RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 Q8N2B8 174 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 NF1P21359 2839 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 FAM240AA0A1B0GVK7 77 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 IGHV3-53P01767 116 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 RPL36AP83881 106 aaKnown RBP8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 RPL36ALQ969Q0 106 aaKnown RBP8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 SOSTDC1Q6X4U4 206 aa8.7□□□□□ -1.02
RBFOX1-224ENST00000641259 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 COX7A2LO14548 114 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 FSHBP01225 129 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 TRBV12-3P01733 135 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 RNASE3P12724 160 aaKnown RBP8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 CCDC168Q8NDH2 2452 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 V9GYY9 64 aa8.69□□□□□ -1.02
RBFOX1-224ENST00000641259 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 IGHG2P01859 326 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 C10orf99Q6UWK7 81 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 ZNF575Q86XF7 245 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 ZFAND2AQ8N6M9 145 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 FAM223BA6NKX1 122 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 HECTD1Q9ULT8 2610 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 C9orf47Q6ZRZ4 202 aa8.68□□□□□ -1.02
RBFOX1-224ENST00000641259 OTOGQ6ZRI0 2925 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 LINC00846Q9NV44 126 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 DAD1P61803 113 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 LINC01546A6NGU7 62 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 AMELXQ99217 191 aa8.67□□□□□ -1.02
RBFOX1-224ENST00000641259 MUC4Q99102 2169 aa8.66□□□□□ -1.02
RBFOX1-224ENST00000641259 CRYGAP11844 174 aa8.66□□□□□ -1.02
RBFOX1-224ENST00000641259 LINC00308Q8TCZ7 52 aa8.66□□□□□ -1.02
RBFOX1-224ENST00000641259 CFHR3Q02985 330 aa8.66□□□□□ -1.02
RBFOX1-224ENST00000641259 LRCOL1A6NCL2 159 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 OXTP01178 125 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 C1orf195Q5TG92 126 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 SEC61GP60059 68 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 FHL2Q14192 279 aa8.65□□□□□ -1.02
RBFOX1-224ENST00000641259 VSIG2Q96IQ7 327 aa8.65□□□□□ -1.03
RBFOX1-224ENST00000641259 CXCL5P42830 114 aa8.64□□□□□ -1.03
RBFOX1-224ENST00000641259 FAM218AQ96MZ4 157 aa8.64□□□□□ -1.03
RBFOX1-224ENST00000641259 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
RBFOX1-224ENST00000641259 Q6YL49 198 aa8.64□□□□□ -1.03
RBFOX1-224ENST00000641259 LAMTOR3Q9UHA4 124 aa8.64□□□□□ -1.03
RBFOX1-224ENST00000641259 IGLV1-40P01703 118 aa8.63□□□□□ -1.03
RBFOX1-224ENST00000641259 PSMB8P28062 276 aa8.63□□□□□ -1.03
RBFOX1-224ENST00000641259 Q9UF83 564 aa8.62□□□□□ -1.03
RBFOX1-224ENST00000641259 ACANP16112 2415 aa8.62□□□□□ -1.03
RBFOX1-224ENST00000641259 KRTAP1-1Q07627 177 aa8.62□□□□□ -1.03
RBFOX1-224ENST00000641259 SND1-IT1Q9HBX3 110 aa8.62□□□□□ -1.03
RBFOX1-224ENST00000641259 M0QY20 66 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 UBE2L6O14933 153 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 PRO0628Q9UI54 55 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 NIPBLQ6KC79 2804 aaeCLIP8.61□□□□□ -1.03
RBFOX1-224ENST00000641259 A0A087WYN8 130 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 TRBV27A0A0K0K1C4 114 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 ZNF702PQ9H963 129 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 IGHV4-4A0A075B6R2 117 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 C9orf129Q5T035 196 aaKnown RBP8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 DCANP1Q8TF63 244 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 COPS9Q8WXC6 57 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 TIMM17BO60830 172 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 RMI2Q96E14 147 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 LINC00467Q9BRT7 94 aa8.6□□□□□ -1.03
RBFOX1-224ENST00000641259 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 RPS28P62857 69 aaKnown RBP8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 COX8CQ7Z4L0 72 aa8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 LINC00474Q9P2X8 69 aa8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 F8WEM9 126 aa8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 SS18Q15532 418 aa8.59□□□□□ -1.03
RBFOX1-224ENST00000641259 F8P00451 2351 aa8.58□□□□□ -1.04
RBFOX1-224ENST00000641259 U3KQE9 123 aa8.58□□□□□ -1.04
RBFOX1-224ENST00000641259 H3BUA1 57 aa8.58□□□□□ -1.04
RBFOX1-224ENST00000641259 XCL1P47992 114 aa8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 USMG5Q96IX5 58 aa8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 XCL2Q9UBD3 114 aa8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 RPL28P46779 137 aaKnown RBP8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
RBFOX1-224ENST00000641259 LINC01561Q8N1V8 128 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 SMR3AQ99954 134 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 COX6A2Q02221 97 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 C18orf65Q6ZTR6 163 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 C5orf38Q86SI9 138 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 LITAFQ99732 161 aa8.56□□□□□ -1.04
RBFOX1-224ENST00000641259 IGHV4OR15-8A0A075B7B6 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms