RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
TVP23C-201ENST00000225576 IBA57-AS1B1ANH7 110 aa11.26□□□□□ -0.61
TVP23C-201ENST00000225576 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
TVP23C-201ENST00000225576 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
TVP23C-201ENST00000225576 CKS1BP61024 79 aa11.25□□□□□ -0.61
TVP23C-201ENST00000225576 A4D1N5 150 aa11.24□□□□□ -0.61
TVP23C-201ENST00000225576 C9orf118A6NHY6 69 aa11.24□□□□□ -0.61
TVP23C-201ENST00000225576 K7ERJ3 54 aa11.24□□□□□ -0.61
TVP23C-201ENST00000225576 COPS9Q8WXC6 57 aa11.24□□□□□ -0.61
TVP23C-201ENST00000225576 RAB37Q96AX2 223 aa11.23□□□□□ -0.61
TVP23C-201ENST00000225576 PPDPFQ9H3Y8 114 aa11.23□□□□□ -0.61
TVP23C-201ENST00000225576 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
TVP23C-201ENST00000225576 CFC1BP0CG36 223 aa11.22□□□□□ -0.61
TVP23C-201ENST00000225576 CFC1P0CG37 223 aa11.22□□□□□ -0.61
TVP23C-201ENST00000225576 SPAG11BQ08648 103 aa11.22□□□□□ -0.61
TVP23C-201ENST00000225576 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
TVP23C-201ENST00000225576 DAND5Q8N907 189 aa11.22□□□□□ -0.61
TVP23C-201ENST00000225576 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
TVP23C-201ENST00000225576 A0A0U1RRA0 63 aa11.21□□□□□ -0.61
TVP23C-201ENST00000225576 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.61
TVP23C-201ENST00000225576 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
TVP23C-201ENST00000225576 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
TVP23C-201ENST00000225576 STAB2Q8WWQ8 2551 aa11.2□□□□□ -0.62
TVP23C-201ENST00000225576 A0A0B4J2C4 111 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 LINC00158P58513 81 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 RMI2Q96E14 147 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 Q9HAA7 133 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 H3BUT2 72 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 EIF4EBP3O60516 100 aaPredicted RBP11.19□□□□□ -0.62
TVP23C-201ENST00000225576 NPC2P61916 151 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
TVP23C-201ENST00000225576 COX17Q14061 63 aa11.18□□□□□ -0.62
TVP23C-201ENST00000225576 SOSTDC1Q6X4U4 206 aa11.18□□□□□ -0.62
TVP23C-201ENST00000225576 NTN5Q8WTR8 489 aaPredicted RBP11.18□□□□□ -0.62
TVP23C-201ENST00000225576 PFN2P35080 140 aa11.17□□□□□ -0.62
TVP23C-201ENST00000225576 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
TVP23C-201ENST00000225576 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
TVP23C-201ENST00000225576 C15orf56Q8N910 161 aa11.16□□□□□ -0.62
TVP23C-201ENST00000225576 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
TVP23C-201ENST00000225576 ZNF561-AS1K7EIQ3 104 aa11.15□□□□□ -0.62
TVP23C-201ENST00000225576 UNQ6190/PRO20217Q6UXQ8 127 aa11.15□□□□□ -0.62
TVP23C-201ENST00000225576 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
TVP23C-201ENST00000225576 F8WDY8 70 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 NAA38Q9BRA0 125 aaKnown RBP11.14□□□□□ -0.63
TVP23C-201ENST00000225576 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 A0A1W2PPM0 123 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 VAMP3Q15836 100 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 MUC7Q8TAX7 377 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
TVP23C-201ENST00000225576 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
TVP23C-201ENST00000225576 TSPAN13O95857 204 aa11.12□□□□□ -0.63
TVP23C-201ENST00000225576 HIGD2BQ4VC39 106 aa11.12□□□□□ -0.63
TVP23C-201ENST00000225576 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
TVP23C-201ENST00000225576 FABP2P12104 132 aa11.11□□□□□ -0.63
TVP23C-201ENST00000225576 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
TVP23C-201ENST00000225576 TRBV30A0A0K0K1B3 111 aa11.1□□□□□ -0.63
TVP23C-201ENST00000225576 C9orf116Q5BN46 136 aaPredicted RBP11.1□□□□□ -0.63
TVP23C-201ENST00000225576 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
TVP23C-201ENST00000225576 SND1-IT1Q9HBX3 110 aa11.09□□□□□ -0.63
TVP23C-201ENST00000225576 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
TVP23C-201ENST00000225576 KMT2CQ8NEZ4 4911 aaKnown RBP11.09□□□□□ -0.63
TVP23C-201ENST00000225576 UBE2V1Q13404 147 aa11.09□□□□□ -0.63
TVP23C-201ENST00000225576 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
TVP23C-201ENST00000225576 GAGE10A6NGK3 116 aa11.07□□□□□ -0.64
TVP23C-201ENST00000225576 CASC10Q5T4H9 136 aa11.07□□□□□ -0.64
TVP23C-201ENST00000225576 GTF2H5Q6ZYL4 71 aa11.07□□□□□ -0.64
TVP23C-201ENST00000225576 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
TVP23C-201ENST00000225576 K7EP34 96 aa11.06□□□□□ -0.64
TVP23C-201ENST00000225576 Q6ZRU5 148 aa11.06□□□□□ -0.64
TVP23C-201ENST00000225576 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
TVP23C-201ENST00000225576 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
TVP23C-201ENST00000225576 NBDYA0A0U1RRE5 68 aa11.05□□□□□ -0.64
TVP23C-201ENST00000225576 RPL13AP40429 203 aaKnown RBP11.04□□□□□ -0.64
TVP23C-201ENST00000225576 SYCNQ0VAF6 134 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 LYRM7Q5U5X0 104 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 H7C2G1 150 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 NDUFC2O95298 119 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 Q1RN00 199 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 WWC2-AS2Q96NR7 200 aa11.04□□□□□ -0.64
TVP23C-201ENST00000225576 RYR3Q15413 4870 aa11.03□□□□□ -0.64
TVP23C-201ENST00000225576 PSMB2P49721 201 aa11.02□□□□□ -0.65
TVP23C-201ENST00000225576 RNF151Q2KHN1 245 aa11.02□□□□□ -0.65
TVP23C-201ENST00000225576 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
TVP23C-201ENST00000225576 NDUFC2-KCTD14E9PQ53 114 aa10.99□□□□□ -0.65
TVP23C-201ENST00000225576 PSCAO43653 123 aa10.99□□□□□ -0.65
TVP23C-201ENST00000225576 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
TVP23C-201ENST00000225576 CARD19Q96LW7 228 aa10.99□□□□□ -0.65
TVP23C-201ENST00000225576 SLPIP03973 132 aa10.99□□□□□ -0.65
TVP23C-201ENST00000225576 TRBV20-1A0A075B6N2 111 aa10.98□□□□□ -0.65
TVP23C-201ENST00000225576 TRIAP1O43715 76 aa10.98□□□□□ -0.65
TVP23C-201ENST00000225576 LECT2O14960 151 aa10.97□□□□□ -0.65
TVP23C-201ENST00000225576 COX6CP09669 75 aa10.97□□□□□ -0.65
TVP23C-201ENST00000225576 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
TVP23C-201ENST00000225576 WFDC2Q14508 124 aa10.95□□□□□ -0.66
TVP23C-201ENST00000225576 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms