RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Hist1h2bfP10853 126 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Arl14eplQ3UKZ7 152 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 G0s2Q61585 103 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Hist1h2bbQ64475 126 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 SriQ6P069 198 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Hist1h2bkQ8CGP1 126 aaKnown RBP6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Hist1h2bpQ8CGP2 126 aaKnown RBP6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Arpc1aQ9R0Q6 370 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Opn3Q9WUK7 400 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Urb1Q571H0 2274 aaKnown RBP6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Vmn1r232A2RTT5 351 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Timp3P39876 211 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Rps20P60867 119 aaKnown RBP6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Spink11Q09TK7 88 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Timm23Q9WTQ8 209 aa6.87□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm6904E9PVF1 202 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm6812B1AXU1 112 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Dynlt3P56387 116 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Eda2rQ8BX35 297 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ovol1Q9WTJ2 267 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 PtprbB2RU80 1998 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Olfr1185-ps1F6XP16 303 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 PspnO70300 156 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 CampP51437 172 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ripply2Q2WG76 128 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tmem40Q4FJU9 225 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Spink6Q8BT20 105 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Dph3Q8K0W9 82 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Prelid3aQ8VE85 172 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 GlrxQ9QUH0 107 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Myo9bQ9QY06 2114 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 P01790 122 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Dtx1Q61010 627 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Rasl11aQ6IMB1 242 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ifi27Q8C6G0 260 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Derl1Q99J56 251 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm42715A0A087WP63 3095 aaKnown RBP6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Frem1Q684R7 2191 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Iglv1A0A075B663 117 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm45623A0A1B0GSF6 103 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Olfr748E9Q9Z0 307 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Olfr984Q8VFN1 314 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Klk10Q99M20 278 aa6.86□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Dnah12Q3V0Q1 3086 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm2174F6ZVF2 133 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Nxph4G3X9N5 304 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 IappP12968 93 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tnfsf15Q5UBV8 252 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Slc16a4Q8R0M8 500 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Pth2Q91W27 100 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Prss41Q920S2 322 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm26920S4R2A5 56 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ncor1Q60974 2453 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm6525A0A0A6YW33 106 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Igsf23B2RTN2 239 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 HrkP62816 92 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 AsipQ03288 131 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 B020031M17RikQ3UT11 173 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 CrygcQ61597 174 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ceacam11Q9D0Z8 303 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tnfrsf13cQ9D8D0 175 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ighv1-31A0A0A6YWK5 117 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Repin1Q5U4E2 545 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm26558Q8BLW8 286 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Saxo2Q8BQB6 394 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 RetnlgQ8K426 117 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Rnf151Q9CQ29 239 aa6.85□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Olfr1369-ps1A0A140T8K7 317 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm5129F6YHA9 99 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Dppa1Q810Y7 116 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Olfr981Q8VEU2 310 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Myo7bQ99MZ6 2113 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Atp5lQ9CPQ8 103 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Polr3kQ9CQZ7 108 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ascl2O35885 263 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 P01728 117 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Fam216bQ8CC14 138 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Mogat1Q91ZV4 335 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 GgctQ9D7X8 188 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Spaca3Q9D9X8 221 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Cep350E9Q309 3095 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Cd81P35762 236 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Atp6v0cP63082 155 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tmem170bP86050 132 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm10447Q3UQ92 135 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Gm17334Q8C6U3 126 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Mlst8Q9DCJ1 326 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tcf20Q9EPQ8 1987 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Tac3P55099 116 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Defa24Q5G865 93 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Znf474Q6V5K9 347 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Ifitm10Q8BR26 201 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Znf641Q8BZ34 422 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 Q8CF25 301 aa6.84□□□□□ -1.31
Sf3b1-201ENSMUST00000027127 1700020N15RikL7MTX3 112 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 P01788 123 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 P0C1Z5 52 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr1419Q7TQS2 343 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Olfr553Q7TRS6 326 aa6.84□□□□□ -1.32
Sf3b1-201ENSMUST00000027127 Map1lc3aQ91VR7 121 aa6.84□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 48.3 ms