RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 HIST2H2BDQ6DRA6 164 aa11.22□□□□□ -0.61
CACNA1A-235ENST00000637004 SMIM1B2RUZ4 78 aa11.22□□□□□ -0.61
CACNA1A-235ENST00000637004 F8WDY8 70 aa11.22□□□□□ -0.61
CACNA1A-235ENST00000637004 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
CACNA1A-235ENST00000637004 C22orf24Q9Y442 160 aa11.22□□□□□ -0.61
CACNA1A-235ENST00000637004 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.61
CACNA1A-235ENST00000637004 FAM19A3Q7Z5A8 133 aa11.21□□□□□ -0.61
CACNA1A-235ENST00000637004 CRYGAP11844 174 aa11.21□□□□□ -0.62
CACNA1A-235ENST00000637004 MALP21145 153 aa11.21□□□□□ -0.62
CACNA1A-235ENST00000637004 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.62
CACNA1A-235ENST00000637004 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.62
CACNA1A-235ENST00000637004 ZFHX3Q15911 3703 aa11.2□□□□□ -0.62
CACNA1A-235ENST00000637004 TRAV13-2A0A0B4J235 113 aa11.2□□□□□ -0.62
CACNA1A-235ENST00000637004 KIR2DL5BQ8NHK3 375 aa11.2□□□□□ -0.62
CACNA1A-235ENST00000637004 HIST1H4AP62805 103 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-235ENST00000637004 CCL19Q99731 98 aa11.19□□□□□ -0.62
CACNA1A-235ENST00000637004 A8MTW9 85 aa11.19□□□□□ -0.62
CACNA1A-235ENST00000637004 RPL28P46779 137 aaKnown RBP11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 DEFB131AP59861 70 aa11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 RPS28P62857 69 aaKnown RBP11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 C2orf48Q96LS8 159 aa11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 KLK5Q9Y337 293 aaPredicted RBP11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 HIVEP1P15822 2718 aa11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 DNAL4O96015 105 aa11.18□□□□□ -0.62
CACNA1A-235ENST00000637004 PRM2P04554 102 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 RS1O15537 224 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 CRPP02741 224 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 C10orf99Q6UWK7 81 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 MRAPQ8TCY5 172 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 TRAV13-1A0A0B4J241 112 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 Q9HAA7 133 aa11.17□□□□□ -0.62
CACNA1A-235ENST00000637004 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
CACNA1A-235ENST00000637004 MAPK1IP1LQ8NDC0 245 aa11.16□□□□□ -0.62
CACNA1A-235ENST00000637004 ABCA2Q9BZC7 2435 aa11.16□□□□□ -0.62
CACNA1A-235ENST00000637004 C11orf72Q8NBR9 251 aa11.16□□□□□ -0.62
CACNA1A-235ENST00000637004 F8P00451 2351 aa11.15□□□□□ -0.62
CACNA1A-235ENST00000637004 SORL1Q92673 2214 aa11.15□□□□□ -0.62
CACNA1A-235ENST00000637004 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
CACNA1A-235ENST00000637004 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 MSMBP08118 114 aa11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 RPL18AQ02543 176 aaKnown RBP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 C10orf105Q8TEF2 133 aa11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 NIPBLQ6KC79 2804 aaeCLIP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.14□□□□□ -0.63
CACNA1A-235ENST00000637004 Q6JHZ5 121 aa11.12□□□□□ -0.63
CACNA1A-235ENST00000637004 SETD2Q9BYW2 2564 aaPredicted RBP11.12□□□□□ -0.63
CACNA1A-235ENST00000637004 hADV29S1A0JD25 119 aa11.12□□□□□ -0.63
CACNA1A-235ENST00000637004 H0YGX0 51 aa11.12□□□□□ -0.63
CACNA1A-235ENST00000637004 IGHV4-59P01825 116 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 C4orf26Q17RF5 130 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 INSP01308 110 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 UBE2E2Q96LR5 201 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 CDC42SE2Q9NRR3 84 aa11.11□□□□□ -0.63
CACNA1A-235ENST00000637004 LINC00337Q8N6G1 96 aa11.1□□□□□ -0.63
CACNA1A-235ENST00000637004 WFDC11Q8NEX6 87 aa11.1□□□□□ -0.63
CACNA1A-235ENST00000637004 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
CACNA1A-235ENST00000637004 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 TMEM258P61165 79 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 SERP2Q8N6R1 65 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 JMJD1CQ15652 2540 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 HRCT1Q6UXD1 115 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 MIR7-3HGQ8N6C7 128 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 OBSCN-AS1Q96MR7 158 aa11.09□□□□□ -0.63
CACNA1A-235ENST00000637004 IGKV2-28A0A075B6P5 120 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 AVPP01185 164 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 IGKV2D-28P01615 120 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 A0A087WYN8 130 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 IGKV3D-7A0A0C4DH55 119 aa11.08□□□□□ -0.64
CACNA1A-235ENST00000637004 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 NTM-AS1Q6ZSK4 140 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 LINC00846Q9NV44 126 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 IGHV4-30-2A0A087WSY4 118 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 B4DSR2 109 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 Q96MF0 132 aa11.07□□□□□ -0.64
CACNA1A-235ENST00000637004 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
CACNA1A-235ENST00000637004 CUBNO60494 3623 aa11.06□□□□□ -0.64
CACNA1A-235ENST00000637004 K7EQD1 137 aa11.06□□□□□ -0.64
CACNA1A-235ENST00000637004 UBE2L6O14933 153 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 MAP6D1Q9H9H5 199 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 TRGV1A0A0A0MS02 117 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 J3QLI3 93 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 Q5XG85 94 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 MXRA5Q9NR99 2828 aa11.05□□□□□ -0.64
CACNA1A-235ENST00000637004 LINC00158P58513 81 aa11.04□□□□□ -0.64
CACNA1A-235ENST00000637004 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
CACNA1A-235ENST00000637004 SLURP1P55000 103 aa11.04□□□□□ -0.64
CACNA1A-235ENST00000637004 USP17L23D6RBM5 183 aa11.04□□□□□ -0.64
CACNA1A-235ENST00000637004 TMEM243Q9BU79 118 aa11.04□□□□□ -0.64
CACNA1A-235ENST00000637004 LECT2O14960 151 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 OXTP01178 125 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 SMR3AQ99954 134 aa11.03□□□□□ -0.64
CACNA1A-235ENST00000637004 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms