RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 COX11Q9Y6N1 276 aa7.71□□□□□ -1.18
PFDN1-201ENST00000261813 CLPSL2Q6UWE3 100 aa7.7□□□□□ -1.18
PFDN1-201ENST00000261813 ATOH7Q8N100 152 aa7.69□□□□□ -1.18
PFDN1-201ENST00000261813 CHCHD10Q8WYQ3 142 aaPredicted RBP7.69□□□□□ -1.18
PFDN1-201ENST00000261813 C1orf43Q9BWL3 253 aa7.69□□□□□ -1.18
PFDN1-201ENST00000261813 IGHV3OR16-9A0A0B4J2B5 98 aa7.68□□□□□ -1.18
PFDN1-201ENST00000261813 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
PFDN1-201ENST00000261813 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
PFDN1-201ENST00000261813 IGKV2D-24A0A075B6R9 120 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 A0A087WZ39 114 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 COX7A2LO14548 114 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 PSCAO43653 123 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 APOMO95445 188 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 XCL1P47992 114 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 MAPKAPK5-AS1Q8N8E1 139 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
PFDN1-201ENST00000261813 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
PFDN1-201ENST00000261813 LRCOL1A6NCL2 159 aa7.66□□□□□ -1.18
PFDN1-201ENST00000261813 E9PLD3 99 aa7.66□□□□□ -1.18
PFDN1-201ENST00000261813 COX6A2Q02221 97 aa7.66□□□□□ -1.18
PFDN1-201ENST00000261813 PLEKHB2Q96CS7 222 aa7.66□□□□□ -1.18
PFDN1-201ENST00000261813 A0A087WTM6 91 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 hDV102S1A0JD36 115 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 GAGE12HA6NDE8 117 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 MALP21145 153 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 WFDC2Q14508 124 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 SPATA45Q537H7 98 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 KRTAP26-1Q6PEX3 210 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 STPG4Q8N801 248 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 PAM16Q9Y3D7 125 aa7.65□□□□□ -1.18
PFDN1-201ENST00000261813 LRP1BQ9NZR2 4599 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 IGLV10-54A0A075B6I4 117 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 A0A1B0GV90 55 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 LEPROTO15243 131 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 FOXI1Q12951 378 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
PFDN1-201ENST00000261813 SFTA2Q6UW10 78 aa7.64□□□□□ -1.19
PFDN1-201ENST00000261813 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
PFDN1-201ENST00000261813 KRTAP10-2P60368 255 aa7.63□□□□□ -1.19
PFDN1-201ENST00000261813 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 LECT2O14960 151 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
PFDN1-201ENST00000261813 NMUP48645 174 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 C5orf38Q86SI9 138 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 PKHD1P08F94 4074 aa7.62□□□□□ -1.19
PFDN1-201ENST00000261813 TSTD3H0UI37 97 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 J3QQQ9 107 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 PRSS2P07478 247 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 SPINK8P0C7L1 97 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 FUSP35637 526 aaKnown RBP eCLIP7.61□□□□□ -1.19
PFDN1-201ENST00000261813 KRTAP9-3Q9BYQ3 159 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 KRTAP4-11Q9BYQ6 195 aa7.61□□□□□ -1.19
PFDN1-201ENST00000261813 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 F8WDY8 70 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 DLEU1O43261 78 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 COX8AP10176 69 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 CXCL5P42830 114 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 Q8N814 137 aa7.6□□□□□ -1.19
PFDN1-201ENST00000261813 C6orf226Q5I0X4 101 aa7.59□□□□□ -1.19
PFDN1-201ENST00000261813 SLC25A34Q6PIV7 304 aa7.59□□□□□ -1.19
PFDN1-201ENST00000261813 Q8IZM0 81 aa7.59□□□□□ -1.19
PFDN1-201ENST00000261813 COX7B2Q8TF08 81 aa7.59□□□□□ -1.19
PFDN1-201ENST00000261813 UQCR10Q9UDW1 63 aa7.59□□□□□ -1.19
PFDN1-201ENST00000261813 MYMXA0A1B0GTQ4 84 aa7.59□□□□□ -1.2
PFDN1-201ENST00000261813 HERV-K104P63124 156 aa7.59□□□□□ -1.2
PFDN1-201ENST00000261813 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.2
PFDN1-201ENST00000261813 IGKV2D-26A0A0A0MRZ7 120 aa7.58□□□□□ -1.2
PFDN1-201ENST00000261813 USP17L23D6RBM5 183 aa7.58□□□□□ -1.2
PFDN1-201ENST00000261813 CKS1BP61024 79 aa7.58□□□□□ -1.2
PFDN1-201ENST00000261813 C14orf177Q52M58 125 aa7.58□□□□□ -1.2
PFDN1-201ENST00000261813 BOD1L2Q8IYS8 172 aa7.58□□□□□ -1.2
PFDN1-201ENST00000261813 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 NDUFA1O15239 70 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 LCE5AQ5TCM9 118 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 C14orf144Q96I85 54 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 MIEN1Q9BRT3 115 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 APOBP04114 4563 aaKnown RBP7.57□□□□□ -1.2
PFDN1-201ENST00000261813 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
PFDN1-201ENST00000261813 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
PFDN1-201ENST00000261813 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.56□□□□□ -1.2
PFDN1-201ENST00000261813 C16orf90A8MZG2 172 aa7.56□□□□□ -1.2
PFDN1-201ENST00000261813 SPAG11BQ08648 103 aa7.56□□□□□ -1.2
PFDN1-201ENST00000261813 CIRBPQ14011 172 aaKnown RBP7.56□□□□□ -1.2
PFDN1-201ENST00000261813 C2orf48Q96LS8 159 aa7.56□□□□□ -1.2
PFDN1-201ENST00000261813 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
PFDN1-201ENST00000261813 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
PFDN1-201ENST00000261813 PCP2Q8IVA1 136 aa7.55□□□□□ -1.2
PFDN1-201ENST00000261813 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
PFDN1-201ENST00000261813 IGLV5-52A0A0A0MRZ9 124 aa7.54□□□□□ -1.2
PFDN1-201ENST00000261813 GCSHP23434 173 aa7.54□□□□□ -1.2
PFDN1-201ENST00000261813 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
PFDN1-201ENST00000261813 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
PFDN1-201ENST00000261813 HIGD1BQ9P298 99 aa7.54□□□□□ -1.2
PFDN1-201ENST00000261813 TSPEAR-AS2P59090 65 aa7.53□□□□□ -1.2
PFDN1-201ENST00000261813 KIAA0087Q14695 138 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms