RNA–Protein interactions for RNA: ENST00000639534.1

CHD1L-211, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 1,144 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-211ENST00000639534 K7EP34 96 aa10.1□□□□□ -0.79
CHD1L-211ENST00000639534 K7ERJ3 54 aa10.1□□□□□ -0.79
CHD1L-211ENST00000639534 HERV-K104P63124 156 aa10.1□□□□□ -0.79
CHD1L-211ENST00000639534 COPS9Q8WXC6 57 aa10.1□□□□□ -0.79
CHD1L-211ENST00000639534 ATRQ13535 2644 aa10.09□□□□□ -0.79
CHD1L-211ENST00000639534 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
CHD1L-211ENST00000639534 TMEM262E9PQX1 116 aa10.09□□□□□ -0.79
CHD1L-211ENST00000639534 H3BNG1 76 aa10.09□□□□□ -0.79
CHD1L-211ENST00000639534 IFITM1P13164 125 aa10.09□□□□□ -0.79
CHD1L-211ENST00000639534 VWFP04275 2813 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 RBX1P62877 108 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 SS18Q15532 418 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 LYRM7Q5U5X0 104 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 SPCS1Q9Y6A9 102 aa10.08□□□□□ -0.8
CHD1L-211ENST00000639534 CYSRT1A8MQ03 144 aa10.07□□□□□ -0.8
CHD1L-211ENST00000639534 MIAQ16674 131 aa10.07□□□□□ -0.8
CHD1L-211ENST00000639534 LITAFQ99732 161 aa10.07□□□□□ -0.8
CHD1L-211ENST00000639534 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 LINC00959A0A1B0GUT2 108 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 G3V4G9 280 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 HTN3P15516 51 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 LELP1Q5T871 98 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 MUSTN1Q8IVN3 82 aa10.06□□□□□ -0.8
CHD1L-211ENST00000639534 A0A087WZ39 114 aa10.05□□□□□ -0.8
CHD1L-211ENST00000639534 PPDPFQ9H3Y8 114 aa10.05□□□□□ -0.8
CHD1L-211ENST00000639534 Q9H8V8 135 aa10.05□□□□□ -0.8
CHD1L-211ENST00000639534 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
CHD1L-211ENST00000639534 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
CHD1L-211ENST00000639534 A0A096LPF7 62 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 IGHV3OR16-9A0A0B4J2B5 98 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 A4D1N5 150 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 APOMO95445 188 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 CFC1BP0CG36 223 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 CFC1P0CG37 223 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 COX7B2Q8TF08 81 aa10.04□□□□□ -0.8
CHD1L-211ENST00000639534 NAA38Q9BRA0 125 aaKnown RBP10.04□□□□□ -0.8
CHD1L-211ENST00000639534 FLNBO75369 2602 aaKnown RBP10.04□□□□□ -0.8
CHD1L-211ENST00000639534 PRSS2P07478 247 aa10.03□□□□□ -0.8
CHD1L-211ENST00000639534 ZNF625Q96I27 306 aaPredicted RBP10.03□□□□□ -0.8
CHD1L-211ENST00000639534 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
CHD1L-211ENST00000639534 RETNQ9HD89 108 aa10.02□□□□□ -0.81
CHD1L-211ENST00000639534 TSPAN13O95857 204 aa10.01□□□□□ -0.81
CHD1L-211ENST00000639534 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
CHD1L-211ENST00000639534 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
CHD1L-211ENST00000639534 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
CHD1L-211ENST00000639534 ADAMTSL4-AS1Q5T5F5 129 aa10□□□□□ -0.81
CHD1L-211ENST00000639534 ANGP03950 147 aaKnown RBP9.99□□□□□ -0.81
CHD1L-211ENST00000639534 ERG28Q9UKR5 140 aa9.99□□□□□ -0.81
CHD1L-211ENST00000639534 REG3AQ06141 175 aa9.98□□□□□ -0.81
CHD1L-211ENST00000639534 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
CHD1L-211ENST00000639534 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
CHD1L-211ENST00000639534 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
CHD1L-211ENST00000639534 TRBV20-1A0A075B6N2 111 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 KPRPQ5T749 579 aaPredicted RBP9.97□□□□□ -0.81
CHD1L-211ENST00000639534 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 C11orf45Q8TAV5 145 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 LINC00308Q8TCZ7 52 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
CHD1L-211ENST00000639534 A0A0J9YWU9 116 aa9.96□□□□□ -0.82
CHD1L-211ENST00000639534 COX7A2LO14548 114 aa9.96□□□□□ -0.82
CHD1L-211ENST00000639534 XCL1P47992 114 aa9.96□□□□□ -0.82
CHD1L-211ENST00000639534 Q6ZTC4 211 aa9.96□□□□□ -0.82
CHD1L-211ENST00000639534 Q8IZM0 81 aa9.96□□□□□ -0.82
CHD1L-211ENST00000639534 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 IBA57-AS1B1ANH7 110 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 F8W1H4 67 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 CXCL5P42830 114 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 C6orf226Q5I0X4 101 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
CHD1L-211ENST00000639534 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 BAHCC1Q9P281 2608 aa9.95□□□□□ -0.82
CHD1L-211ENST00000639534 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
CHD1L-211ENST00000639534 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
CHD1L-211ENST00000639534 PRR34Q9NV39 138 aa9.94□□□□□ -0.82
CHD1L-211ENST00000639534 TRAV8-4A0A0B4J246 113 aa9.93□□□□□ -0.82
CHD1L-211ENST00000639534 PSMB2P49721 201 aa9.93□□□□□ -0.82
CHD1L-211ENST00000639534 Q1RN00 199 aa9.93□□□□□ -0.82
CHD1L-211ENST00000639534 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
CHD1L-211ENST00000639534 TRAV10A0A0B4J240 114 aa9.92□□□□□ -0.82
CHD1L-211ENST00000639534 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
CHD1L-211ENST00000639534 K7EIL1 84 aa9.92□□□□□ -0.82
CHD1L-211ENST00000639534 SCGB1C2P0DMR2 95 aa9.92□□□□□ -0.82
CHD1L-211ENST00000639534 MALP21145 153 aa9.92□□□□□ -0.82
CHD1L-211ENST00000639534 EIF4EBP3O60516 100 aaPredicted RBP9.91□□□□□ -0.82
CHD1L-211ENST00000639534 CRPP02741 224 aa9.91□□□□□ -0.82
CHD1L-211ENST00000639534 COX6CP09669 75 aa9.91□□□□□ -0.82
CHD1L-211ENST00000639534 NANOS2P60321 138 aaKnown RBP9.91□□□□□ -0.82
CHD1L-211ENST00000639534 NPC2P61916 151 aa9.91□□□□□ -0.82
CHD1L-211ENST00000639534 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
CHD1L-211ENST00000639534 H3BMG7 143 aa9.9□□□□□ -0.82
CHD1L-211ENST00000639534 LINC00158P58513 81 aa9.9□□□□□ -0.82
CHD1L-211ENST00000639534 CKS1BP61024 79 aa9.9□□□□□ -0.82
CHD1L-211ENST00000639534 DAND5Q8N907 189 aa9.9□□□□□ -0.82
CHD1L-211ENST00000639534 C15orf53Q8NAA6 179 aa9.9□□□□□ -0.82
CHD1L-211ENST00000639534 FOXI1Q12951 378 aa9.89□□□□□ -0.83
CHD1L-211ENST00000639534 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms