RNA–Protein interactions for RNA: ENST00000640298.1

RHOXF1P3-203, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

TSL 5 BASIC

Gene RHOXF1P3, Length 2,668 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-203ENST00000640298 GAGE12JA6NER3 117 aa11□□□□□ -0.65
RHOXF1P3-203ENST00000640298 GAGE4Q13068 117 aa11□□□□□ -0.65
RHOXF1P3-203ENST00000640298 GAGE5Q13069 117 aa11□□□□□ -0.65
RHOXF1P3-203ENST00000640298 CUBNO60494 3623 aa10.99□□□□□ -0.65
RHOXF1P3-203ENST00000640298 ACANP16112 2415 aa10.99□□□□□ -0.65
RHOXF1P3-203ENST00000640298 CCL24O00175 119 aa10.99□□□□□ -0.65
RHOXF1P3-203ENST00000640298 NDUFV3P56181 108 aaKnown RBP10.99□□□□□ -0.65
RHOXF1P3-203ENST00000640298 MEIG1Q5JSS6 88 aa10.98□□□□□ -0.65
RHOXF1P3-203ENST00000640298 NOP10Q9NPE3 64 aaKnown RBP10.98□□□□□ -0.65
RHOXF1P3-203ENST00000640298 AKAP9Q99996 3911 aa10.98□□□□□ -0.65
RHOXF1P3-203ENST00000640298 UNC79Q9P2D8 2635 aa10.97□□□□□ -0.65
RHOXF1P3-203ENST00000640298 GIG44P09565 113 aaPredicted RBP10.97□□□□□ -0.65
RHOXF1P3-203ENST00000640298 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
RHOXF1P3-203ENST00000640298 A0A1W2PRX2 142 aa10.96□□□□□ -0.65
RHOXF1P3-203ENST00000640298 TTC32Q5I0X7 151 aa10.96□□□□□ -0.65
RHOXF1P3-203ENST00000640298 C11orf44Q8N8P7 122 aa10.96□□□□□ -0.65
RHOXF1P3-203ENST00000640298 NF1P21359 2839 aa10.96□□□□□ -0.65
RHOXF1P3-203ENST00000640298 PLAC8L1A1L4L8 177 aa10.95□□□□□ -0.66
RHOXF1P3-203ENST00000640298 DNAJC9-AS1A6NH13 148 aa10.95□□□□□ -0.66
RHOXF1P3-203ENST00000640298 UBE2L6O14933 153 aa10.95□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GAGE6Q13070 117 aa10.95□□□□□ -0.66
RHOXF1P3-203ENST00000640298 TRACP01848 142 aa10.94□□□□□ -0.66
RHOXF1P3-203ENST00000640298 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
RHOXF1P3-203ENST00000640298 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
RHOXF1P3-203ENST00000640298 TRBV6-4A0A1B0GX49 114 aa10.93□□□□□ -0.66
RHOXF1P3-203ENST00000640298 C2CD3Q4AC94 2353 aa10.93□□□□□ -0.66
RHOXF1P3-203ENST00000640298 KRTAP1-1Q07627 177 aa10.93□□□□□ -0.66
RHOXF1P3-203ENST00000640298 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
RHOXF1P3-203ENST00000640298 MTORP42345 2549 aa10.93□□□□□ -0.66
RHOXF1P3-203ENST00000640298 TRGV2A0A075B6R0 118 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 PF4P02776 101 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 ACYP1P07311 99 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GCN1Q92616 2671 aaKnown RBP10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GAGE7O76087 117 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GAGE12FP0CL80 117 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GAGE12GP0CL81 117 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 GAGE12IP0CL82 117 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 FAM110AQ9BQ89 295 aa10.92□□□□□ -0.66
RHOXF1P3-203ENST00000640298 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
RHOXF1P3-203ENST00000640298 OVOL2Q9BRP0 275 aa10.91□□□□□ -0.66
RHOXF1P3-203ENST00000640298 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
RHOXF1P3-203ENST00000640298 LOC100131303A0A0U1RQF7 123 aa10.91□□□□□ -0.66
RHOXF1P3-203ENST00000640298 SETD2Q9BYW2 2564 aaPredicted RBP10.9□□□□□ -0.66
RHOXF1P3-203ENST00000640298 NIPBLQ6KC79 2804 aaeCLIP10.9□□□□□ -0.66
RHOXF1P3-203ENST00000640298 TRAV13-2A0A0B4J235 113 aa10.9□□□□□ -0.66
RHOXF1P3-203ENST00000640298 COX7B2Q8TF08 81 aa10.9□□□□□ -0.66
RHOXF1P3-203ENST00000640298 HECTD1Q9ULT8 2610 aa10.9□□□□□ -0.66
RHOXF1P3-203ENST00000640298 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.67
RHOXF1P3-203ENST00000640298 FAM222AQ5U5X8 452 aa10.9□□□□□ -0.67
RHOXF1P3-203ENST00000640298 ANK3Q12955 4377 aaKnown RBP10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 RPL28P46779 137 aaKnown RBP10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 CSNK1G2-AS1Q8NCQ2 148 aa10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 C19orf73Q9NVV2 129 aa10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 BAALC-AS2P0C853 105 aa10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 FAM218AQ96MZ4 157 aa10.89□□□□□ -0.67
RHOXF1P3-203ENST00000640298 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
RHOXF1P3-203ENST00000640298 WFDC10AQ9H1F0 79 aa10.88□□□□□ -0.67
RHOXF1P3-203ENST00000640298 SETXQ7Z333 2677 aaKnown RBP10.88□□□□□ -0.67
RHOXF1P3-203ENST00000640298 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
RHOXF1P3-203ENST00000640298 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
RHOXF1P3-203ENST00000640298 TRGV4A0A0C4DH28 118 aa10.87□□□□□ -0.67
RHOXF1P3-203ENST00000640298 B5MCH6 92 aa10.87□□□□□ -0.67
RHOXF1P3-203ENST00000640298 TRBV6-8A0A0A6YYG3 113 aa10.87□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IGLV1-51P01701 117 aa10.87□□□□□ -0.67
RHOXF1P3-203ENST00000640298 JMJD1CQ15652 2540 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IGLV4-60A0A075B6I1 120 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 CRPP02741 224 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 RPL35AP18077 110 aaKnown RBP10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 LINC00337Q8N6G1 96 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 FHL2Q14192 279 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
RHOXF1P3-203ENST00000640298 CCDC179H3BU77 68 aa10.85□□□□□ -0.67
RHOXF1P3-203ENST00000640298 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
RHOXF1P3-203ENST00000640298 NOTCH2Q04721 2471 aa10.85□□□□□ -0.67
RHOXF1P3-203ENST00000640298 IMUPQ9GZP8 106 aa10.85□□□□□ -0.67
RHOXF1P3-203ENST00000640298 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
RHOXF1P3-203ENST00000640298 A0A087WZ39 114 aa10.84□□□□□ -0.67
RHOXF1P3-203ENST00000640298 C16orf95Q9H693 158 aa10.84□□□□□ -0.67
RHOXF1P3-203ENST00000640298 SMR3AQ99954 134 aa10.83□□□□□ -0.68
RHOXF1P3-203ENST00000640298 IGKV3OR2-268A0A0C4DH90 116 aa10.83□□□□□ -0.68
RHOXF1P3-203ENST00000640298 IBA57-AS1B1ANH7 110 aa10.83□□□□□ -0.68
RHOXF1P3-203ENST00000640298 CHCHD5Q9BSY4 110 aa10.83□□□□□ -0.68
RHOXF1P3-203ENST00000640298 LINC00158P58513 81 aa10.82□□□□□ -0.68
RHOXF1P3-203ENST00000640298 SMCR5Q8TEV8 140 aa10.82□□□□□ -0.68
RHOXF1P3-203ENST00000640298 SS18L2Q9UHA2 77 aa10.82□□□□□ -0.68
RHOXF1P3-203ENST00000640298 CCL18P55774 89 aa10.82□□□□□ -0.68
RHOXF1P3-203ENST00000640298 LINC00643Q86TS7 51 aa10.82□□□□□ -0.68
RHOXF1P3-203ENST00000640298 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
RHOXF1P3-203ENST00000640298 SMIM11BQ8TCY0 68 aa10.81□□□□□ -0.68
RHOXF1P3-203ENST00000640298 Q9HAA7 133 aa10.81□□□□□ -0.68
RHOXF1P3-203ENST00000640298 MALP21145 153 aa10.81□□□□□ -0.68
RHOXF1P3-203ENST00000640298 RNASE1P07998 156 aaKnown RBP10.8□□□□□ -0.68
RHOXF1P3-203ENST00000640298 HIVEP2P31629 2446 aa10.79□□□□□ -0.68
RHOXF1P3-203ENST00000640298 H0YGX0 51 aa10.79□□□□□ -0.68
RHOXF1P3-203ENST00000640298 C5orf38Q86SI9 138 aa10.79□□□□□ -0.68
RHOXF1P3-203ENST00000640298 LINC00959A0A1B0GUT2 108 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms