RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 FAM240AA0A1B0GVK7 77 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 ICOSQ9Y6W8 199 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 TTC32Q5I0X7 151 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 VSIG2Q96IQ7 327 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 NDUFA12Q9UI09 145 aa11.1□□□□□ -0.63
CLN8-209ENST00000635970 IGHV3-64A0A075B6Q5 118 aa11.09□□□□□ -0.63
CLN8-209ENST00000635970 NDUFV3P56181 108 aaKnown RBP11.09□□□□□ -0.63
CLN8-209ENST00000635970 C2orf82Q6UX34 121 aa11.09□□□□□ -0.63
CLN8-209ENST00000635970 TNFRSF18Q9Y5U5 241 aa11.09□□□□□ -0.63
CLN8-209ENST00000635970 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
CLN8-209ENST00000635970 PRSS2P07478 247 aa11.08□□□□□ -0.64
CLN8-209ENST00000635970 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
CLN8-209ENST00000635970 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
CLN8-209ENST00000635970 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
CLN8-209ENST00000635970 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
CLN8-209ENST00000635970 FAM104AQ969W3 186 aa11.07□□□□□ -0.64
CLN8-209ENST00000635970 DNAJC30Q96LL9 226 aa11.07□□□□□ -0.64
CLN8-209ENST00000635970 TEX49A0A1B0GTD5 131 aa11.07□□□□□ -0.64
CLN8-209ENST00000635970 NBEAL2Q6ZNJ1 2754 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 H7C423 109 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 LST1O00453 97 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 NHLRC4P0CG21 123 aaPredicted RBP11.06□□□□□ -0.64
CLN8-209ENST00000635970 COPS9Q8WXC6 57 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
CLN8-209ENST00000635970 TRAV4A0A0B4J268 109 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE12JA6NER3 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 A8MTW9 85 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE7O76087 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE12FP0CL80 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE12GP0CL81 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE12IP0CL82 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 TIRAPP58753 221 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 GAGE4Q13068 117 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 STHQ8IWL8 128 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 RETNQ9HD89 108 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 UBE2D4Q9Y2X8 147 aa11.05□□□□□ -0.64
CLN8-209ENST00000635970 CIRBPQ14011 172 aaKnown RBP11.04□□□□□ -0.64
CLN8-209ENST00000635970 ADAMTSL4-AS1Q5T5F5 129 aa11.04□□□□□ -0.64
CLN8-209ENST00000635970 C15orf53Q8NAA6 179 aa11.04□□□□□ -0.64
CLN8-209ENST00000635970 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
CLN8-209ENST00000635970 ACYP1P07311 99 aa11.03□□□□□ -0.64
CLN8-209ENST00000635970 TM2D3Q9BRN9 247 aa11.03□□□□□ -0.64
CLN8-209ENST00000635970 CHCHD7Q9BUK0 85 aa11.03□□□□□ -0.64
CLN8-209ENST00000635970 IGLV5-45A0A087WSX0 123 aa11.02□□□□□ -0.65
CLN8-209ENST00000635970 NDUFA1O15239 70 aa11.02□□□□□ -0.65
CLN8-209ENST00000635970 ZNF415Q09FC8 603 aa11.02□□□□□ -0.65
CLN8-209ENST00000635970 LINC00467Q9BRT7 94 aa11.02□□□□□ -0.65
CLN8-209ENST00000635970 APOC4P55056 127 aa11.01□□□□□ -0.65
CLN8-209ENST00000635970 PPDPFQ9H3Y8 114 aa11.01□□□□□ -0.65
CLN8-209ENST00000635970 DEFB135Q30KP9 77 aa11□□□□□ -0.65
CLN8-209ENST00000635970 IMUPQ9GZP8 106 aa10.99□□□□□ -0.65
CLN8-209ENST00000635970 B5MCH6 92 aa10.99□□□□□ -0.65
CLN8-209ENST00000635970 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
CLN8-209ENST00000635970 KIR2DL5BQ8NHK3 375 aa10.99□□□□□ -0.65
CLN8-209ENST00000635970 GIG44P09565 113 aaPredicted RBP10.98□□□□□ -0.65
CLN8-209ENST00000635970 FAM19A3Q7Z5A8 133 aa10.98□□□□□ -0.65
CLN8-209ENST00000635970 TRBV7-7A0A0K0K1E9 115 aa10.97□□□□□ -0.65
CLN8-209ENST00000635970 HERVK_113P63121 156 aa10.97□□□□□ -0.65
CLN8-209ENST00000635970 CEMP1Q6PRD7 247 aaPredicted RBP10.97□□□□□ -0.65
CLN8-209ENST00000635970 RBMY1A1P0DJD3 496 aaKnown RBP10.97□□□□□ -0.65
CLN8-209ENST00000635970 RBMY1CP0DJD4 496 aa10.97□□□□□ -0.65
CLN8-209ENST00000635970 RBMY1FQ15415 496 aaKnown RBP10.97□□□□□ -0.65
CLN8-209ENST00000635970 IGHV3-73A0A0B4J1V6 119 aa10.96□□□□□ -0.65
CLN8-209ENST00000635970 OVOL2Q9BRP0 275 aa10.96□□□□□ -0.65
CLN8-209ENST00000635970 SS18L2Q9UHA2 77 aa10.96□□□□□ -0.65
CLN8-209ENST00000635970 CLEC2BQ92478 149 aa10.96□□□□□ -0.66
CLN8-209ENST00000635970 TMEM101Q96IK0 257 aa10.96□□□□□ -0.66
CLN8-209ENST00000635970 IGLV5-39A0A0G2JS06 123 aa10.95□□□□□ -0.66
CLN8-209ENST00000635970 XCL2Q9UBD3 114 aa10.95□□□□□ -0.66
CLN8-209ENST00000635970 STAB2Q8WWQ8 2551 aa10.95□□□□□ -0.66
CLN8-209ENST00000635970 COX7A2LO14548 114 aa10.94□□□□□ -0.66
CLN8-209ENST00000635970 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
CLN8-209ENST00000635970 LINC00308Q8TCZ7 52 aa10.94□□□□□ -0.66
CLN8-209ENST00000635970 CDKN2A-AS1Q9UH64 79 aa10.94□□□□□ -0.66
CLN8-209ENST00000635970 CSDC2Q9Y534 153 aaKnown RBP10.94□□□□□ -0.66
CLN8-209ENST00000635970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.94□□□□□ -0.66
CLN8-209ENST00000635970 IGKV2-29A2NJV5 120 aaPredicted RBP10.94□□□□□ -0.66
CLN8-209ENST00000635970 RS1O15537 224 aa10.94□□□□□ -0.66
CLN8-209ENST00000635970 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
CLN8-209ENST00000635970 HTN1P15515 57 aa10.93□□□□□ -0.66
CLN8-209ENST00000635970 DNAH7Q8WXX0 4024 aa10.93□□□□□ -0.66
CLN8-209ENST00000635970 TRACP01848 142 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 CSNK1G2-AS1Q8NCQ2 148 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 CCDC179H3BU77 68 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 NPC2P61916 151 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 HERV-K104P63124 156 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 Q6ZSN1 163 aa10.92□□□□□ -0.66
CLN8-209ENST00000635970 C11orf72Q8NBR9 251 aa10.91□□□□□ -0.66
CLN8-209ENST00000635970 INSP01308 110 aa10.9□□□□□ -0.66
CLN8-209ENST00000635970 LINC01587Q99440 93 aa10.9□□□□□ -0.66
CLN8-209ENST00000635970 Q9H8V8 135 aa10.9□□□□□ -0.66
CLN8-209ENST00000635970 IGHV3OR16-12A0A075B7B8 117 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 TRBV10-1A0A0K0K1A3 114 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 ATP5G1P05496 136 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 LINC00242Q5T6M2 205 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 LINC00643Q86TS7 51 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 TMEM126AQ9H061 195 aa10.88□□□□□ -0.67
CLN8-209ENST00000635970 NACAE9PAV3 2078 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms