RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 C2orf82Q6UX34 121 aa10.18□□□□□ -0.78
HDHD3-201ENST00000238379 DAND5Q8N907 189 aa10.18□□□□□ -0.78
HDHD3-201ENST00000238379 COX11Q9Y6N1 276 aa10.18□□□□□ -0.78
HDHD3-201ENST00000238379 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
HDHD3-201ENST00000238379 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
HDHD3-201ENST00000238379 A4D1N5 150 aa10.17□□□□□ -0.78
HDHD3-201ENST00000238379 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
HDHD3-201ENST00000238379 EIF4EBP3O60516 100 aaPredicted RBP10.16□□□□□ -0.78
HDHD3-201ENST00000238379 IFITM1P13164 125 aa10.16□□□□□ -0.78
HDHD3-201ENST00000238379 CKS1BP61024 79 aa10.16□□□□□ -0.78
HDHD3-201ENST00000238379 RPL24P83731 157 aaKnown RBP10.16□□□□□ -0.78
HDHD3-201ENST00000238379 TENM2Q9NT68 2774 aa10.15□□□□□ -0.78
HDHD3-201ENST00000238379 CXCL5P42830 114 aa10.15□□□□□ -0.78
HDHD3-201ENST00000238379 CFAP161Q6P656 301 aa10.15□□□□□ -0.78
HDHD3-201ENST00000238379 Q9HAA7 133 aa10.15□□□□□ -0.78
HDHD3-201ENST00000238379 IGKV2D-24A0A075B6R9 120 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 CFC1BP0CG36 223 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 CFC1P0CG37 223 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 NPC2P61916 151 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 SPAG11BQ08648 103 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 C9orf118A6NHY6 69 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 LINC00308Q8TCZ7 52 aa10.14□□□□□ -0.79
HDHD3-201ENST00000238379 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
HDHD3-201ENST00000238379 ERG28Q9UKR5 140 aa10.13□□□□□ -0.79
HDHD3-201ENST00000238379 DYNC2H1Q8NCM8 4307 aaKnown RBP10.12□□□□□ -0.79
HDHD3-201ENST00000238379 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 UBE2DNLQ8IWF7 75 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 LINC00526Q96FQ7 95 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 CSMD3Q7Z407 3707 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 LINC00158P58513 81 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
HDHD3-201ENST00000238379 H3BUT2 72 aa10.11□□□□□ -0.79
HDHD3-201ENST00000238379 PFN2P35080 140 aa10.11□□□□□ -0.79
HDHD3-201ENST00000238379 C15orf56Q8N910 161 aa10.11□□□□□ -0.79
HDHD3-201ENST00000238379 NTN5Q8WTR8 489 aaPredicted RBP10.11□□□□□ -0.79
HDHD3-201ENST00000238379 NAA38Q9BRA0 125 aaKnown RBP10.11□□□□□ -0.79
HDHD3-201ENST00000238379 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
HDHD3-201ENST00000238379 C10orf25Q5T742 122 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 UNQ6190/PRO20217Q6UXQ8 127 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 PPDPFQ9H3Y8 114 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 KRTAP1-5Q9BYS1 174 aa10.1□□□□□ -0.79
HDHD3-201ENST00000238379 PRO1854Q9UHT4 67 aa10.09□□□□□ -0.79
HDHD3-201ENST00000238379 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
HDHD3-201ENST00000238379 COX17Q14061 63 aa10.07□□□□□ -0.8
HDHD3-201ENST00000238379 C9orf116Q5BN46 136 aaPredicted RBP10.07□□□□□ -0.8
HDHD3-201ENST00000238379 RMI2Q96E14 147 aa10.07□□□□□ -0.8
HDHD3-201ENST00000238379 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
HDHD3-201ENST00000238379 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
HDHD3-201ENST00000238379 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
HDHD3-201ENST00000238379 A0A1W2PPM0 123 aa10.06□□□□□ -0.8
HDHD3-201ENST00000238379 TSPAN13O95857 204 aa10.06□□□□□ -0.8
HDHD3-201ENST00000238379 VAMP3Q15836 100 aa10.06□□□□□ -0.8
HDHD3-201ENST00000238379 CASC10Q5T4H9 136 aa10.06□□□□□ -0.8
HDHD3-201ENST00000238379 TGP01266 2768 aa10.06□□□□□ -0.8
HDHD3-201ENST00000238379 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
HDHD3-201ENST00000238379 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
HDHD3-201ENST00000238379 DNAH7Q8WXX0 4024 aa10.05□□□□□ -0.8
HDHD3-201ENST00000238379 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
HDHD3-201ENST00000238379 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
HDHD3-201ENST00000238379 LOC107984156A0A0G2JMH3 177 aa10.03□□□□□ -0.8
HDHD3-201ENST00000238379 ARL17AQ8IVW1 177 aa10.03□□□□□ -0.8
HDHD3-201ENST00000238379 SND1-IT1Q9HBX3 110 aa10.03□□□□□ -0.8
HDHD3-201ENST00000238379 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
HDHD3-201ENST00000238379 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
HDHD3-201ENST00000238379 FABP2P12104 132 aa10.02□□□□□ -0.81
HDHD3-201ENST00000238379 F8WDY8 70 aa10.01□□□□□ -0.81
HDHD3-201ENST00000238379 Q6ZRU5 148 aa10.01□□□□□ -0.81
HDHD3-201ENST00000238379 PLECQ15149 4684 aaKnown RBP10.01□□□□□ -0.81
HDHD3-201ENST00000238379 NBDYA0A0U1RRE5 68 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 UBE2V1Q13404 147 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 DNAH1Q9P2D7 4330 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 H7C2G1 150 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 TTC32Q5I0X7 151 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 LYSTQ99698 3801 aa10□□□□□ -0.81
HDHD3-201ENST00000238379 STARD9Q9P2P6 4700 aa9.99□□□□□ -0.81
HDHD3-201ENST00000238379 IGKV2-28A0A075B6P5 120 aa9.99□□□□□ -0.81
HDHD3-201ENST00000238379 IGKV2D-28P01615 120 aa9.99□□□□□ -0.81
HDHD3-201ENST00000238379 SPCS1Q9Y6A9 102 aa9.99□□□□□ -0.81
HDHD3-201ENST00000238379 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
HDHD3-201ENST00000238379 K7EP34 96 aa9.98□□□□□ -0.81
HDHD3-201ENST00000238379 SYCNQ0VAF6 134 aa9.98□□□□□ -0.81
HDHD3-201ENST00000238379 RPL13AP40429 203 aaKnown RBP9.98□□□□□ -0.81
HDHD3-201ENST00000238379 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
HDHD3-201ENST00000238379 LECT2O14960 151 aa9.97□□□□□ -0.81
HDHD3-201ENST00000238379 SLPIP03973 132 aa9.97□□□□□ -0.81
HDHD3-201ENST00000238379 Q1RN00 199 aa9.96□□□□□ -0.81
HDHD3-201ENST00000238379 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.81
HDHD3-201ENST00000238379 GTF2H5Q6ZYL4 71 aa9.96□□□□□ -0.82
HDHD3-201ENST00000238379 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
HDHD3-201ENST00000238379 NDUFC2O95298 119 aa9.95□□□□□ -0.82
HDHD3-201ENST00000238379 WFDC2Q14508 124 aa9.95□□□□□ -0.82
HDHD3-201ENST00000238379 NDUFC2-KCTD14E9PQ53 114 aa9.94□□□□□ -0.82
HDHD3-201ENST00000238379 PSCAO43653 123 aa9.94□□□□□ -0.82
HDHD3-201ENST00000238379 PSMB2P49721 201 aa9.94□□□□□ -0.82
HDHD3-201ENST00000238379 Q8NDZ9 215 aa9.94□□□□□ -0.82
HDHD3-201ENST00000238379 TRIAP1O43715 76 aa9.93□□□□□ -0.82
HDHD3-201ENST00000238379 RNF151Q2KHN1 245 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms