RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 C6orf99Q4VX62 202 aa9.52□□□□□ -0.88
PEX1-201ENST00000248633 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.88
PEX1-201ENST00000248633 IGLV4-60A0A075B6I1 120 aa9.52□□□□□ -0.89
PEX1-201ENST00000248633 JMJD7-PLA2G4BH0Y9G9 81 aa9.52□□□□□ -0.89
PEX1-201ENST00000248633 PRB2P02812 416 aaPredicted RBP9.52□□□□□ -0.89
PEX1-201ENST00000248633 C16orf95Q9H693 158 aa9.52□□□□□ -0.89
PEX1-201ENST00000248633 HRNRQ86YZ3 2850 aaPredicted RBP9.52□□□□□ -0.89
PEX1-201ENST00000248633 ZNF561-AS1K7EIQ3 104 aa9.52□□□□□ -0.89
PEX1-201ENST00000248633 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
PEX1-201ENST00000248633 UNC79Q9P2D8 2635 aa9.51□□□□□ -0.89
PEX1-201ENST00000248633 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
PEX1-201ENST00000248633 SERP2Q8N6R1 65 aa9.51□□□□□ -0.89
PEX1-201ENST00000248633 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
PEX1-201ENST00000248633 IBA57-AS1B1ANH7 110 aa9.5□□□□□ -0.89
PEX1-201ENST00000248633 TMEM256-PLSCR3K7ERE1 68 aa9.5□□□□□ -0.89
PEX1-201ENST00000248633 LINC00846Q9NV44 126 aa9.5□□□□□ -0.89
PEX1-201ENST00000248633 APOC4P55056 127 aa9.5□□□□□ -0.89
PEX1-201ENST00000248633 MRAPQ8TCY5 172 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 DEFB135Q30KP9 77 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 C1orf43Q9BWL3 253 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
PEX1-201ENST00000248633 XAGE1AQ9HD64 81 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 KLK12Q9UKR0 248 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 SNURFQ9Y675 71 aa9.49□□□□□ -0.89
PEX1-201ENST00000248633 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
PEX1-201ENST00000248633 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
PEX1-201ENST00000248633 FAM19A5Q7Z5A7 132 aaPredicted RBP9.48□□□□□ -0.89
PEX1-201ENST00000248633 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
PEX1-201ENST00000248633 RPL28P46779 137 aaKnown RBP9.47□□□□□ -0.89
PEX1-201ENST00000248633 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
PEX1-201ENST00000248633 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
PEX1-201ENST00000248633 UTP20O75691 2785 aaKnown RBP9.47□□□□□ -0.89
PEX1-201ENST00000248633 TEX15Q9BXT5 2789 aa9.46□□□□□ -0.9
PEX1-201ENST00000248633 HRCT1Q6UXD1 115 aa9.46□□□□□ -0.9
PEX1-201ENST00000248633 LINC00959A0A1B0GUT2 108 aa9.45□□□□□ -0.9
PEX1-201ENST00000248633 A8MTW9 85 aa9.45□□□□□ -0.9
PEX1-201ENST00000248633 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
PEX1-201ENST00000248633 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
PEX1-201ENST00000248633 C5orf47Q569G3 176 aa9.45□□□□□ -0.9
PEX1-201ENST00000248633 LINC00482Q8N8I6 264 aa9.45□□□□□ -0.9
PEX1-201ENST00000248633 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
PEX1-201ENST00000248633 C11orf72Q8NBR9 251 aa9.44□□□□□ -0.9
PEX1-201ENST00000248633 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
PEX1-201ENST00000248633 HIGD2BQ4VC39 106 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 Q6ZQY7 126 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 CR1P17927 2039 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 IGLV1-51P01701 117 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 REG3AQ06141 175 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 KRTAP1-1Q07627 177 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 PRO0255Q9UI72 69 aa9.43□□□□□ -0.9
PEX1-201ENST00000248633 KIR2DL5BQ8NHK3 375 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 CRYBG3Q68DQ2 2970 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 SMIM9A6NGZ8 99 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 TMEM258P61165 79 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 Q6JHZ5 121 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 CAMK2N2Q96S95 79 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
PEX1-201ENST00000248633 SMG1Q96Q15 3661 aaKnown RBP9.42□□□□□ -0.9
PEX1-201ENST00000248633 DCHS2Q6V1P9 2916 aa9.41□□□□□ -0.9
PEX1-201ENST00000248633 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
PEX1-201ENST00000248633 CSDC2Q9Y534 153 aaKnown RBP9.41□□□□□ -0.9
PEX1-201ENST00000248633 NKAPP1Q8N9T2 125 aa9.4□□□□□ -0.9
PEX1-201ENST00000248633 CSMD1Q96PZ7 3565 aa9.4□□□□□ -0.91
PEX1-201ENST00000248633 DIRC1Q969H9 104 aa9.4□□□□□ -0.91
PEX1-201ENST00000248633 MPLKIPQ8TAP9 179 aa9.39□□□□□ -0.91
PEX1-201ENST00000248633 CCKP06307 115 aa9.38□□□□□ -0.91
PEX1-201ENST00000248633 NREPQ16612 68 aa9.38□□□□□ -0.91
PEX1-201ENST00000248633 DPH3Q96FX2 82 aa9.38□□□□□ -0.91
PEX1-201ENST00000248633 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
PEX1-201ENST00000248633 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
PEX1-201ENST00000248633 A0A087WZ39 114 aa9.37□□□□□ -0.91
PEX1-201ENST00000248633 BRK1Q8WUW1 75 aa9.37□□□□□ -0.91
PEX1-201ENST00000248633 Q8N814 137 aa9.37□□□□□ -0.91
PEX1-201ENST00000248633 PKIGQ9Y2B9 76 aa9.37□□□□□ -0.91
PEX1-201ENST00000248633 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
PEX1-201ENST00000248633 UBR5O95071 2799 aaPredicted RBP9.36□□□□□ -0.91
PEX1-201ENST00000248633 ZANQ9Y493 2812 aa9.36□□□□□ -0.91
PEX1-201ENST00000248633 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
PEX1-201ENST00000248633 IGKV2-28A0A075B6P5 120 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 A0A0U1RQV1 116 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 IGKV2D-28P01615 120 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 ATRQ13535 2644 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 APCP25054 2843 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 C3orf84H3BNL1 204 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
PEX1-201ENST00000248633 COX7BP24311 80 aa9.34□□□□□ -0.91
PEX1-201ENST00000248633 CELSR2Q9HCU4 2923 aa9.34□□□□□ -0.91
PEX1-201ENST00000248633 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
PEX1-201ENST00000248633 C9orf129Q5T035 196 aaKnown RBP9.33□□□□□ -0.92
PEX1-201ENST00000248633 ATP5EP2Q5VTU8 51 aa9.33□□□□□ -0.92
PEX1-201ENST00000248633 GCN1Q92616 2671 aaKnown RBP9.33□□□□□ -0.92
PEX1-201ENST00000248633 C6orf223Q8N319 242 aa9.33□□□□□ -0.92
PEX1-201ENST00000248633 IGHV3OR16-9A0A0B4J2B5 98 aa9.33□□□□□ -0.92
PEX1-201ENST00000248633 FHL2Q14192 279 aa9.33□□□□□ -0.92
PEX1-201ENST00000248633 F8WEM9 126 aa9.32□□□□□ -0.92
PEX1-201ENST00000248633 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms