RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ERG28Q9UKR5 140 aa8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 CSNK1G2-AS1Q8NCQ2 148 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 A0A1W2PPM0 123 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 SNCGO76070 127 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 SH2D6Q7Z4S9 175 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 NAA38Q9BRA0 125 aaKnown RBP8.84□□□□□ -0.99
SYNGAP1-207ENST00000628646 H7C2G1 150 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 IGLV4-3A0A075B6K6 122 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 K7EP34 96 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 PSCAO43653 123 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 EDA2RQ9HAV5 297 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 NFE4Q86UQ8 179 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 FAM104AQ969W3 186 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 PGPEP1Q9NXJ5 209 aa8.83□□□□□ -1
SYNGAP1-207ENST00000628646 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 NUPR2A6NF83 97 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 IGHV3-30P01768 117 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 IGHV3-33P01772 117 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 K7ERJ3 54 aa8.82□□□□□ -1
SYNGAP1-207ENST00000628646 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
SYNGAP1-207ENST00000628646 SS18Q15532 418 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 CLPSL2Q6UWE3 100 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 Q9HAA7 133 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 TINCRA0A1B0GVN0 87 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 VSIG2Q96IQ7 327 aa8.81□□□□□ -1
SYNGAP1-207ENST00000628646 H7C423 109 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 A0A1B0GWB2 263 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 LY6G6CO95867 125 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 C11orf68Q9H3H3 251 aaKnown RBP8.8□□□□□ -1
SYNGAP1-207ENST00000628646 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 C15orf53Q8NAA6 179 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 AMELXQ99217 191 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
SYNGAP1-207ENST00000628646 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
SYNGAP1-207ENST00000628646 IGHV1-58A0A0C4DH39 117 aa8.79□□□□□ -1
SYNGAP1-207ENST00000628646 RNASE13Q5GAN3 156 aaKnown RBP8.79□□□□□ -1
SYNGAP1-207ENST00000628646 IFITM1P13164 125 aa8.79□□□□□ -1
SYNGAP1-207ENST00000628646 UBE2WQ96B02 151 aa8.79□□□□□ -1
SYNGAP1-207ENST00000628646 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
SYNGAP1-207ENST00000628646 MRPS36P82909 103 aaKnown RBP8.78□□□□□ -1
SYNGAP1-207ENST00000628646 FHL2Q14192 279 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 SPINK8P0C7L1 97 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 TMEM223A0PJW6 202 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 TIRAPP58753 221 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 TSPEAR-AS2P59090 65 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 OCIAD2Q56VL3 154 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 GTSF1LQ9H1H1 148 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 Q9UF83 564 aa8.78□□□□□ -1
SYNGAP1-207ENST00000628646 RPL13AP40429 203 aaKnown RBP8.77□□□□□ -1
SYNGAP1-207ENST00000628646 HERV-K104P63124 156 aa8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 SPANXB1Q9NS25 103 aaPredicted RBP8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 STAB2Q8WWQ8 2551 aa8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 SFTA2Q6UW10 78 aa8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 Q6ZUT4 128 aa8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 MUC7Q8TAX7 377 aa8.77□□□□□ -1.01
SYNGAP1-207ENST00000628646 F8W1H4 67 aa8.76□□□□□ -1.01
SYNGAP1-207ENST00000628646 MALP21145 153 aa8.76□□□□□ -1.01
SYNGAP1-207ENST00000628646 IGKV2D-24A0A075B6R9 120 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 A0A1B0GV72 72 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 C6orf226Q5I0X4 101 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 Q6ZSN1 163 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 KLK12Q9UKR0 248 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 M0R2N4 97 aa8.75□□□□□ -1.01
SYNGAP1-207ENST00000628646 CEMP1Q6PRD7 247 aaPredicted RBP8.74□□□□□ -1.01
SYNGAP1-207ENST00000628646 LINC00158P58513 81 aa8.74□□□□□ -1.01
SYNGAP1-207ENST00000628646 PKD1L1Q8TDX9 2849 aa8.74□□□□□ -1.01
SYNGAP1-207ENST00000628646 UBE2D3P61077 147 aa8.74□□□□□ -1.01
SYNGAP1-207ENST00000628646 UBE2D2P62837 147 aa8.74□□□□□ -1.01
SYNGAP1-207ENST00000628646 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
SYNGAP1-207ENST00000628646 CKS1BP61024 79 aa8.73□□□□□ -1.01
SYNGAP1-207ENST00000628646 UBE2D1P51668 147 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 CFC1P0CG37 223 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 DPH3Q96FX2 82 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 Q9H8V8 135 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 SS18L2Q9UHA2 77 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 MUSTN1Q8IVN3 82 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 CHCHD7Q9BUK0 85 aa8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 CSDC2Q9Y534 153 aaKnown RBP8.72□□□□□ -1.01
SYNGAP1-207ENST00000628646 A4D1N5 150 aa8.71□□□□□ -1.01
SYNGAP1-207ENST00000628646 TRBV6-8A0A0A6YYG3 113 aa8.71□□□□□ -1.02
SYNGAP1-207ENST00000628646 A0A0J9YXY3 114 aa8.71□□□□□ -1.02
SYNGAP1-207ENST00000628646 C1orf43Q9BWL3 253 aa8.71□□□□□ -1.02
SYNGAP1-207ENST00000628646 PLAC8L1A1L4L8 177 aa8.7□□□□□ -1.02
SYNGAP1-207ENST00000628646 RMI2Q96E14 147 aa8.7□□□□□ -1.02
SYNGAP1-207ENST00000628646 TRAV8-3A0A0A6YYJ7 113 aa8.7□□□□□ -1.02
SYNGAP1-207ENST00000628646 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
SYNGAP1-207ENST00000628646 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
SYNGAP1-207ENST00000628646 CDKN2A-AS1Q9UH64 79 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms