RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DKK2Q9UBU2 259 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 TRAV12-1A0A0B4J245 112 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
TGFB3-201ENST00000238682 DEFB135Q30KP9 77 aa6.58□□□□□ -1.36
TGFB3-201ENST00000238682 TRBV30A0A0K0K1B3 111 aa6.58□□□□□ -1.36
TGFB3-201ENST00000238682 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
TGFB3-201ENST00000238682 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
TGFB3-201ENST00000238682 IGHV3OR16-12A0A075B7B8 117 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 IGHV4-28A0A0C4DH34 117 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 TEX49A0A1B0GTD5 131 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 H3BNG1 76 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 C2orf82Q6UX34 121 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 Q8N8P6 123 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
TGFB3-201ENST00000238682 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 DAND5Q8N907 189 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 NRACQ8N912 160 aa6.57□□□□□ -1.36
TGFB3-201ENST00000238682 PRSS1P07477 247 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 MGPP08493 103 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 HTN1P15515 57 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 LINC00315P59091 139 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 NOTCH1P46531 2555 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 TRGV1A0A0A0MS02 117 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 SORL1Q92673 2214 aa6.56□□□□□ -1.36
TGFB3-201ENST00000238682 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
TGFB3-201ENST00000238682 DNAH9Q9NYC9 4486 aa6.55□□□□□ -1.36
TGFB3-201ENST00000238682 COX6CP09669 75 aa6.55□□□□□ -1.36
TGFB3-201ENST00000238682 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
TGFB3-201ENST00000238682 CFC1P0CG37 223 aa6.55□□□□□ -1.36
TGFB3-201ENST00000238682 RPL39LQ96EH5 51 aaKnown RBP6.55□□□□□ -1.36
TGFB3-201ENST00000238682 VSIG2Q96IQ7 327 aa6.55□□□□□ -1.36
TGFB3-201ENST00000238682 IGLV2-18A0A075B6J9 118 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 PRM2P04554 102 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 RHOHQ15669 191 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 TRGV2A0A075B6R0 118 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 NDUFC1O43677 76 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 DAD1P61803 113 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
TGFB3-201ENST00000238682 A0A087WZ39 114 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 F8VRH5 84 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 M0QY20 66 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 Q6ZTI0 123 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 IGHV3-33P01772 117 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 FAM74A4Q5TZK3 123 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 SUMO4Q6EEV6 95 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 LINC00476Q8WZB0 136 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 AGRNO00468 2067 aa6.53□□□□□ -1.36
TGFB3-201ENST00000238682 K7EQD1 137 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.37
TGFB3-201ENST00000238682 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 SMIM2Q9BVW6 85 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.37
TGFB3-201ENST00000238682 PRO0255Q9UI72 69 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 INAFM2P0DMQ5 153 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 NOTCH3Q9UM47 2321 aa6.52□□□□□ -1.37
TGFB3-201ENST00000238682 RPL36AP83881 106 aaKnown RBP6.51□□□□□ -1.37
TGFB3-201ENST00000238682 FHL2Q14192 279 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 Q6JHZ5 121 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 Q6ZVQ6 151 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 RPL36ALQ969Q0 106 aaKnown RBP6.51□□□□□ -1.37
TGFB3-201ENST00000238682 TTTY13Q9BZ97 58 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 TRGV4A0A0C4DH28 118 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 ORMDL2Q53FV1 153 aa6.51□□□□□ -1.37
TGFB3-201ENST00000238682 H7C423 109 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
TGFB3-201ENST00000238682 DYNC2H1Q8NCM8 4307 aaKnown RBP6.5□□□□□ -1.37
TGFB3-201ENST00000238682 TRAV10A0A0B4J240 114 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 ZNF815PA8K554 130 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
TGFB3-201ENST00000238682 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 FAM218AQ96MZ4 157 aa6.5□□□□□ -1.37
TGFB3-201ENST00000238682 MUC4Q99102 2169 aa6.49□□□□□ -1.37
TGFB3-201ENST00000238682 A0A0J9YWU9 116 aa6.49□□□□□ -1.37
TGFB3-201ENST00000238682 I3L3M4 83 aa6.49□□□□□ -1.37
TGFB3-201ENST00000238682 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
TGFB3-201ENST00000238682 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
TGFB3-201ENST00000238682 IGHV3-73A0A0B4J1V6 119 aa6.48□□□□□ -1.37
TGFB3-201ENST00000238682 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
TGFB3-201ENST00000238682 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
TGFB3-201ENST00000238682 A0A0J9YY99 117 aa6.48□□□□□ -1.37
TGFB3-201ENST00000238682 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
TGFB3-201ENST00000238682 ZNF22P17026 224 aaPredicted RBP6.47□□□□□ -1.37
TGFB3-201ENST00000238682 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 LST1O00453 97 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 SCGB3A1Q96QR1 104 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 TIMM21Q9BVV7 248 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 ICOSQ9Y6W8 199 aa6.47□□□□□ -1.37
TGFB3-201ENST00000238682 TGP01266 2768 aa6.46□□□□□ -1.37
TGFB3-201ENST00000238682 PAX4O43316 350 aa6.46□□□□□ -1.37
TGFB3-201ENST00000238682 LGALS3P17931 250 aaKnown RBP6.46□□□□□ -1.37
TGFB3-201ENST00000238682 C2orf66Q6UXQ4 117 aa6.46□□□□□ -1.37
TGFB3-201ENST00000238682 TOMM6Q96B49 74 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms