RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
CACNA1A-243ENST00000637616 ATP5G1P05496 136 aa14.35□□□□□ -0.11
CACNA1A-243ENST00000637616 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
CACNA1A-243ENST00000637616 A0A087WYN8 130 aa14.34□□□□□ -0.11
CACNA1A-243ENST00000637616 DEFB114Q30KQ6 69 aa14.34□□□□□ -0.11
CACNA1A-243ENST00000637616 PRORYQ9H606 182 aa14.34□□□□□ -0.11
CACNA1A-243ENST00000637616 K7EQD1 137 aa14.33□□□□□ -0.11
CACNA1A-243ENST00000637616 MALP21145 153 aa14.33□□□□□ -0.11
CACNA1A-243ENST00000637616 IMUPQ9GZP8 106 aa14.33□□□□□ -0.11
CACNA1A-243ENST00000637616 PPDPFQ9H3Y8 114 aa14.33□□□□□ -0.11
CACNA1A-243ENST00000637616 IGKV2-28A0A075B6P5 120 aa14.33□□□□□ -0.12
CACNA1A-243ENST00000637616 IGKV2D-28P01615 120 aa14.33□□□□□ -0.12
CACNA1A-243ENST00000637616 NAV2Q8IVL1 2488 aa14.33□□□□□ -0.12
CACNA1A-243ENST00000637616 ODF3L2Q3SX64 289 aa14.33□□□□□ -0.12
CACNA1A-243ENST00000637616 PEMTQ9UBM1 199 aa14.33□□□□□ -0.12
CACNA1A-243ENST00000637616 CRPP02741 224 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 Q6YL49 198 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 COPS9Q8WXC6 57 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 C14orf132Q9NPU4 83 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 SDIM1Q6ZPB5 146 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 SND1-IT1Q9HBX3 110 aa14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 NOP10Q9NPE3 64 aaKnown RBP14.32□□□□□ -0.12
CACNA1A-243ENST00000637616 LRRK2Q5S007 2527 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 UBE2L6O14933 153 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 PLA2G2AP14555 144 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 STHQ8IWL8 128 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 C3orf22Q8N5N4 141 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 LINC00158P58513 81 aa14.31□□□□□ -0.12
CACNA1A-243ENST00000637616 A0A1W2PRX2 142 aa14.3□□□□□ -0.12
CACNA1A-243ENST00000637616 SMIM11BQ8TCY0 68 aa14.3□□□□□ -0.12
CACNA1A-243ENST00000637616 PFN2P35080 140 aa14.29□□□□□ -0.12
CACNA1A-243ENST00000637616 TMEM126AQ9H061 195 aa14.29□□□□□ -0.12
CACNA1A-243ENST00000637616 SETXQ7Z333 2677 aaKnown RBP14.29□□□□□ -0.12
CACNA1A-243ENST00000637616 ZNF469Q96JG9 3925 aaPredicted RBP14.29□□□□□ -0.12
CACNA1A-243ENST00000637616 IGKV3D-7A0A0C4DH55 119 aa14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 SLPIP03973 132 aa14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 C11orf68Q9H3H3 251 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 LOC107984640A0A0U1RRK4 108 aa14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 CSDC2Q9Y534 153 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 RPL28P46779 137 aaKnown RBP14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 FAM19A3Q7Z5A8 133 aa14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 COX7B2Q8TF08 81 aa14.28□□□□□ -0.12
CACNA1A-243ENST00000637616 TRAV13-2A0A0B4J235 113 aa14.27□□□□□ -0.12
CACNA1A-243ENST00000637616 DNAL4O96015 105 aa14.27□□□□□ -0.12
CACNA1A-243ENST00000637616 IGSF10Q6WRI0 2623 aa14.27□□□□□ -0.12
CACNA1A-243ENST00000637616 INAFM2P0DMQ5 153 aa14.26□□□□□ -0.13
CACNA1A-243ENST00000637616 TMEM243Q9BU79 118 aa14.26□□□□□ -0.13
CACNA1A-243ENST00000637616 C5orf38Q86SI9 138 aa14.26□□□□□ -0.13
CACNA1A-243ENST00000637616 IGLV4-60A0A075B6I1 120 aa14.25□□□□□ -0.13
CACNA1A-243ENST00000637616 A0A096LNT2 108 aa14.25□□□□□ -0.13
CACNA1A-243ENST00000637616 UQCRQO14949 82 aa14.25□□□□□ -0.13
CACNA1A-243ENST00000637616 CCL18P55774 89 aa14.25□□□□□ -0.13
CACNA1A-243ENST00000637616 ZFYVE26Q68DK2 2539 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 LECT2O14960 151 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 OR13C6PQ8NH95 151 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 NCR3O14931 201 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 FAM222AQ5U5X8 452 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 WFDC10AQ9H1F0 79 aa14.24□□□□□ -0.13
CACNA1A-243ENST00000637616 TRGV2A0A075B6R0 118 aa14.23□□□□□ -0.13
CACNA1A-243ENST00000637616 A0A087WVE0 104 aa14.23□□□□□ -0.13
CACNA1A-243ENST00000637616 C4orf3Q8WVX3 66 aa14.23□□□□□ -0.13
CACNA1A-243ENST00000637616 TRBV10-1A0A0K0K1A3 114 aa14.23□□□□□ -0.13
CACNA1A-243ENST00000637616 IL17DQ8TAD2 202 aa14.23□□□□□ -0.13
CACNA1A-243ENST00000637616 LINC00526Q96FQ7 95 aa14.22□□□□□ -0.13
CACNA1A-243ENST00000637616 CYSTM1Q9H1C7 97 aa14.22□□□□□ -0.13
CACNA1A-243ENST00000637616 LINC00846Q9NV44 126 aa14.22□□□□□ -0.13
CACNA1A-243ENST00000637616 FN1P02751 2386 aaKnown RBP14.22□□□□□ -0.13
CACNA1A-243ENST00000637616 PAX4O43316 350 aa14.21□□□□□ -0.13
CACNA1A-243ENST00000637616 CCDC168Q8NDH2 2452 aa14.2□□□□□ -0.14
CACNA1A-243ENST00000637616 hADV29S1A0JD25 119 aa14.2□□□□□ -0.14
CACNA1A-243ENST00000637616 J3QLI3 93 aa14.2□□□□□ -0.14
CACNA1A-243ENST00000637616 COX7CP15954 63 aa14.19□□□□□ -0.14
CACNA1A-243ENST00000637616 DSCR9P59020 149 aa14.19□□□□□ -0.14
CACNA1A-243ENST00000637616 C2orf48Q96LS8 159 aa14.19□□□□□ -0.14
CACNA1A-243ENST00000637616 CXCL5P42830 114 aa14.19□□□□□ -0.14
CACNA1A-243ENST00000637616 PF4P02776 101 aa14.18□□□□□ -0.14
CACNA1A-243ENST00000637616 RPL35AP18077 110 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-243ENST00000637616 IGHV4-31P0DP07 118 aa14.18□□□□□ -0.14
CACNA1A-243ENST00000637616 LRRC75A-AS1Q8N1F1 130 aa14.18□□□□□ -0.14
CACNA1A-243ENST00000637616 TRGV4A0A0C4DH28 118 aa14.16□□□□□ -0.14
CACNA1A-243ENST00000637616 FSHBP01225 129 aa14.16□□□□□ -0.14
CACNA1A-243ENST00000637616 PRR3P79522 188 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-243ENST00000637616 NBEAL2Q6ZNJ1 2754 aa14.15□□□□□ -0.14
CACNA1A-243ENST00000637616 A0A1B0GX51 115 aa14.15□□□□□ -0.14
CACNA1A-243ENST00000637616 IGHV3OR16-9A0A0B4J2B5 98 aa14.15□□□□□ -0.14
CACNA1A-243ENST00000637616 CR1P17927 2039 aa14.15□□□□□ -0.14
CACNA1A-243ENST00000637616 GIG44P09565 113 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-243ENST00000637616 PLAC8L1A1L4L8 177 aa14.13□□□□□ -0.15
CACNA1A-243ENST00000637616 CLPSL2Q6UWE3 100 aa14.13□□□□□ -0.15
CACNA1A-243ENST00000637616 KRTAP10-9P60411 292 aa14.12□□□□□ -0.15
CACNA1A-243ENST00000637616 HIST1H4AP62805 103 aaKnown RBP14.12□□□□□ -0.15
CACNA1A-243ENST00000637616 C6orf226Q5I0X4 101 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 ZNF462Q96JM2 2506 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 H0YGX0 51 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 XCL1P47992 114 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 WFDC9Q8NEX5 89 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 ATOX1O00244 68 aa14.11□□□□□ -0.15
CACNA1A-243ENST00000637616 RPL18AQ02543 176 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-243ENST00000637616 TRBV6-8A0A0A6YYG3 113 aa14.1□□□□□ -0.15
CACNA1A-243ENST00000637616 LINC01561Q8N1V8 128 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms