RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SYCNQ0VAF6 134 aa11.27□□□□□ -0.61
SIN3B-201ENST00000248054 LINC00242Q5T6M2 205 aa11.27□□□□□ -0.61
SIN3B-201ENST00000248054 OXLD1Q5BKU9 147 aa11.27□□□□□ -0.61
SIN3B-201ENST00000248054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.27□□□□□ -0.61
SIN3B-201ENST00000248054 ABCA2Q9BZC7 2435 aa11.26□□□□□ -0.61
SIN3B-201ENST00000248054 LRRK2Q5S007 2527 aa11.26□□□□□ -0.61
SIN3B-201ENST00000248054 C11orf72Q8NBR9 251 aa11.26□□□□□ -0.61
SIN3B-201ENST00000248054 NDUFC2-KCTD14E9PQ53 114 aa11.26□□□□□ -0.61
SIN3B-201ENST00000248054 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
SIN3B-201ENST00000248054 ABCA12Q86UK0 2595 aa11.25□□□□□ -0.61
SIN3B-201ENST00000248054 A0A096LNT2 108 aa11.25□□□□□ -0.61
SIN3B-201ENST00000248054 V9GYY9 64 aa11.24□□□□□ -0.61
SIN3B-201ENST00000248054 A0A087WVE0 104 aa11.24□□□□□ -0.61
SIN3B-201ENST00000248054 H0Y9J4 135 aa11.23□□□□□ -0.61
SIN3B-201ENST00000248054 TLN2Q9Y4G6 2542 aa11.23□□□□□ -0.61
SIN3B-201ENST00000248054 CCKP06307 115 aa11.23□□□□□ -0.61
SIN3B-201ENST00000248054 LINC00315P59091 139 aa11.23□□□□□ -0.61
SIN3B-201ENST00000248054 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
SIN3B-201ENST00000248054 ADAMTSL4-AS1Q5T5F5 129 aa11.22□□□□□ -0.61
SIN3B-201ENST00000248054 Q6ZQY7 126 aa11.22□□□□□ -0.61
SIN3B-201ENST00000248054 A0A1B0GUV1 79 aa11.21□□□□□ -0.61
SIN3B-201ENST00000248054 LAMA1P25391 3075 aa11.21□□□□□ -0.61
SIN3B-201ENST00000248054 C4orf26Q17RF5 130 aa11.21□□□□□ -0.61
SIN3B-201ENST00000248054 A0A087WZ39 114 aa11.2□□□□□ -0.62
SIN3B-201ENST00000248054 LINC01561Q8N1V8 128 aa11.2□□□□□ -0.62
SIN3B-201ENST00000248054 XAGE1AQ9HD64 81 aa11.2□□□□□ -0.62
SIN3B-201ENST00000248054 Q6ZSN1 163 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 HIGD2AQ9BW72 106 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 ANKRD17O75179 2603 aaKnown RBP11.19□□□□□ -0.62
SIN3B-201ENST00000248054 A0A0J9YWU9 116 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 C4orf48Q5BLP8 95 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 FAM19A3Q7Z5A8 133 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
SIN3B-201ENST00000248054 CRYGAP11844 174 aa11.18□□□□□ -0.62
SIN3B-201ENST00000248054 ZNF73O43830 326 aaPredicted RBP11.18□□□□□ -0.62
SIN3B-201ENST00000248054 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
SIN3B-201ENST00000248054 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
SIN3B-201ENST00000248054 C2CD3Q4AC94 2353 aa11.17□□□□□ -0.62
SIN3B-201ENST00000248054 IGKV2-24A0A0C4DH68 120 aa11.15□□□□□ -0.62
SIN3B-201ENST00000248054 F8WDY8 70 aa11.15□□□□□ -0.62
SIN3B-201ENST00000248054 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
SIN3B-201ENST00000248054 C1orf195Q5TG92 126 aa11.14□□□□□ -0.63
SIN3B-201ENST00000248054 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
SIN3B-201ENST00000248054 EGFEM1PQ0D2K5 195 aa11.14□□□□□ -0.63
SIN3B-201ENST00000248054 SNURFQ9Y675 71 aa11.14□□□□□ -0.63
SIN3B-201ENST00000248054 VCANP13611 3396 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 SCXQ7RTU7 201 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 ZFYVE26Q68DK2 2539 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 IGLV4-60A0A075B6I1 120 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 TRAV7A0A075B6U4 112 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 A8MTW9 85 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 Q8N814 137 aa11.13□□□□□ -0.63
SIN3B-201ENST00000248054 MRPL55Q7Z7F7 128 aaKnown RBP11.12□□□□□ -0.63
SIN3B-201ENST00000248054 COX6A2Q02221 97 aa11.12□□□□□ -0.63
SIN3B-201ENST00000248054 ZNF706Q9Y5V0 76 aaPredicted RBP11.12□□□□□ -0.63
SIN3B-201ENST00000248054 IGKV4-1P06312 121 aa11.11□□□□□ -0.63
SIN3B-201ENST00000248054 SEC61GP60059 68 aa11.11□□□□□ -0.63
SIN3B-201ENST00000248054 SERP1Q9Y6X1 66 aa11.1□□□□□ -0.63
SIN3B-201ENST00000248054 CYSRT1A8MQ03 144 aa11.1□□□□□ -0.63
SIN3B-201ENST00000248054 PRO0628Q9UI54 55 aa11.1□□□□□ -0.63
SIN3B-201ENST00000248054 SPEGQ15772 3267 aa11.09□□□□□ -0.63
SIN3B-201ENST00000248054 SMIM26A0A096LP01 95 aa11.09□□□□□ -0.63
SIN3B-201ENST00000248054 Q6ZTC4 211 aa11.09□□□□□ -0.63
SIN3B-201ENST00000248054 RETNQ9HD89 108 aa11.09□□□□□ -0.63
SIN3B-201ENST00000248054 NUPR2A6NF83 97 aa11.07□□□□□ -0.64
SIN3B-201ENST00000248054 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
SIN3B-201ENST00000248054 PRB2P02812 416 aaPredicted RBP11.07□□□□□ -0.64
SIN3B-201ENST00000248054 EPG5Q9HCE0 2579 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 LINC00846Q9NV44 126 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 LYPD5Q6UWN5 251 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 JMJD1CQ15652 2540 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
SIN3B-201ENST00000248054 LINC00474Q9P2X8 69 aa11.05□□□□□ -0.64
SIN3B-201ENST00000248054 VPS13AQ96RL7 3174 aa11.05□□□□□ -0.64
SIN3B-201ENST00000248054 FN1P02751 2386 aaKnown RBP11.05□□□□□ -0.64
SIN3B-201ENST00000248054 H3BNG1 76 aa11.05□□□□□ -0.64
SIN3B-201ENST00000248054 TNRC18O15417 2968 aaPredicted RBP11.05□□□□□ -0.64
SIN3B-201ENST00000248054 POLQO75417 2590 aa11.05□□□□□ -0.64
SIN3B-201ENST00000248054 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
SIN3B-201ENST00000248054 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
SIN3B-201ENST00000248054 PRRC2CQ9Y520 2896 aaKnown RBP11.04□□□□□ -0.64
SIN3B-201ENST00000248054 X6R8D5 127 aa11.03□□□□□ -0.64
SIN3B-201ENST00000248054 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
SIN3B-201ENST00000248054 C2orf48Q96LS8 159 aa11.03□□□□□ -0.64
SIN3B-201ENST00000248054 A0A087WYN8 130 aa11.02□□□□□ -0.64
SIN3B-201ENST00000248054 COL6A3P12111 3177 aa11.02□□□□□ -0.64
SIN3B-201ENST00000248054 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.64
SIN3B-201ENST00000248054 PRR15LQ9BU68 103 aa11.02□□□□□ -0.64
SIN3B-201ENST00000248054 TRBV10-3A0A0K0K1G6 114 aa11.02□□□□□ -0.65
SIN3B-201ENST00000248054 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.65
SIN3B-201ENST00000248054 MYO15AQ9UKN7 3530 aa11.01□□□□□ -0.65
SIN3B-201ENST00000248054 KRTAP1-3Q8IUG1 177 aa11□□□□□ -0.65
SIN3B-201ENST00000248054 CASC2Q6XLA1 102 aa10.98□□□□□ -0.65
SIN3B-201ENST00000248054 MTORP42345 2549 aa10.98□□□□□ -0.65
SIN3B-201ENST00000248054 IGHV3OR16-9A0A0B4J2B5 98 aa10.98□□□□□ -0.65
SIN3B-201ENST00000248054 KRTAP24-1Q3LI83 254 aa10.98□□□□□ -0.65
SIN3B-201ENST00000248054 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
SIN3B-201ENST00000248054 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
SIN3B-201ENST00000248054 SOSTDC1Q6X4U4 206 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms