RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 MCRIP1C9JLW8 97 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 M0R1W7 72 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 DEGS1O15121 323 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 PIN1P1O15428 100 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 OR2H2O95918 312 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 GYPAP02724 150 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 RBP4P02753 201 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 TPT1P13693 172 aaKnown RBP1.4□□□□□ -2.19
CLN5-212ENST00000636602 DIAPH2-AS1Q14236 149 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 INSL4Q14641 139 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 GLIPR1L1Q6UWM5 242 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 LINC00322Q6ZN03 302 aaPredicted RBP1.4□□□□□ -2.19
CLN5-212ENST00000636602 LINC00299Q6ZSB3 139 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 TMEM229BQ8NBD8 167 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 DEFB108BQ8NET1 73 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 S100A16Q96FQ6 103 aaKnown RBP1.4□□□□□ -2.19
CLN5-212ENST00000636602 GAFA1Q96PS6 74 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 LPAR5Q9H1C0 372 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 BATF3Q9NR55 127 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 LINC00312Q9Y6C7 94 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 MAP1AP78559 2803 aaPredicted RBP1.4□□□□□ -2.19
CLN5-212ENST00000636602 ABCA2Q9BZC7 2435 aa1.4□□□□□ -2.19
CLN5-212ENST00000636602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.4□□□□□ -2.19
CLN5-212ENST00000636602 FLNAP21333 2647 aaKnown RBP1.39□□□□□ -2.19
CLN5-212ENST00000636602 ROS1P08922 2347 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 MED13LQ71F56 2210 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 NAV2Q8IVL1 2488 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 LOC107984640A0A0U1RRK4 108 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 TMEM30CPA0ZSE6 113 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 J3KT08 172 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 HIST1H1DP16402 221 aaKnown RBP1.39□□□□□ -2.19
CLN5-212ENST00000636602 EDDM3BP56851 147 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 NCS1P62166 190 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 LSM3P62310 102 aaKnown RBP1.39□□□□□ -2.19
CLN5-212ENST00000636602 MRPS10P82664 201 aaKnown RBP1.39□□□□□ -2.19
CLN5-212ENST00000636602 QRFPP83859 136 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 SSBP1Q04837 148 aaKnown RBP1.39□□□□□ -2.19
CLN5-212ENST00000636602 PIGYQ3MUY2 71 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 HEPN1Q6WQI6 88 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 ATG5Q9H1Y0 275 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 BANF2Q9H503 90 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 C19orf12Q9NSK7 152 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 C22orf24Q9Y442 160 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 POLQO75417 2590 aa1.39□□□□□ -2.19
CLN5-212ENST00000636602 FLNBO75369 2602 aaKnown RBP1.38□□□□□ -2.19
CLN5-212ENST00000636602 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
CLN5-212ENST00000636602 MYO9AB2RTY4 2548 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 AKAP6Q13023 2319 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 MXRA5Q9NR99 2828 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ZANQ9Y493 2812 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 OOSP1A8MZH6 123 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 FAM25AB3EWG3 89 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 FAM25CB3EWG5 89 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 FAM25GB3EWG6 89 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 M0QZK8 103 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 YPEL1O60688 119 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 TRACP01848 142 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ETV6P41212 452 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ZNF137PP52743 207 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 FOXA3P55318 350 aaPredicted RBP1.38□□□□□ -2.19
CLN5-212ENST00000636602 GNG2P59768 71 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ARPC4P59998 168 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 RPS28P62857 69 aaKnown RBP1.38□□□□□ -2.19
CLN5-212ENST00000636602 PSG9Q00887 426 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 MIR22HGQ0VDD5 57 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 SPCS2Q15005 226 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 HMGN3Q15651 99 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 MINOS1Q5TGZ0 78 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 FOXI2Q6ZQN5 318 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 C6orf201Q7Z4U5 140 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 VMO1Q7Z5L0 202 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 OR4S1Q8NGB4 309 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 BRK1Q8WUW1 75 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 CLEC2BQ92478 149 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ARL11Q969Q4 196 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 ARHGAP5-AS1Q96IT6 56 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 TAS2R8Q9NYW2 309 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 COMMD3Q9UBI1 195 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 JPT1Q9UK76 154 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 TNFSF18Q9UNG2 199 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 SPG11Q96JI7 2443 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 HIVEP1P15822 2718 aa1.38□□□□□ -2.19
CLN5-212ENST00000636602 NSD1Q96L73 2696 aaPredicted RBP1.37□□□□□ -2.19
CLN5-212ENST00000636602 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.37□□□□□ -2.19
CLN5-212ENST00000636602 PIGBOS1A0A0B4J2F0 54 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 NPFFO15130 113 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 TFF1P04155 84 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 SCTP09683 121 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 AKAIN1P0CW23 69 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 CCL3L1P16619 93 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 FAUP35544 74 aaKnown RBP1.37□□□□□ -2.19
CLN5-212ENST00000636602 MORN2Q502X0 79 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 SNX29P2Q8IUI4 249 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.37□□□□□ -2.19
CLN5-212ENST00000636602 SMIM4Q8WVI0 70 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 S100ZQ8WXG8 99 aa1.37□□□□□ -2.19
CLN5-212ENST00000636602 SMR3AQ99954 134 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms