RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 MEGF8Q7Z7M0 2845 aa15.15■□□□□ 0.02
SIX3-201ENST00000260653 MUSTN1Q8IVN3 82 aa15.14■□□□□ 0.01
SIX3-201ENST00000260653 IGLL5B9A064 214 aa15.14■□□□□ 0.01
SIX3-201ENST00000260653 DAND5Q8N907 189 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 UBE2WQ96B02 151 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 A0A1B0GWB2 263 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 COX7A2LO14548 114 aa15.13■□□□□ 0.01
SIX3-201ENST00000260653 TIMM17BO60830 172 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 FOXI1Q12951 378 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 SPANXDQ9BXN6 97 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 SPANXCQ9NY87 97 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 A0A0U1RRA0 63 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 C9orf118A6NHY6 69 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 CRPP02741 224 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 PRSS2P07478 247 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 MIAQ16674 131 aa15.12■□□□□ 0.01
SIX3-201ENST00000260653 H3BUT2 72 aa15.11■□□□□ 0.01
SIX3-201ENST00000260653 NPC2P61916 151 aa15.11■□□□□ 0.01
SIX3-201ENST00000260653 MEIG1Q5JSS6 88 aa15.1■□□□□ 0.01
SIX3-201ENST00000260653 LINC01561Q8N1V8 128 aa15.1■□□□□ 0.01
SIX3-201ENST00000260653 APOMO95445 188 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 LINC01556Q5JQF7 62 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 LINC00588Q9Y4M8 146 aa15.09■□□□□ 0.01
SIX3-201ENST00000260653 CIRBPQ14011 172 aaKnown RBP15.09■□□□□ 0.01
SIX3-201ENST00000260653 MALP21145 153 aa15.08■□□□□ 0.01
SIX3-201ENST00000260653 EIF4EBP3O60516 100 aaPredicted RBP15.08■□□□□ 0
SIX3-201ENST00000260653 C6orf226Q5I0X4 101 aa15.08■□□□□ 0
SIX3-201ENST00000260653 CFC1BP0CG36 223 aa15.07■□□□□ 0
SIX3-201ENST00000260653 CFC1P0CG37 223 aa15.07■□□□□ 0
SIX3-201ENST00000260653 Q8IZM0 81 aa15.07■□□□□ 0
SIX3-201ENST00000260653 SPCS1Q9Y6A9 102 aa15.07■□□□□ 0
SIX3-201ENST00000260653 NHLRC4P0CG21 123 aaPredicted RBP15.06■□□□□ 0
SIX3-201ENST00000260653 TRAV8-4A0A0B4J246 113 aa15.05■□□□□ -0
SIX3-201ENST00000260653 C2orf82Q6UX34 121 aa15.05■□□□□ -0
SIX3-201ENST00000260653 CCL18P55774 89 aa15.04■□□□□ -0
SIX3-201ENST00000260653 CCDC179H3BU77 68 aa15.04■□□□□ -0
SIX3-201ENST00000260653 MT-ATP8P03928 68 aa15.04■□□□□ -0
SIX3-201ENST00000260653 DNAH10OSP0CZ25 163 aa15.04■□□□□ -0
SIX3-201ENST00000260653 KIAA0087Q14695 138 aa15.04■□□□□ -0
SIX3-201ENST00000260653 KRTAP21-3Q3LHN1 58 aa15.04■□□□□ -0
SIX3-201ENST00000260653 A0A1W2PPM0 123 aa15.02□□□□□ -0.01
SIX3-201ENST00000260653 LINC00308Q8TCZ7 52 aa15.02□□□□□ -0.01
SIX3-201ENST00000260653 IFITM1P13164 125 aa15.01□□□□□ -0.01
SIX3-201ENST00000260653 CSMD3Q7Z407 3707 aa15.01□□□□□ -0.01
SIX3-201ENST00000260653 KRTAP26-1Q6PEX3 210 aa15□□□□□ -0.01
SIX3-201ENST00000260653 SFTA2Q6UW10 78 aa15□□□□□ -0.01
SIX3-201ENST00000260653 SOSTDC1Q6X4U4 206 aa15□□□□□ -0.01
SIX3-201ENST00000260653 LYSTQ99698 3801 aa15□□□□□ -0.01
SIX3-201ENST00000260653 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.99□□□□□ -0.01
SIX3-201ENST00000260653 PFN2P35080 140 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 MIR7-3HGQ8N6C7 128 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 CDIP1Q9H305 208 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 KLK5Q9Y337 293 aaPredicted RBP14.98□□□□□ -0.01
SIX3-201ENST00000260653 A0A0B4J2C4 111 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 IBA57-AS1B1ANH7 110 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 LINC00158P58513 81 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 PRO1854Q9UHT4 67 aa14.98□□□□□ -0.01
SIX3-201ENST00000260653 SPAG11BQ08648 103 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 LINC00526Q96FQ7 95 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 DYNC2H1Q8NCM8 4307 aaKnown RBP14.97□□□□□ -0.01
SIX3-201ENST00000260653 SEC61GP60059 68 aa14.97□□□□□ -0.01
SIX3-201ENST00000260653 FABP2P12104 132 aa14.96□□□□□ -0.01
SIX3-201ENST00000260653 C6orf223Q8N319 242 aa14.96□□□□□ -0.02
SIX3-201ENST00000260653 C1orf43Q9BWL3 253 aa14.96□□□□□ -0.02
SIX3-201ENST00000260653 CXCL5P42830 114 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 UPK3BQ9BT76 320 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 Q9HAA7 133 aa14.95□□□□□ -0.02
SIX3-201ENST00000260653 IGKV2D-24A0A075B6R9 120 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 XGP55808 180 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 TENM2Q9NT68 2774 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 TMEM126AQ9H061 195 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 APLNQ9ULZ1 77 aa14.94□□□□□ -0.02
SIX3-201ENST00000260653 COPS9Q8WXC6 57 aa14.92□□□□□ -0.02
SIX3-201ENST00000260653 F8W1H4 67 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 H7C2G1 150 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 WFDC2Q14508 124 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 C10orf25Q5T742 122 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 DNAH7Q8WXX0 4024 aa14.91□□□□□ -0.02
SIX3-201ENST00000260653 C9orf116Q5BN46 136 aaPredicted RBP14.91□□□□□ -0.02
SIX3-201ENST00000260653 UNQ6190/PRO20217Q6UXQ8 127 aa14.9□□□□□ -0.02
SIX3-201ENST00000260653 ETDBQ3ZM63 59 aa14.9□□□□□ -0.02
SIX3-201ENST00000260653 DNAH1Q9P2D7 4330 aa14.89□□□□□ -0.03
SIX3-201ENST00000260653 HIGD2BQ4VC39 106 aa14.89□□□□□ -0.03
SIX3-201ENST00000260653 C15orf56Q8N910 161 aa14.88□□□□□ -0.03
SIX3-201ENST00000260653 FAM19A5Q7Z5A7 132 aaPredicted RBP14.88□□□□□ -0.03
SIX3-201ENST00000260653 PLECQ15149 4684 aaKnown RBP14.87□□□□□ -0.03
SIX3-201ENST00000260653 FBN3Q75N90 2809 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 LOC107984156A0A0G2JMH3 177 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 ARL17AQ8IVW1 177 aa14.87□□□□□ -0.03
SIX3-201ENST00000260653 NDUFV3P56181 108 aaKnown RBP14.87□□□□□ -0.03
SIX3-201ENST00000260653 NUPR2A6NF83 97 aa14.86□□□□□ -0.03
SIX3-201ENST00000260653 NTN5Q8WTR8 489 aaPredicted RBP14.86□□□□□ -0.03
SIX3-201ENST00000260653 Q1RN00 199 aa14.86□□□□□ -0.03
SIX3-201ENST00000260653 LOC107984640A0A0U1RRK4 108 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 UBE2DNLQ8IWF7 75 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 SND1-IT1Q9HBX3 110 aa14.85□□□□□ -0.03
SIX3-201ENST00000260653 ZNF561-AS1K7EIQ3 104 aa14.84□□□□□ -0.03
SIX3-201ENST00000260653 RPL13AP40429 203 aaKnown RBP14.84□□□□□ -0.03
SIX3-201ENST00000260653 COX17Q14061 63 aa14.84□□□□□ -0.03
SIX3-201ENST00000260653 STARD9Q9P2P6 4700 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms