RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 B5MCH6 92 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 PF4P02776 101 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 ATP5G1P05496 136 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 Q6Q795 121 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 NOTCH2Q04721 2471 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 CCDC179H3BU77 68 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 LINC00482Q8N8I6 264 aa11.36□□□□□ -0.59
TM9SF1-201ENST00000261789 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
TM9SF1-201ENST00000261789 PAX4O43316 350 aa11.35□□□□□ -0.59
TM9SF1-201ENST00000261789 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
TM9SF1-201ENST00000261789 SVIPQ8NHG7 77 aa11.35□□□□□ -0.59
TM9SF1-201ENST00000261789 Q8N3U1 123 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 X6R8D5 127 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 OTOGQ6ZRI0 2925 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 IBA57-AS1B1ANH7 110 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 FAM222AQ5U5X8 452 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 OR13C6PQ8NH95 151 aa11.34□□□□□ -0.59
TM9SF1-201ENST00000261789 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
TM9SF1-201ENST00000261789 MALP21145 153 aa11.33□□□□□ -0.6
TM9SF1-201ENST00000261789 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
TM9SF1-201ENST00000261789 MRPL23Q16540 153 aaKnown RBP11.32□□□□□ -0.6
TM9SF1-201ENST00000261789 PRR3P79522 188 aaKnown RBP11.31□□□□□ -0.6
TM9SF1-201ENST00000261789 GAGE2AQ6NT46 116 aa11.31□□□□□ -0.6
TM9SF1-201ENST00000261789 LINC00612Q8N6U2 182 aa11.31□□□□□ -0.6
TM9SF1-201ENST00000261789 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
TM9SF1-201ENST00000261789 SLPIP03973 132 aa11.3□□□□□ -0.6
TM9SF1-201ENST00000261789 DNAL4O96015 105 aa11.3□□□□□ -0.6
TM9SF1-201ENST00000261789 SS18Q15532 418 aa11.3□□□□□ -0.6
TM9SF1-201ENST00000261789 PRO0255Q9UI72 69 aa11.3□□□□□ -0.6
TM9SF1-201ENST00000261789 ACYP1P07311 99 aa11.29□□□□□ -0.6
TM9SF1-201ENST00000261789 LINC00269Q8N2A0 174 aa11.29□□□□□ -0.6
TM9SF1-201ENST00000261789 TRBV7-7A0A0K0K1E9 115 aa11.29□□□□□ -0.6
TM9SF1-201ENST00000261789 LECT2O14960 151 aa11.29□□□□□ -0.6
TM9SF1-201ENST00000261789 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
TM9SF1-201ENST00000261789 A0A1B0GUV1 79 aa11.27□□□□□ -0.61
TM9SF1-201ENST00000261789 C14orf132Q9NPU4 83 aa11.27□□□□□ -0.61
TM9SF1-201ENST00000261789 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
TM9SF1-201ENST00000261789 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
TM9SF1-201ENST00000261789 C9orf116Q5BN46 136 aaPredicted RBP11.26□□□□□ -0.61
TM9SF1-201ENST00000261789 Q8IZM0 81 aa11.25□□□□□ -0.61
TM9SF1-201ENST00000261789 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
TM9SF1-201ENST00000261789 H0YGX0 51 aa11.24□□□□□ -0.61
TM9SF1-201ENST00000261789 NCR3O14931 201 aa11.24□□□□□ -0.61
TM9SF1-201ENST00000261789 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
TM9SF1-201ENST00000261789 INAFM2P0DMQ5 153 aa11.24□□□□□ -0.61
TM9SF1-201ENST00000261789 ATRQ13535 2644 aa11.23□□□□□ -0.61
TM9SF1-201ENST00000261789 C3orf56Q8N813 242 aa11.23□□□□□ -0.61
TM9SF1-201ENST00000261789 CHCHD10Q8WYQ3 142 aaPredicted RBP11.23□□□□□ -0.61
TM9SF1-201ENST00000261789 KIAA0087Q14695 138 aa11.22□□□□□ -0.61
TM9SF1-201ENST00000261789 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
TM9SF1-201ENST00000261789 CELA1Q9UNI1 258 aa11.21□□□□□ -0.61
TM9SF1-201ENST00000261789 LY6G6DO95868 133 aa11.21□□□□□ -0.61
TM9SF1-201ENST00000261789 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 SMIM9A6NGZ8 99 aa11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 NANOS2P60321 138 aaKnown RBP11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 REG3AQ06141 175 aa11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
TM9SF1-201ENST00000261789 HTN3P15516 51 aa11.19□□□□□ -0.62
TM9SF1-201ENST00000261789 CD164L2Q6UWJ8 174 aa11.19□□□□□ -0.62
TM9SF1-201ENST00000261789 Q8NDZ9 215 aa11.19□□□□□ -0.62
TM9SF1-201ENST00000261789 NSD1Q96L73 2696 aaPredicted RBP11.19□□□□□ -0.62
TM9SF1-201ENST00000261789 LYRM9A8MSI8 78 aa11.18□□□□□ -0.62
TM9SF1-201ENST00000261789 DAD1P61803 113 aa11.18□□□□□ -0.62
TM9SF1-201ENST00000261789 IMUPQ9GZP8 106 aa11.18□□□□□ -0.62
TM9SF1-201ENST00000261789 CFAP161Q6P656 301 aa11.18□□□□□ -0.62
TM9SF1-201ENST00000261789 C6orf223Q8N319 242 aa11.17□□□□□ -0.62
TM9SF1-201ENST00000261789 INAFM1C9JVW0 142 aa11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 LINC00846Q9NV44 126 aa11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 C9orf66Q5T8R8 295 aa11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 OBSCN-AS1Q96MR7 158 aa11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 KLK5Q9Y337 293 aaPredicted RBP11.16□□□□□ -0.62
TM9SF1-201ENST00000261789 TEP1Q99973 2627 aaKnown RBP11.15□□□□□ -0.62
TM9SF1-201ENST00000261789 ORMDL1Q9P0S3 153 aa11.15□□□□□ -0.62
TM9SF1-201ENST00000261789 PKD1L1Q8TDX9 2849 aa11.14□□□□□ -0.63
TM9SF1-201ENST00000261789 IGKV3D-7A0A0C4DH55 119 aa11.14□□□□□ -0.63
TM9SF1-201ENST00000261789 UNQ6190/PRO20217Q6UXQ8 127 aa11.13□□□□□ -0.63
TM9SF1-201ENST00000261789 LINC01561Q8N1V8 128 aa11.13□□□□□ -0.63
TM9SF1-201ENST00000261789 Q8NAQ8 132 aa11.13□□□□□ -0.63
TM9SF1-201ENST00000261789 CXCL5P42830 114 aa11.12□□□□□ -0.63
TM9SF1-201ENST00000261789 SMIM20Q8N5G0 67 aa11.12□□□□□ -0.63
TM9SF1-201ENST00000261789 Q8N814 137 aa11.12□□□□□ -0.63
TM9SF1-201ENST00000261789 APOC4P55056 127 aa11.11□□□□□ -0.63
TM9SF1-201ENST00000261789 C6orf99Q4VX62 202 aa11.11□□□□□ -0.63
TM9SF1-201ENST00000261789 COX17Q14061 63 aa11.11□□□□□ -0.63
TM9SF1-201ENST00000261789 TMEM126AQ9H061 195 aa11.11□□□□□ -0.63
TM9SF1-201ENST00000261789 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
TM9SF1-201ENST00000261789 NDUFC2O95298 119 aa11.09□□□□□ -0.63
TM9SF1-201ENST00000261789 SPAG11BQ08648 103 aa11.09□□□□□ -0.63
TM9SF1-201ENST00000261789 A0A087WVE0 104 aa11.08□□□□□ -0.64
TM9SF1-201ENST00000261789 ANK2Q01484 3957 aa11.08□□□□□ -0.64
TM9SF1-201ENST00000261789 CYSRT1A8MQ03 144 aa11.08□□□□□ -0.64
TM9SF1-201ENST00000261789 S100A7L2Q5SY68 101 aa11.08□□□□□ -0.64
TM9SF1-201ENST00000261789 LINC00167Q96N53 147 aa11.07□□□□□ -0.64
TM9SF1-201ENST00000261789 SPART-AS1P0CW21 52 aa11.06□□□□□ -0.64
TM9SF1-201ENST00000261789 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
TM9SF1-201ENST00000261789 MIFP14174 115 aa11.06□□□□□ -0.64
TM9SF1-201ENST00000261789 LELP1Q5T871 98 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms