RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
DDX49-201ENST00000247003 C11orf68Q9H3H3 251 aaKnown RBP10.43□□□□□ -0.74
DDX49-201ENST00000247003 TRAV13-2A0A0B4J235 113 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 COX7A2LO14548 114 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 MALP21145 153 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 SND1-IT1Q9HBX3 110 aa10.42□□□□□ -0.74
DDX49-201ENST00000247003 LST1O00453 97 aa10.41□□□□□ -0.74
DDX49-201ENST00000247003 KRTAP10-11P60412 298 aa10.41□□□□□ -0.74
DDX49-201ENST00000247003 CKS1BP61024 79 aa10.41□□□□□ -0.74
DDX49-201ENST00000247003 EGFEM1PQ0D2K5 195 aa10.41□□□□□ -0.74
DDX49-201ENST00000247003 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
DDX49-201ENST00000247003 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
DDX49-201ENST00000247003 PFN2P35080 140 aa10.4□□□□□ -0.74
DDX49-201ENST00000247003 CLEC2BQ92478 149 aa10.4□□□□□ -0.74
DDX49-201ENST00000247003 CXCL5P42830 114 aa10.4□□□□□ -0.75
DDX49-201ENST00000247003 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
DDX49-201ENST00000247003 H3BT86 120 aa10.39□□□□□ -0.75
DDX49-201ENST00000247003 IGLV10-54A0A075B6I4 117 aa10.38□□□□□ -0.75
DDX49-201ENST00000247003 C2orf82Q6UX34 121 aa10.38□□□□□ -0.75
DDX49-201ENST00000247003 SPATA25Q9BR10 227 aa10.38□□□□□ -0.75
DDX49-201ENST00000247003 RETNQ9HD89 108 aa10.38□□□□□ -0.75
DDX49-201ENST00000247003 LINC01600Q96MT4 127 aa10.37□□□□□ -0.75
DDX49-201ENST00000247003 NBEAL2Q6ZNJ1 2754 aa10.36□□□□□ -0.75
DDX49-201ENST00000247003 H3BNG1 76 aa10.36□□□□□ -0.75
DDX49-201ENST00000247003 CCL18P55774 89 aa10.36□□□□□ -0.75
DDX49-201ENST00000247003 Q8N3U1 123 aa10.36□□□□□ -0.75
DDX49-201ENST00000247003 CARD19Q96LW7 228 aa10.36□□□□□ -0.75
DDX49-201ENST00000247003 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
DDX49-201ENST00000247003 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
DDX49-201ENST00000247003 SIGMAR1Q99720 223 aa10.35□□□□□ -0.75
DDX49-201ENST00000247003 TRRAPQ9Y4A5 3859 aa10.35□□□□□ -0.75
DDX49-201ENST00000247003 COX17Q14061 63 aa10.34□□□□□ -0.75
DDX49-201ENST00000247003 C21orf62-AS1Q17RA5 79 aa10.34□□□□□ -0.75
DDX49-201ENST00000247003 LYPD5Q6UWN5 251 aa10.34□□□□□ -0.75
DDX49-201ENST00000247003 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
DDX49-201ENST00000247003 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
DDX49-201ENST00000247003 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
DDX49-201ENST00000247003 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
DDX49-201ENST00000247003 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
DDX49-201ENST00000247003 KPRPQ5T749 579 aaPredicted RBP10.33□□□□□ -0.76
DDX49-201ENST00000247003 Q6ZTC4 211 aa10.32□□□□□ -0.76
DDX49-201ENST00000247003 TRACP01848 142 aa10.31□□□□□ -0.76
DDX49-201ENST00000247003 KIAA0087Q14695 138 aa10.31□□□□□ -0.76
DDX49-201ENST00000247003 PRR34Q9NV39 138 aa10.31□□□□□ -0.76
DDX49-201ENST00000247003 OR13C6PQ8NH95 151 aa10.3□□□□□ -0.76
DDX49-201ENST00000247003 SPAG11BQ08648 103 aa10.3□□□□□ -0.76
DDX49-201ENST00000247003 TRAV8-4A0A0B4J246 113 aa10.29□□□□□ -0.76
DDX49-201ENST00000247003 A0A0J9YWU9 116 aa10.29□□□□□ -0.76
DDX49-201ENST00000247003 KLK5Q9Y337 293 aaPredicted RBP10.29□□□□□ -0.76
DDX49-201ENST00000247003 TEX49A0A1B0GTD5 131 aa10.28□□□□□ -0.76
DDX49-201ENST00000247003 C11orf45Q8TAV5 145 aa10.28□□□□□ -0.76
DDX49-201ENST00000247003 SMIM11BQ8TCY0 68 aa10.28□□□□□ -0.76
DDX49-201ENST00000247003 STAB1Q9NY15 2570 aa10.27□□□□□ -0.76
DDX49-201ENST00000247003 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
DDX49-201ENST00000247003 H0YGX0 51 aa10.27□□□□□ -0.77
DDX49-201ENST00000247003 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
DDX49-201ENST00000247003 MUC7Q8TAX7 377 aa10.27□□□□□ -0.77
DDX49-201ENST00000247003 DNAL4O96015 105 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 DEFB131BA0A096LNP1 70 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 NDUFC2O95298 119 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 SCGB1A1P11684 91 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 WFDC10BQ8IUB3 73 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 CDIP1Q9H305 208 aa10.26□□□□□ -0.77
DDX49-201ENST00000247003 NANOS2P60321 138 aaKnown RBP10.24□□□□□ -0.77
DDX49-201ENST00000247003 FAM218AQ96MZ4 157 aa10.23□□□□□ -0.77
DDX49-201ENST00000247003 C9orf116Q5BN46 136 aaPredicted RBP10.22□□□□□ -0.77
DDX49-201ENST00000247003 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
DDX49-201ENST00000247003 UNQ6190/PRO20217Q6UXQ8 127 aa10.21□□□□□ -0.77
DDX49-201ENST00000247003 C6orf223Q8N319 242 aa10.21□□□□□ -0.77
DDX49-201ENST00000247003 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.78
DDX49-201ENST00000247003 TMEM126AQ9H061 195 aa10.21□□□□□ -0.78
DDX49-201ENST00000247003 PKD1L1Q8TDX9 2849 aa10.2□□□□□ -0.78
DDX49-201ENST00000247003 ESRGQ1W209 222 aa10.2□□□□□ -0.78
DDX49-201ENST00000247003 ZNF561-AS1K7EIQ3 104 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 DEFB121Q5J5C9 76 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 ANK2Q01484 3957 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 A0A087WYN8 130 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 GVQW2A0A096LPI5 108 aaPredicted RBP10.19□□□□□ -0.78
DDX49-201ENST00000247003 XGP55808 180 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 LINC00526Q96FQ7 95 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 Q9HAA7 133 aa10.19□□□□□ -0.78
DDX49-201ENST00000247003 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
DDX49-201ENST00000247003 LINC01556Q5JQF7 62 aa10.18□□□□□ -0.78
DDX49-201ENST00000247003 S100A7L2Q5SY68 101 aa10.18□□□□□ -0.78
DDX49-201ENST00000247003 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
DDX49-201ENST00000247003 TRAV10A0A0B4J240 114 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 NCR3O14931 201 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 LECT2O14960 151 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 MT-ATP8P03928 68 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 INAFM2P0DMQ5 153 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 C15orf53Q8NAA6 179 aa10.17□□□□□ -0.78
DDX49-201ENST00000247003 SNCGO76070 127 aa10.16□□□□□ -0.78
DDX49-201ENST00000247003 CAMK2N2Q96S95 79 aa10.16□□□□□ -0.78
DDX49-201ENST00000247003 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
DDX49-201ENST00000247003 A0A1B0GX51 115 aa10.14□□□□□ -0.79
DDX49-201ENST00000247003 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
DDX49-201ENST00000247003 DNAH3Q8TD57 4116 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms