RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 TMEM86BQ8N661 226 aa3.31□□□□□ -1.88
RTTN-220ENST00000640654 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.31□□□□□ -1.88
RTTN-220ENST00000640654 CLEC2BQ92478 149 aa3.31□□□□□ -1.88
RTTN-220ENST00000640654 RNF183Q96D59 192 aa3.31□□□□□ -1.88
RTTN-220ENST00000640654 LAMA5O15230 3695 aa3.31□□□□□ -1.88
RTTN-220ENST00000640654 PKD1L2Q7Z442 2459 aa3.31□□□□□ -1.88
RTTN-220ENST00000640654 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 TRAV4A0A0B4J268 109 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 A0A1B0GV72 72 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 K7EQD1 137 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 CCL24O00175 119 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 NDUFA7O95182 113 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 HERVK_113P63121 156 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 GAGE4Q13068 117 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 GAGE5Q13069 117 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 LINC00242Q5T6M2 205 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 C2orf82Q6UX34 121 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 Q6ZTI0 123 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 FAM19A3Q7Z5A8 133 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 ZNF843Q8N446 348 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 DAND5Q8N907 189 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 LINC00308Q8TCZ7 52 aa3.3□□□□□ -1.88
RTTN-220ENST00000640654 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
RTTN-220ENST00000640654 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 TRBV10-1A0A0K0K1A3 114 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 A0A0U1RRA0 63 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 SMIM1B2RUZ4 78 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 H3BT86 120 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 H7C423 109 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 LST1O00453 97 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 GIG44P09565 113 aaPredicted RBP3.29□□□□□ -1.88
RTTN-220ENST00000640654 COX6CP09669 75 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 CIRBPQ14011 172 aaKnown RBP3.29□□□□□ -1.88
RTTN-220ENST00000640654 SOSTDC1Q6X4U4 206 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 UBE2WQ96B02 151 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 ZNF625Q96I27 306 aaPredicted RBP3.29□□□□□ -1.88
RTTN-220ENST00000640654 CITED1Q99966 193 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 Q9H8V8 135 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
RTTN-220ENST00000640654 ESM1Q9NQ30 184 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 ITPR1Q14643 2758 aa3.29□□□□□ -1.88
RTTN-220ENST00000640654 LOC100131303A0A0U1RQF7 123 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 TEX49A0A1B0GTD5 131 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 F5H768 121 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 GAGE7O76087 117 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 GAGE12FP0CL80 117 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 GAGE12GP0CL81 117 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 GAGE12IP0CL82 117 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 RPL35AP18077 110 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 CMC4P56277 68 aaPredicted RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 DAZ2Q13117 558 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 DEFB121Q5J5C9 76 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 LCE3CQ5T5A8 94 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 DAZ4Q86SG3 579 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 TEX29Q8N6K0 151 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 DAZ3Q9NR90 486 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 CDC42SE2Q9NRR3 84 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 CSDC2Q9Y534 153 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 ANKRD17O75179 2603 aaKnown RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 DCHS1Q96JQ0 3298 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 USP9XQ93008 2570 aaPredicted RBP3.28□□□□□ -1.88
RTTN-220ENST00000640654 CSMD1Q96PZ7 3565 aa3.28□□□□□ -1.88
RTTN-220ENST00000640654 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 CRLF1O75462 422 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 HERV-K104P63124 156 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 GAGE6Q13070 117 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 MEIG1Q5JSS6 88 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 C15orf53Q8NAA6 179 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 WFDC11Q8NEX6 87 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 WFDC10AQ9H1F0 79 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 C16orf95Q9H693 158 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 PIEZO1Q92508 2521 aa3.27□□□□□ -1.89
RTTN-220ENST00000640654 TRGV2A0A075B6R0 118 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 TRGV4A0A0C4DH28 118 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 COX7A2LO14548 114 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 UBE2L6O14933 153 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 SNCGO76070 127 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 GAGE2BQ13066 116 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 MRPL23Q16540 153 aaKnown RBP3.26□□□□□ -1.89
RTTN-220ENST00000640654 GAGE2EQ4V326 116 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 LINC01006Q8NI28 216 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 COPS9Q8WXC6 57 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 OVOL2Q9BRP0 275 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 ANAPC13Q9BS18 74 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 GAGE2DQ9UEU5 116 aa3.26□□□□□ -1.89
RTTN-220ENST00000640654 RELNP78509 3460 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 IGSF10Q6WRI0 2623 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 CACNA1AO00555 2505 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 IGKV3OR2-268A0A0C4DH90 116 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 TRBV6-4A0A1B0GX49 114 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 IGLV1-51P01701 117 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 TTC32Q5I0X7 151 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 Q6Q795 121 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 CSNK1G2-AS1Q8NCQ2 148 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 PPDPFQ9H3Y8 114 aa3.25□□□□□ -1.89
RTTN-220ENST00000640654 USP9YO00507 2555 aaPredicted RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms