RNA–Protein interactions for RNA: ENST00000636999.1

CACNA1D-220, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 4,212 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-220ENST00000636999 TINCRA0A1B0GVN0 87 aa5.58□□□□□ -1.52
CACNA1D-220ENST00000636999 HERV-K104P63124 156 aa5.58□□□□□ -1.52
CACNA1D-220ENST00000636999 TEX49A0A1B0GTD5 131 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 DMXL1Q9Y485 3027 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 Q9HAA7 133 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 IGLV4-69A0A075B6H9 119 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 TRIAP1O43715 76 aa5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 PRB2P02812 416 aaPredicted RBP5.57□□□□□ -1.52
CACNA1D-220ENST00000636999 MIR7-3HGQ8N6C7 128 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 COX7B2Q8TF08 81 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 CLUHP3Q96NS8 147 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 EDA2RQ9HAV5 297 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 FREM2Q5SZK8 3169 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 BEAN1Q3B7T3 259 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 TEP1Q99973 2627 aaKnown RBP5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 MAST4O15021 2626 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 CITED1Q99966 193 aa5.56□□□□□ -1.52
CACNA1D-220ENST00000636999 TRAV10A0A0B4J240 114 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 C1orf158Q8N1D5 194 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 H3BT86 120 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 KLK12Q9UKR0 248 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 PYGO1Q9Y3Y4 419 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 COX7A2LO14548 114 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 GHRHP01286 108 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 UBE2D1P51668 147 aa5.55□□□□□ -1.52
CACNA1D-220ENST00000636999 KRTAP1-1Q07627 177 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 C9orf153Q5TBE3 101 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 SS18L2Q9UHA2 77 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 BAHCC1Q9P281 2608 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 MGAM2Q2M2H8 2515 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 BOD1L1Q8NFC6 3051 aa5.54□□□□□ -1.52
CACNA1D-220ENST00000636999 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 H7C423 109 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 LINC00308Q8TCZ7 52 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 POM121L12Q8N7R1 296 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 TRBV6-8A0A0A6YYG3 113 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 LECT2O14960 151 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 RNF183Q96D59 192 aa5.53□□□□□ -1.52
CACNA1D-220ENST00000636999 TRBV30A0A0K0K1B3 111 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 XGP55808 180 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 MRPS36P82909 103 aaKnown RBP5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 LOC100131303A0A0U1RQF7 123 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 LINC01546A6NGU7 62 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 TIRAPP58753 221 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 LINC00315P59091 139 aa5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 KPRPQ5T749 579 aaPredicted RBP5.52□□□□□ -1.53
CACNA1D-220ENST00000636999 ATMQ13315 3056 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 A0A0J9YWU9 116 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 NDUFA1O15239 70 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 WFDC9Q8NEX5 89 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 IGKV3D-7A0A0C4DH55 119 aa5.51□□□□□ -1.53
CACNA1D-220ENST00000636999 H0YGX0 51 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 HAMPP81172 84 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 Q6ZSN1 163 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 CAMK2N2Q96S95 79 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 ORMDL1Q9P0S3 153 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 ACYP1P07311 99 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 UBE2D3P61077 147 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 UBE2D2P62837 147 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 PKIGQ9Y2B9 76 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 NKAPP1Q8N9T2 125 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 REG3AQ06141 175 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 LINC00269Q8N2A0 174 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 RETNQ9HD89 108 aa5.5□□□□□ -1.53
CACNA1D-220ENST00000636999 NANOS2P60321 138 aaKnown RBP5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 CXCL5P42830 114 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 CHCHD7Q9BUK0 85 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 SPANXDQ9BXN6 97 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 LINC00242Q5T6M2 205 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 LELP1Q5T871 98 aa5.49□□□□□ -1.53
CACNA1D-220ENST00000636999 COL12A1Q99715 3063 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 LINC00694P0DN24 101 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 RBMY1FQ15415 496 aaKnown RBP5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 FAM19A4Q96LR4 140 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 C14orf132Q9NPU4 83 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 ADGRG4Q8IZF6 3080 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 SPAG11BQ08648 103 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 Q9UF83 564 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 NCR3O14931 201 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 NDUFV3P56181 108 aaKnown RBP5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 COX6A2Q02221 97 aa5.48□□□□□ -1.53
CACNA1D-220ENST00000636999 GCN1Q92616 2671 aaKnown RBP5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 LST1O00453 97 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 AMELXQ99217 191 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 CR1P17927 2039 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 TIMM17BO60830 172 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 SLPIP03973 132 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 MUC4Q99102 2169 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 SMIM20Q8N5G0 67 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 CDC42SE2Q9NRR3 84 aa5.47□□□□□ -1.53
CACNA1D-220ENST00000636999 FHL2Q14192 279 aa5.46□□□□□ -1.54
CACNA1D-220ENST00000636999 CHCHD10Q8WYQ3 142 aaPredicted RBP5.46□□□□□ -1.54
CACNA1D-220ENST00000636999 NHLRC4P0CG21 123 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms