -0.3
TRIP4-201ENST00000261884 FAM19A3Q7Z5A8 133 aa13.16□□□□□ -0.3
TRIP4-201ENST00000261884 LINC00694P0DN24 101 aa13.15□□□□□ -0.3
TRIP4-201ENST00000261884 COX6A2Q02221 97 aa13.15□□□□□ -0.3
TRIP4-201ENST00000261884 DAND5Q8N907 189 aa13.15□□□□□ -0.3
TRIP4-201ENST00000261884 COL7A1Q02388 2944 aa13.14□□□□□ -0.31
TRIP4-201ENST00000261884 NDUFV3P56181 108 aaKnown RBP13.14□□□□□ -0.31
TRIP4-201ENST00000261884 FAM240AA0A1B0GVK7 77 aa13.13□□□□□ -0.31
TRIP4-201ENST00000261884 MRPL23Q16540 153 aaKnown RBP13.13□□□□□ -0.31
TRIP4-201ENST00000261884 C15orf53Q8NAA6 179 aa13.13□□□□□ -0.31
TRIP4-201ENST00000261884 H3BNG1 76 aa13.13□□□□□ -0.31
TRIP4-201ENST00000261884 LINC00242Q5T6M2 205 aa13.13□□□□□ -0.31
TRIP4-201ENST00000261884 LINC00308Q8TCZ7 52 aa13.13□□□□□ -0.31
TRIP4-201ENST00000261884 DEFB131BA0A096LNP1 70 aa13.12□□□□□ -0.31
TRIP4-201ENST00000261884 HERVK_113P63121 156 aa13.12□□□□□ -0.31
TRIP4-201ENST00000261884 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
TRIP4-201ENST00000261884 GAGE6Q13070 117 aa13.1□□□□□ -0.31
TRIP4-201ENST00000261884 Q9H8V8 135 aa13.1□□□□□ -0.31
TRIP4-201ENST00000261884 SMIM1B2RUZ4 78 aa13.1□□□□□ -0.31
TRIP4-201ENST00000261884 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
TRIP4-201ENST00000261884 CSDC2Q9Y534 153 aaKnown RBP13.1□□□□□ -0.31
TRIP4-201ENST00000261884 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
TRIP4-201ENST00000261884 DGAT2L7PQ6IED9 249 aa13.08□□□□□ -0.31
TRIP4-201ENST00000261884 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.31
TRIP4-201ENST00000261884 FBN3Q75N90 2809 aa13.07□□□□□ -0.32
TRIP4-201ENST00000261884 COX7A2LO14548 114 aa13.06□□□□□ -0.32
TRIP4-201ENST00000261884 NTM-AS1Q6ZSK4 140 aa13.06□□□□□ -0.32
TRIP4-201ENST00000261884 PPDPFQ9H3Y8 114 aa13.06□□□□□ -0.32
TRIP4-201ENST00000261884 A0A096LPF7 62 aa13.05□□□□□ -0.32
TRIP4-201ENST00000261884 TTC32Q5I0X7 151 aa13.05□□□□□ -0.32
TRIP4-201ENST00000261884 TRBV6-8A0A0A6YYG3 113 aa13.05□□□□□ -0.32
TRIP4-201ENST00000261884 COPS9Q8WXC6 57 aa13.03□□□□□ -0.32
TRIP4-201ENST00000261884 TRBV7-7A0A0K0K1E9 115 aa13.03□□□□□ -0.32
TRIP4-201ENST00000261884 CDC42SE2Q9NRR3 84 aa13.03□□□□□ -0.32
TRIP4-201ENST00000261884 TMEM243Q9BU79 118 aa13.02□□□□□ -0.33
TRIP4-201ENST00000261884 B5MCH6 92 aa13.01□□□□□ -0.33
TRIP4-201ENST00000261884 CCDC179H3BU77 68 aa13.01□□□□□ -0.33
TRIP4-201ENST00000261884 SS18L2Q9UHA2 77 aa13.01□□□□□ -0.33
TRIP4-201ENST00000261884 TRAV13-1A0A0B4J241 112 aa13.01□□□□□ -0.33
TRIP4-201ENST00000261884 A0A0U1RRA0 63 aa13□□□□□ -0.33
TRIP4-201ENST00000261884 HERV-K104P63124 156 aa13□□□□□ -0.33
TRIP4-201ENST00000261884 UBE2L6O14933 153 aa13□□□□□ -0.33
TRIP4-201ENST00000261884 SVIPQ8NHG7 77 aa13□□□□□ -0.33
TRIP4-201ENST00000261884 TRACP01848 142 aa12.99□□□□□ -0.33
TRIP4-201ENST00000261884 C22orf24Q9Y442 160 aa12.98□□□□□ -0.33
TRIP4-201ENST00000261884 ACYP1P07311 99 aa12.98□□□□□ -0.33
TRIP4-201ENST00000261884 CHCHD5Q9BSY4 110 aa12.98□□□□□ -0.33
TRIP4-201ENST00000261884 MEIG1Q5JSS6 88 aa12.96□□□□□ -0.33
TRIP4-201ENST00000261884 LELP1Q5T871 98 aa12.96□□□□□ -0.33
TRIP4-201ENST00000261884 LYPD5Q6UWN5 251 aa12.96□□□□□ -0.33
TRIP4-201ENST00000261884 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
TRIP4-201ENST00000261884 FAM218AQ96MZ4 157 aa12.95□□□□□ -0.34
TRIP4-201ENST00000261884 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
TRIP4-201ENST00000261884 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
TRIP4-201ENST00000261884 IMUPQ9GZP8 106 aa12.92□□□□□ -0.34
TRIP4-201ENST00000261884 BAALC-AS2P0C853 105 aa12.91□□□□□ -0.34
TRIP4-201ENST00000261884 RPL28P46779 137 aaKnown RBP12.91□□□□□ -0.34
TRIP4-201ENST00000261884 ESRGQ1W209 222 aa12.91□□□□□ -0.34
TRIP4-201ENST00000261884 A0A1B0GUV1 79 aa12.9□□□□□ -0.34
TRIP4-201ENST00000261884 KLK5Q9Y337 293 aaPredicted RBP12.9□□□□□ -0.34
TRIP4-201ENST00000261884 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
TRIP4-201ENST00000261884 TRAV13-2A0A0B4J235 113 aa12.89□□□□□ -0.35
TRIP4-201ENST00000261884 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
TRIP4-201ENST00000261884 LINC00337Q8N6G1 96 aa12.89□□□□□ -0.35
TRIP4-201ENST00000261884 COX7B2Q8TF08 81 aa12.89□□□□□ -0.35
TRIP4-201ENST00000261884 LINC00643Q86TS7 51 aa12.88□□□□□ -0.35
TRIP4-201ENST00000261884 DNAH7Q8WXX0 4024 aa12.88□□□□□ -0.35
TRIP4-201ENST00000261884 CSMD3Q7Z407 3707 aa12.88□□□□□ -0.35
TRIP4-201ENST00000261884 CCL18P55774 89 aa12.87□□□□□ -0.35
TRIP4-201ENST00000261884 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
TRIP4-201ENST00000261884 CRPP02741 224 aa12.86□□□□□ -0.35
TRIP4-201ENST00000261884 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
TRIP4-201ENST00000261884 TGP01266 2768 aa12.85□□□□□ -0.35
TRIP4-201ENST00000261884 APLNQ9ULZ1 77 aa12.84□□□□□ -0.35
TRIP4-201ENST00000261884 IGHV3OR16-9A0A0B4J2B5 98 aa12.84□□□□□ -0.35
TRIP4-201ENST00000261884 SND1-IT1Q9HBX3 110 aa12.84□□□□□ -0.35
TRIP4-201ENST00000261884 DYNC2H1Q8NCM8 4307 aaKnown RBP12.84□□□□□ -0.35
TRIP4-201ENST00000261884 FAM236AA0A1B0GUQ0 79 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 FAM236BA0A1B0GV22 79 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 MALP21145 153 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 WFDC10BQ8IUB3 73 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 Q9HAA7 133 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 LINC00588Q9Y4M8 146 aa12.83□□□□□ -0.36
TRIP4-201ENST00000261884 SMIM11BQ8TCY0 68 aa12.81□□□□□ -0.36
TRIP4-201ENST00000261884 WWC2-AS2Q96NR7 200 aa12.81□□□□□ -0.36
TRIP4-201ENST00000261884 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
TRIP4-201ENST00000261884 MUC7Q8TAX7 377 aa12.81□□□□□ -0.36
TRIP4-201ENST00000261884 UPK3BQ9BT76 320 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms