RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CMC4P56277 68 aaPredicted RBP6.36□□□□□ -1.39
SYDE2-201ENST00000234668 BAALC-AS2P0C853 105 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 NOTCH1P46531 2555 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 SLPIP03973 132 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 GAGE2EQ4V326 116 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 C9orf116Q5BN46 136 aaPredicted RBP6.35□□□□□ -1.39
SYDE2-201ENST00000234668 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 LINC00269Q8N2A0 174 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 GAGE2DQ9UEU5 116 aa6.35□□□□□ -1.39
SYDE2-201ENST00000234668 HERV-K104P63124 156 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 FBN1P35555 2871 aaKnown RBP6.34□□□□□ -1.39
SYDE2-201ENST00000234668 F8P00451 2351 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 H3BT86 120 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 CRPP02741 224 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.39
SYDE2-201ENST00000234668 SMIM11BQ8TCY0 68 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
SYDE2-201ENST00000234668 MAST4O15021 2626 aa6.34□□□□□ -1.4
SYDE2-201ENST00000234668 A0A087WYN8 130 aa6.33□□□□□ -1.4
SYDE2-201ENST00000234668 CITED1Q99966 193 aa6.33□□□□□ -1.4
SYDE2-201ENST00000234668 CELA1Q9UNI1 258 aa6.33□□□□□ -1.4
SYDE2-201ENST00000234668 A0A087WZ39 114 aa6.33□□□□□ -1.4
SYDE2-201ENST00000234668 M0QXV9 152 aa6.32□□□□□ -1.4
SYDE2-201ENST00000234668 ANGP03950 147 aaKnown RBP6.32□□□□□ -1.4
SYDE2-201ENST00000234668 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
SYDE2-201ENST00000234668 PRO0255Q9UI72 69 aa6.32□□□□□ -1.4
SYDE2-201ENST00000234668 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
SYDE2-201ENST00000234668 IGHV4-28A0A0C4DH34 117 aa6.31□□□□□ -1.4
SYDE2-201ENST00000234668 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
SYDE2-201ENST00000234668 NHLRC4P0CG21 123 aaPredicted RBP6.31□□□□□ -1.4
SYDE2-201ENST00000234668 SS18Q15532 418 aa6.31□□□□□ -1.4
SYDE2-201ENST00000234668 KIR2DL5BQ8NHK3 375 aa6.31□□□□□ -1.4
SYDE2-201ENST00000234668 TRAV13-2A0A0B4J235 113 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 C3orf56Q8N813 242 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 ANK2Q01484 3957 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 LECT2O14960 151 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 SMCR5Q8TEV8 140 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 COPS9Q8WXC6 57 aa6.3□□□□□ -1.4
SYDE2-201ENST00000234668 DAD1P61803 113 aa6.29□□□□□ -1.4
SYDE2-201ENST00000234668 GAGE2AQ6NT46 116 aa6.29□□□□□ -1.4
SYDE2-201ENST00000234668 NDUFV3P56181 108 aaKnown RBP6.29□□□□□ -1.4
SYDE2-201ENST00000234668 B5MCH6 92 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 CHCHD10Q8WYQ3 142 aaPredicted RBP6.28□□□□□ -1.4
SYDE2-201ENST00000234668 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 CCDC179H3BU77 68 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 RPL28P46779 137 aaKnown RBP6.28□□□□□ -1.4
SYDE2-201ENST00000234668 C14orf132Q9NPU4 83 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 DNAL4O96015 105 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 MALP21145 153 aa6.28□□□□□ -1.4
SYDE2-201ENST00000234668 NCR3O14931 201 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 REG3AQ06141 175 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 LINC01600Q96MT4 127 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 Q8NDZ9 215 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 KLK12Q9UKR0 248 aa6.27□□□□□ -1.41
SYDE2-201ENST00000234668 TRACP01848 142 aa6.26□□□□□ -1.41
SYDE2-201ENST00000234668 C9orf66Q5T8R8 295 aa6.26□□□□□ -1.41
SYDE2-201ENST00000234668 RETNQ9HD89 108 aa6.26□□□□□ -1.41
SYDE2-201ENST00000234668 SS18L2Q9UHA2 77 aa6.26□□□□□ -1.41
SYDE2-201ENST00000234668 UNQ6190/PRO20217Q6UXQ8 127 aa6.26□□□□□ -1.41
SYDE2-201ENST00000234668 DEFB121Q5J5C9 76 aa6.25□□□□□ -1.41
SYDE2-201ENST00000234668 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
SYDE2-201ENST00000234668 A0A1B0GUV1 79 aa6.25□□□□□ -1.41
SYDE2-201ENST00000234668 CFAP161Q6P656 301 aa6.25□□□□□ -1.41
SYDE2-201ENST00000234668 KIAA0087Q14695 138 aa6.25□□□□□ -1.41
SYDE2-201ENST00000234668 IGHV4-30-4P0DP06 118 aa6.24□□□□□ -1.41
SYDE2-201ENST00000234668 COL6A5A8TX70 2615 aa6.24□□□□□ -1.41
SYDE2-201ENST00000234668 Q8NAQ8 132 aa6.24□□□□□ -1.41
SYDE2-201ENST00000234668 SMIM9A6NGZ8 99 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 LYRM9A8MSI8 78 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 Q8IZM0 81 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 NANOS2P60321 138 aaKnown RBP6.23□□□□□ -1.41
SYDE2-201ENST00000234668 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
SYDE2-201ENST00000234668 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
SYDE2-201ENST00000234668 APOC4P55056 127 aa6.22□□□□□ -1.41
SYDE2-201ENST00000234668 XAGE1AQ9HD64 81 aa6.22□□□□□ -1.41
SYDE2-201ENST00000234668 SDIM1Q6ZPB5 146 aa6.21□□□□□ -1.41
SYDE2-201ENST00000234668 FAM240AA0A1B0GVK7 77 aa6.21□□□□□ -1.42
SYDE2-201ENST00000234668 SPART-AS1P0CW21 52 aa6.21□□□□□ -1.42
SYDE2-201ENST00000234668 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
SYDE2-201ENST00000234668 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 SPAG11BQ08648 103 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 HIGD2BQ4VC39 106 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 SVIPQ8NHG7 77 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 H0YGX0 51 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
SYDE2-201ENST00000234668 RPL18AQ02543 176 aaKnown RBP6.2□□□□□ -1.42
SYDE2-201ENST00000234668 LINC00846Q9NV44 126 aa6.2□□□□□ -1.42
SYDE2-201ENST00000234668 CXCL5P42830 114 aa6.19□□□□□ -1.42
SYDE2-201ENST00000234668 S100A7L2Q5SY68 101 aa6.19□□□□□ -1.42
SYDE2-201ENST00000234668 ENHOQ6UWT2 76 aa6.19□□□□□ -1.42
SYDE2-201ENST00000234668 BAHCC1Q9P281 2608 aa6.19□□□□□ -1.42
SYDE2-201ENST00000234668 WFDC10BQ8IUB3 73 aa6.19□□□□□ -1.42
SYDE2-201ENST00000234668 Q6Q795 121 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms